Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is yjeF [C]

Identifier: 78043971

GI number: 78043971

Start: 576662

End: 578236

Strand: Direct

Name: yjeF [C]

Synonym: CHY_0665

Alternate gene names: 78043971

Gene position: 576662-578236 (Clockwise)

Preceding gene: 78044717

Following gene: 78043495

Centisome position: 24.01

GC content: 45.46

Gene sequence:

>1575_bases
ATGCTTCTTTTAACCGGGCGGGAGATGGCGGAGTTTGACCAGAAAGCGATTAATGAATACGGGATTCCGGGAATTGTTTT
AATGGAAAATGCGGCTTTAAAGACTTTTTATAGAATTAAAGAGATTTTGGGAGATGTTAGCGGCAAAAAAATTATCATCT
TAGTGGGAAAGGGAAATAACGGTGGTGATGGTCTGGCCCTTGCCCGGCACCTGGCCAATGCCGGGGCTAAAATCCGGGTG
TTTTTACTGTTTAAAGATAATTTTAAAGGAGATGCTTTAATTAATTTTAATATTTTAAAGAAAATGAGTGAAAAAATCTA
TGAAGGGATTACCGAAAATTTAAACCTTTTAAAAATCTCCCTGATTGATGCCGATATGGTGGTGGATGCGATATACGGCA
CCGGTTTTCGGGGGGCGCTACCGCCGGAAATCCGGGAAGTGGTGGAGATTGTCAACCAGGCGGATGCAGTTAGGCTGGCG
GTGGATATCCCTTCGGGGGTAGACGCCAGCACCGGCCAGGTCGAAGGCGTTGCCTTTCAGGCCGACTATACGGTAACCTT
CGGGTTACCCAAAGTGGGGCAAATCCTTTTTCCCGGGCGAAAATACTGCGGGGAAATTTACGTGGAGGATATTTCTTTTC
CGGAAAAACTAAAAAAAGAGTTTTCTGTTCGGCGCTGGCTTATTGAAGAAAAGCTAATTAAAAAAATCATAAAGCCGGTG
GCAGCGGATACCCATAAAGGCCGGCAGGGTTTTACGCTGGTAGCAGGAGGGTCGCGTGCTTACTCTGGAGCTCCTCTTCT
TTCTGCAAGAGGATGTTTAGCGTCCGGGGTGGGAGGGGTTTACCTGGCGGTACCGGAAGAGTTATTTGAACCTTTAGCGG
GTAAGGTACCGGAAATTATTTTACGGGGAATACCGGCAGCAGCCGGGCAACTGGCGGCGGAAGGTTTTTTTATGCTCAGT
GAACTTCTTTCTAAAGTAAAGGCGGCGGTTATAGGACCGGGAATGGGGGAGTTAACCGGAAGTAAAGAAGCTTATCTTAA
TTTTTTGGAAAGCTGTCCTTTGCCGCTGGTGATTGATGCCGACGGTTTAAATAATCTTGTTGGTTATCTGGAGGTTTTAA
AAAGGCGAACGGCTCCTACGGTTTTAACTCCCCATTTGGGCGAAATGGCAAGGCTTCTTGGGCTGAGTGTTAACGAAGTA
AAGGTAAAGGGTGAAGAAATTAGCAAAGAGTTTACAAAAGAATATAATGTTTACCTGGTTTTAAAAAGTGAAACCACTTT
AATTGCCGCGCCAACTGGGGAAGTCTGGTACCTGGCCGGGGGCAATCCCCTTTTAGCCAAAGCCGGCAGCGGCGATGTTT
TGTCTGGCTTAATTGCCGGTTTTTTAACCCAGGGTTATGGTCCGGAGGAAGCAGCGATTTTGGGGGTTTATTTTCACGGA
AGAGCTGGAGAACTGGCATTAAAGGAACGGGCGGTAAACAGCTTTTTTATTTCCGATATTTTTTCTTATTTAAATGAAGT
TTTCCGGGAAGTAGGGGGTAATGGTGGAAAGAAAAATATCCATATGGAAAGATAA

Upstream 100 bases:

>100_bases
GCAAAAATTTTTCAGGAAAAAGGTTTTACGGGAAAAAGCTTAAGTTTAAGCCATGAAAAAAAGGTAGCGGTAGCAATTTG
CGTGATGTGGAGGGATTAAA

Downstream 100 bases:

>100_bases
TTTTCCACGATTTATAAAGTTTTGTTTGAACTTATAACAGACTGGAAAGTTTTATTTCCAGTCTGTTATTTTTTTAGGGA
ATTTTCGAGGTTTTTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV
FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA
VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV
AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS
ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV
KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG
RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER

Sequences:

>Translated_524_residues
MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV
FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA
VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV
AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS
ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV
KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG
RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER
>Mature_524_residues
MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNNGGDGLALARHLANAGAKIRV
FLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKISLIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLA
VDIPSGVDASTGQVEGVAFQADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV
AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEIILRGIPAAAGQLAAEGFFMLS
ELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDADGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEV
KVKGEEISKEFTKEYNVYLVLKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG
RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI91984773, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1790609, Length=496, Percent_Identity=30.8467741935484, Blast_Score=189, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17554656, Length=311, Percent_Identity=25.7234726688103, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI221329809, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 56443; Mature: 56443

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNN
CEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
GGDGLALARHLANAGAKIRVFLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKIS
CCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEE
LIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLAVDIPSGVDASTGQVEGVAFQ
EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEE
ADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV
ECEEEEECCCCCCCEECCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEII
HCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCCCEEEECCHHHHHHHHCCCHHHH
LRGIPAAAGQLAAEGFFMLSELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
DGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEVKVKGEEISKEFTKEYNVYLV
CCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEEE
LKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG
EECCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLLLTGREMAEFDQKAINEYGIPGIVLMENAALKTFYRIKEILGDVSGKKIIILVGKGNN
CEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
GGDGLALARHLANAGAKIRVFLLFKDNFKGDALINFNILKKMSEKIYEGITENLNLLKIS
CCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEE
LIDADMVVDAIYGTGFRGALPPEIREVVEIVNQADAVRLAVDIPSGVDASTGQVEGVAFQ
EECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEE
ADYTVTFGLPKVGQILFPGRKYCGEIYVEDISFPEKLKKEFSVRRWLIEEKLIKKIIKPV
ECEEEEECCCCCCCEECCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADTHKGRQGFTLVAGGSRAYSGAPLLSARGCLASGVGGVYLAVPEELFEPLAGKVPEII
HCCCCCCCCCEEEEECCCCCCCCCCCHHHCCHHHCCCCCEEEECCHHHHHHHHCCCHHHH
LRGIPAAAGQLAAEGFFMLSELLSKVKAAVIGPGMGELTGSKEAYLNFLESCPLPLVIDA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
DGLNNLVGYLEVLKRRTAPTVLTPHLGEMARLLGLSVNEVKVKGEEISKEFTKEYNVYLV
CCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEEE
LKSETTLIAAPTGEVWYLAGGNPLLAKAGSGDVLSGLIAGFLTQGYGPEEAAILGVYFHG
EECCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
RAGELALKERAVNSFFISDIFSYLNEVFREVGGNGGKKNIHMER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]