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The map label for this gene is 78044754

Identifier: 78044754

GI number: 78044754

Start: 318521

End: 318904

Strand: Direct

Name: 78044754

Synonym: CHY_0372

Alternate gene names: NA

Gene position: 318521-318904 (Clockwise)

Preceding gene: 78043508

Following gene: 78043447

Centisome position: 13.26

GC content: 37.76

Gene sequence:

>384_bases
ATGAACTTAACTACCATACGCCGATATGCCCTGGATATTTTAGATAATATTAACGATGGGGTGTTTGTTACTAACAAAAA
GCGGAAAATTATCTATTGGAATAAGGCGGCAGTAGAAATTACCGGAAAGACCAGAAAAGAAGTTTTAAATAAAAGCTGCT
ATGAAGTGATGAACTTTCCGCAAAACGACCAGGGAAAGTGCCTTTGCGAAAATAACTGTCCCCTTTTATCAACCATTAAA
GAGGGAAAAGCGATAAAACGGTATAGAACGATTTTTACGAAAGGCGAAGAAAAAATAACGTTAGAAGTTTCTACCTCACC
AATTATCAATCCCCTTGGACAGGTGTTAGGCGGGGTAGCAGTTTTCCGGGAAATTAAAGATTAA

Upstream 100 bases:

>100_bases
ACCGGCGGGGATTTTAATATAAAAACTGTTTATGGTAATAGTAATTTTAATAACTAACAAAATCCCGGCATAGTGATATA
ATTTATATGAGGTGTCCTTT

Downstream 100 bases:

>100_bases
AATAAAAAGGTTGGGTGATTTTCCCAACCTTTTTTAATTTCTTTTCAGGGCCCAGGGTAAGAGCAGTACCGCCAAAAGAG
CCATCATGCTGCCAAAGTAA

Product: sensory box protein

Products: NA

Alternate protein names: PAS Modulated; PAS Domain-Containing Sensor Diguanylate Cyclase; PAS Sensory Box/GGDEF Family Protein; GGDEF Domain-Containing Protein; PAS/PAC Sensors-Containing Diguanylate Cyclase; Sensory Box Protein; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulatory Protein; Signaling Protein; Sensory Box/Ggdef Family Protein; PAS/PAC Sensor Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNLTTIRRYALDILDNINDGVFVTNKKRKIIYWNKAAVEITGKTRKEVLNKSCYEVMNFPQNDQGKCLCENNCPLLSTIK
EGKAIKRYRTIFTKGEEKITLEVSTSPIINPLGQVLGGVAVFREIKD

Sequences:

>Translated_127_residues
MNLTTIRRYALDILDNINDGVFVTNKKRKIIYWNKAAVEITGKTRKEVLNKSCYEVMNFPQNDQGKCLCENNCPLLSTIK
EGKAIKRYRTIFTKGEEKITLEVSTSPIINPLGQVLGGVAVFREIKD
>Mature_127_residues
MNLTTIRRYALDILDNINDGVFVTNKKRKIIYWNKAAVEITGKTRKEVLNKSCYEVMNFPQNDQGKCLCENNCPLLSTIK
EGKAIKRYRTIFTKGEEKITLEVSTSPIINPLGQVLGGVAVFREIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14440; Mature: 14440

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTIRRYALDILDNINDGVFVTNKKRKIIYWNKAAVEITGKTRKEVLNKSCYEVMNFP
CCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHCCC
QNDQGKCLCENNCPLLSTIKEGKAIKRYRTIFTKGEEKITLEVSTSPIINPLGQVLGGVA
CCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
VFREIKD
HHHHHCC
>Mature Secondary Structure
MNLTTIRRYALDILDNINDGVFVTNKKRKIIYWNKAAVEITGKTRKEVLNKSCYEVMNFP
CCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHCCC
QNDQGKCLCENNCPLLSTIKEGKAIKRYRTIFTKGEEKITLEVSTSPIINPLGQVLGGVA
CCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
VFREIKD
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA