| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is ald [H]
Identifier: 78043495
GI number: 78043495
Start: 578428
End: 579546
Strand: Direct
Name: ald [H]
Synonym: CHY_0666
Alternate gene names: 78043495
Gene position: 578428-579546 (Clockwise)
Preceding gene: 78043971
Following gene: 78042901
Centisome position: 24.09
GC content: 49.96
Gene sequence:
>1119_bases ATGATTATTGGTGTACCAAAAGAAATTAAAAATAATGAAAACCGGGTGGCGATTACTCCTGCCGGAGTTGAGGCTTTGGT TGCGGCGGGGCATAAAGTGGTGATTGAAAATAACGCCGGTCTTGGCAGCGGGATAACCAATGAAGAATACATAAAAGCTG GGGCGGAAATTCTTCCAACTGCTGCCGATGTCTTTGCTGCTGCAGATATGATTATGAAGGTAAAGGAGCCACTGCCACCG GAATACCCGTTATTTAAGGAAGGGCAAATTCTCTTTACTTATCTTCATCTCGCGCCGGAGCCGGAACTTACCCGGGCTTT AATGGAGAAAAAGGTTGTAGCTATTGCTTACGAAACCATTCAGCTTCCCAACGGCAGCCTGCCATTACTAACTCCAATGA GCGAGGTTGCCGGGCGGATGGCGGTCCAGATCGGTGCTCGTTTCCTGGAAAAGCCTCAGGGCGGTCGGGGTATGCTATTG GGGGGCGTTCCCGGAGTTCCACCGGCCGAAGTGGTGATTATTGGTGGCGGTGTCGTCGGTACCAATGCTGCTAAGATGGC TATGGGCATGGGAGCTCACGTGACCATTCTTGATAAGAGTGCCGACCGGCTTAGATACCTGGATGATATCTTTTTCGGCA AAATAACCACCATGATGTCCAACAGCTACAATATTGCCGAAGCGGTGAAAAAAGCTGACTTATTGATCGGCGCCGTCTTA ATTCCGGGAGCCCGGGCGCCCAAATTGGTAACGGAAGAGATGGTTAAGACCATGAAACCCGGTTCGGTTATCGTTGACGT GGCTATTGACCAGGGTGGTTGCGTCGAAACTATTGACCGGGTAACTACCCACCAGGATCCGATTTACGTTAAACACGGAG TTGTCCATTATGCTGTAGCCAACATGCCCGGTGCCGTACCGAGAACTTCAACTTTTGCTTTAACCAACGTGACCTTGCCG TATGCTTTGGCTATTGCCAATAAAGGCTGGGAGCGGGCGGTAAGGGAAGACCGGGCTTTAGCTTTAGGCGTTAACGTTTT AGACGGAAAAGTTACCTGTAAAGCGGTAGCCGATTCTTTGGGCTTACCTTATACTCCGCTGGAAGAAATCCTCGGTTAG
Upstream 100 bases:
>100_bases TTTTTAACGCCAACTGATATTGGTACGAAAATTGCTTAAAATAAATATAGCATAAAAATAGCATTTGTTTTAACATAAAA AATTTGGGGGTGAATTTTGC
Downstream 100 bases:
>100_bases AGGTAAAAGGGGTGGATAATTCCACCCCTTTGCTATATCATTAACATTAAAAAAGAAAAGTTTTCTGGTAGGTGGAAAAA ATGCGTCCGGTATGGGCAGA
Product: alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MIIGVPKEIKNNENRVAITPAGVEALVAAGHKVVIENNAGLGSGITNEEYIKAGAEILPTAADVFAAADMIMKVKEPLPP EYPLFKEGQILFTYLHLAPEPELTRALMEKKVVAIAYETIQLPNGSLPLLTPMSEVAGRMAVQIGARFLEKPQGGRGMLL GGVPGVPPAEVVIIGGGVVGTNAAKMAMGMGAHVTILDKSADRLRYLDDIFFGKITTMMSNSYNIAEAVKKADLLIGAVL IPGARAPKLVTEEMVKTMKPGSVIVDVAIDQGGCVETIDRVTTHQDPIYVKHGVVHYAVANMPGAVPRTSTFALTNVTLP YALAIANKGWERAVREDRALALGVNVLDGKVTCKAVADSLGLPYTPLEEILG
Sequences:
>Translated_372_residues MIIGVPKEIKNNENRVAITPAGVEALVAAGHKVVIENNAGLGSGITNEEYIKAGAEILPTAADVFAAADMIMKVKEPLPP EYPLFKEGQILFTYLHLAPEPELTRALMEKKVVAIAYETIQLPNGSLPLLTPMSEVAGRMAVQIGARFLEKPQGGRGMLL GGVPGVPPAEVVIIGGGVVGTNAAKMAMGMGAHVTILDKSADRLRYLDDIFFGKITTMMSNSYNIAEAVKKADLLIGAVL IPGARAPKLVTEEMVKTMKPGSVIVDVAIDQGGCVETIDRVTTHQDPIYVKHGVVHYAVANMPGAVPRTSTFALTNVTLP YALAIANKGWERAVREDRALALGVNVLDGKVTCKAVADSLGLPYTPLEEILG >Mature_372_residues MIIGVPKEIKNNENRVAITPAGVEALVAAGHKVVIENNAGLGSGITNEEYIKAGAEILPTAADVFAAADMIMKVKEPLPP EYPLFKEGQILFTYLHLAPEPELTRALMEKKVVAIAYETIQLPNGSLPLLTPMSEVAGRMAVQIGARFLEKPQGGRGMLL GGVPGVPPAEVVIIGGGVVGTNAAKMAMGMGAHVTILDKSADRLRYLDDIFFGKITTMMSNSYNIAEAVKKADLLIGAVL IPGARAPKLVTEEMVKTMKPGSVIVDVAIDQGGCVETIDRVTTHQDPIYVKHGVVHYAVANMPGAVPRTSTFALTNVTLP YALAIANKGWERAVREDRALALGVNVLDGKVTCKAVADSLGLPYTPLEEILG
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=386, Percent_Identity=31.6062176165803, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI122939153, Length=386, Percent_Identity=31.6062176165803, Blast_Score=156, Evalue=4e-38, Organism=Escherichia coli, GI1787887, Length=379, Percent_Identity=31.3984168865435, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17550456, Length=373, Percent_Identity=32.171581769437, Blast_Score=159, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 39377; Mature: 39377
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGVPKEIKNNENRVAITPAGVEALVAAGHKVVIENNAGLGSGITNEEYIKAGAEILPT CEECCCHHHCCCCCEEEEECCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCHHHCCC AADVFAAADMIMKVKEPLPPEYPLFKEGQILFTYLHLAPEPELTRALMEKKVVAIAYETI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEEEEE QLPNGSLPLLTPMSEVAGRMAVQIGARFLEKPQGGRGMLLGGVPGVPPAEVVIIGGGVVG ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCEEC TNAAKMAMGMGAHVTILDKSADRLRYLDDIFFGKITTMMSNSYNIAEAVKKADLLIGAVL CCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEHEE IPGARAPKLVTEEMVKTMKPGSVIVDVAIDQGGCVETIDRVTTHQDPIYVKHGVVHYAVA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEEEEC NMPGAVPRTSTFALTNVTLPYALAIANKGWERAVREDRALALGVNVLDGKVTCKAVADSL CCCCCCCCCCEEEEEECCHHEEEEECCCCHHHHHHHCCEEEEEEEEECCCEEHHHHHHHC GLPYTPLEEILG CCCCCCHHHHCC >Mature Secondary Structure MIIGVPKEIKNNENRVAITPAGVEALVAAGHKVVIENNAGLGSGITNEEYIKAGAEILPT CEECCCHHHCCCCCEEEEECCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCHHHCCC AADVFAAADMIMKVKEPLPPEYPLFKEGQILFTYLHLAPEPELTRALMEKKVVAIAYETI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEEEEE QLPNGSLPLLTPMSEVAGRMAVQIGARFLEKPQGGRGMLLGGVPGVPPAEVVIIGGGVVG ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCEEC TNAAKMAMGMGAHVTILDKSADRLRYLDDIFFGKITTMMSNSYNIAEAVKKADLLIGAVL CCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEHEE IPGARAPKLVTEEMVKTMKPGSVIVDVAIDQGGCVETIDRVTTHQDPIYVKHGVVHYAVA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEEEEC NMPGAVPRTSTFALTNVTLPYALAIANKGWERAVREDRALALGVNVLDGKVTCKAVADSL CCCCCCCCCCEEEEEECCHHEEEEECCCCHHHHHHHCCEEEEEEEEECCCEEHHHHHHHC GLPYTPLEEILG CCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]