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The map label for this gene is fdhC [H]

Identifier: 78043447

GI number: 78043447

Start: 320366

End: 321268

Strand: Direct

Name: fdhC [H]

Synonym: CHY_0374

Alternate gene names: 78043447

Gene position: 320366-321268 (Clockwise)

Preceding gene: 78044754

Following gene: 78044429

Centisome position: 13.34

GC content: 39.65

Gene sequence:

>903_bases
ATGGAAAAAAACTTTTTAACACCCCAGGAAATCGTCAACTTCACCTTAGAAACTGGAATCAAAAAAGCAAAGCTTAACTT
TTTAGCTTCTTTTATCCTTGGGATTTTAGCGGGTAGTTATATTGCTTTTGGAGCGTTTGCTGCCAATTTAATTAGTCATT
CGGTGGAAAACTTTGGCATTGCCAAATTTTTAGGGGCGGCTGTTTTCCCGGTGGGATTAATGTTAGTGGTAATGGCCGGT
GGTGAACTTTTTACCGGGAATACTTTAATGACTATTGCTCTTGCCGAAAGAAAGATTACCTTAAAAGCAATGTTAAATAA
CTGGTTATGGGTTTATGCTGGCAATTTTGTTGGTTCTTTTTTAGTGGCATACCTGGTGGGAAGGTCCGGTATGTTAGAGT
TAAATAAAGGGTTAGTAGCAGCTGCAGCGCTTAGGACGGCAGCTCTAAAAGCAAATCTGACCTTCAGCGAGGCGTTTATT
CGGGGAATTTTGTGTAATATTTTGGTGGTTTTAGCGGTGTGGCTTGCCTATGGAGCAAAGGATGTAGTAGGGAAAGTAGT
TGGAATCTGGTTTCCCATAATGACGTTTGTCCTTTCCGGTTATGAACACAGCATTGCTAATATGTATTATTTTGCTGTAG
GACTTCAGGCCAAAGCTTTGGGAGTTGCCAAACTTGCTCATTTAAAATCAGAGTTTTTAACAAATTTAAACTGGGGACAT
ATCTGGCTTTATAATCTGATTCCGGTGACCCTTGGGAATATTTTTGGGGGTAGCATTTTAATTGGCCTTGGTTACTGGCT
GGTTTACCTCTATTTGCCGCGGGTTAATGAACTCTCCTTGGCTGGTCTTTTAAAGAAATTTATCTTTGGAGTTGAAAAAC
CAAAACTTCAGGAAAATAACTAA

Upstream 100 bases:

>100_bases
CGTAAATCTTTTAAAAAATACAAAATTTTTAAGGGCTGTGTTTTTATTTATGGTAAAAAGTGAAAATAGTCACAAGATTT
ACTACAGGAGGGACATAGTA

Downstream 100 bases:

>100_bases
CAGCGGAGGGCAAAAACCTCCGCTTATTTTTAAGTTTTTGGGAGGAATTTTGCTTTTTTTAGCGAATAATATATCAAAAA
AGACATAATATATTTGGAGG

Product: formate/nitrite transporter family protein

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEKNFLTPQEIVNFTLETGIKKAKLNFLASFILGILAGSYIAFGAFAANLISHSVENFGIAKFLGAAVFPVGLMLVVMAG
GELFTGNTLMTIALAERKITLKAMLNNWLWVYAGNFVGSFLVAYLVGRSGMLELNKGLVAAAALRTAALKANLTFSEAFI
RGILCNILVVLAVWLAYGAKDVVGKVVGIWFPIMTFVLSGYEHSIANMYYFAVGLQAKALGVAKLAHLKSEFLTNLNWGH
IWLYNLIPVTLGNIFGGSILIGLGYWLVYLYLPRVNELSLAGLLKKFIFGVEKPKLQENN

Sequences:

>Translated_300_residues
MEKNFLTPQEIVNFTLETGIKKAKLNFLASFILGILAGSYIAFGAFAANLISHSVENFGIAKFLGAAVFPVGLMLVVMAG
GELFTGNTLMTIALAERKITLKAMLNNWLWVYAGNFVGSFLVAYLVGRSGMLELNKGLVAAAALRTAALKANLTFSEAFI
RGILCNILVVLAVWLAYGAKDVVGKVVGIWFPIMTFVLSGYEHSIANMYYFAVGLQAKALGVAKLAHLKSEFLTNLNWGH
IWLYNLIPVTLGNIFGGSILIGLGYWLVYLYLPRVNELSLAGLLKKFIFGVEKPKLQENN
>Mature_300_residues
MEKNFLTPQEIVNFTLETGIKKAKLNFLASFILGILAGSYIAFGAFAANLISHSVENFGIAKFLGAAVFPVGLMLVVMAG
GELFTGNTLMTIALAERKITLKAMLNNWLWVYAGNFVGSFLVAYLVGRSGMLELNKGLVAAAALRTAALKANLTFSEAFI
RGILCNILVVLAVWLAYGAKDVVGKVVGIWFPIMTFVLSGYEHSIANMYYFAVGLQAKALGVAKLAHLKSEFLTNLNWGH
IWLYNLIPVTLGNIFGGSILIGLGYWLVYLYLPRVNELSLAGLLKKFIFGVEKPKLQENN

Specific function: May act as a formate transporter [H]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=286, Percent_Identity=36.7132867132867, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1788837, Length=255, Percent_Identity=30.1960784313725, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI87082249, Length=282, Percent_Identity=31.5602836879433, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6321779, Length=306, Percent_Identity=27.7777777777778, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 32712; Mature: 32712

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS01005 FORMATE_NITRITE_TP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNFLTPQEIVNFTLETGIKKAKLNFLASFILGILAGSYIAFGAFAANLISHSVENFGI
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AKFLGAAVFPVGLMLVVMAGGELFTGNTLMTIALAERKITLKAMLNNWLWVYAGNFVGSF
HHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEHHHHHHHHHHHHCCEEEEEHHHHHHH
LVAYLVGRSGMLELNKGLVAAAALRTAALKANLTFSEAFIRGILCNILVVLAVWLAYGAK
HHHHHHCCCCCCHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
DVVGKVVGIWFPIMTFVLSGYEHSIANMYYFAVGLQAKALGVAKLAHLKSEFLTNLNWGH
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
IWLYNLIPVTLGNIFGGSILIGLGYWLVYLYLPRVNELSLAGLLKKFIFGVEKPKLQENN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEKNFLTPQEIVNFTLETGIKKAKLNFLASFILGILAGSYIAFGAFAANLISHSVENFGI
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AKFLGAAVFPVGLMLVVMAGGELFTGNTLMTIALAERKITLKAMLNNWLWVYAGNFVGSF
HHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEHHHHHHHHHHHHCCEEEEEHHHHHHH
LVAYLVGRSGMLELNKGLVAAAALRTAALKANLTFSEAFIRGILCNILVVLAVWLAYGAK
HHHHHHCCCCCCHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
DVVGKVVGIWFPIMTFVLSGYEHSIANMYYFAVGLQAKALGVAKLAHLKSEFLTNLNWGH
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
IWLYNLIPVTLGNIFGGSILIGLGYWLVYLYLPRVNELSLAGLLKKFIFGVEKPKLQENN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]