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The map label for this gene is hdrB2 [H]

Identifier: 78043435

GI number: 78043435

Start: 55194

End: 56057

Strand: Direct

Name: hdrB2 [H]

Synonym: CHY_0065

Alternate gene names: 78043435

Gene position: 55194-56057 (Clockwise)

Preceding gene: 78044013

Following gene: 78043041

Centisome position: 2.3

GC content: 40.28

Gene sequence:

>864_bases
ATGAAATATGCATTTTTTCCTGGATGCGTTTTGCAAGGGGCAAGTGAAGAAGCGTATATAGCAACGATAAAAGTCGCAAA
TGCCTTAGGAATAGAATTAGTGGAAATTCCGGGGTGGACTTGTTGCGGAGGTTCCCACCTTCAGGATTACGATGGAACGG
TTGCTTTAGCAGTTAATGCGAGAAATATTGCTTTGGCAGAGAAGATGAACCTGCCGATTCTTACTGTATGTAGCACTTGC
ACGTTAATGTTGAGGGAGGCTAAGCATAAGCTGGATAATGGTAAAACGGAGTCTATAAACCAAGCTTTGCAACAAGTTGG
ATTAGTTTATAAGGGGACTAGCCAAGTTACCCATTTTTTATGGGTGCTGATTAATGATTATGGGTTAGAAAGGTTAAAGA
AAAAAGTTAAAAAACCGCTTAAAGGATTGAAAGTTGCGGGATATTACGGGTGTCATATTTTACGTCCTCCTCACATTATG
AATTTTGAAGATTATGCAAATCCTCATTCCCTTGAAGATTTGATCAGAACCTTGGGAGCTGAACCCGTTGATTTTGATGC
TCGTTTGAAATGTTGCGGTTTTCATGCGCTTTTAACTAGTAATGCTGATGCAATTAAAGCTACAGGGAAAATCAATCTTA
GTGCGATTAATGCTGGTGCAGACTGCACTGTTACTCCGTGTCCTCTCTGTCAGATGCAGCTTGATATGTATCAACCAGAA
GGGAAACGAGCAGTTGGTGCTAAAAAAGAGATTCCATCTTTGCATTTTACTCAACTAATAGGATTAGCCCTTGGCTTTAA
TGCAGAGGAGCTTGGGCTAAATCGACATATTGTAAATACTTCAGTTGTATATGCTGCTCGCTGA

Upstream 100 bases:

>100_bases
CAAAGCAGATGTTTGCAAAATCAATTAAAGAGATATAAGCAGGCTTGTAAAATATTAAAATAACAACGAGAAAACCTAAA
AAAGGGGAGTAAGTACAATT

Downstream 100 bases:

>100_bases
AACTAATATAGACGCTTATTGACACATTAAACCGCAGAATTTAAATACGTTCTGCGGTTTTTATCCAATTAGCTCATGAT
TGAAATCTTGGTGAAAAAGA

Product: putative succinate/fumarate oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKYAFFPGCVLQGASEEAYIATIKVANALGIELVEIPGWTCCGGSHLQDYDGTVALAVNARNIALAEKMNLPILTVCSTC
TLMLREAKHKLDNGKTESINQALQQVGLVYKGTSQVTHFLWVLINDYGLERLKKKVKKPLKGLKVAGYYGCHILRPPHIM
NFEDYANPHSLEDLIRTLGAEPVDFDARLKCCGFHALLTSNADAIKATGKINLSAINAGADCTVTPCPLCQMQLDMYQPE
GKRAVGAKKEIPSLHFTQLIGLALGFNAEELGLNRHIVNTSVVYAAR

Sequences:

>Translated_287_residues
MKYAFFPGCVLQGASEEAYIATIKVANALGIELVEIPGWTCCGGSHLQDYDGTVALAVNARNIALAEKMNLPILTVCSTC
TLMLREAKHKLDNGKTESINQALQQVGLVYKGTSQVTHFLWVLINDYGLERLKKKVKKPLKGLKVAGYYGCHILRPPHIM
NFEDYANPHSLEDLIRTLGAEPVDFDARLKCCGFHALLTSNADAIKATGKINLSAINAGADCTVTPCPLCQMQLDMYQPE
GKRAVGAKKEIPSLHFTQLIGLALGFNAEELGLNRHIVNTSVVYAAR
>Mature_287_residues
MKYAFFPGCVLQGASEEAYIATIKVANALGIELVEIPGWTCCGGSHLQDYDGTVALAVNARNIALAEKMNLPILTVCSTC
TLMLREAKHKLDNGKTESINQALQQVGLVYKGTSQVTHFLWVLINDYGLERLKKKVKKPLKGLKVAGYYGCHILRPPHIM
NFEDYANPHSLEDLIRTLGAEPVDFDARLKCCGFHALLTSNADAIKATGKINLSAINAGADCTVTPCPLCQMQLDMYQPE
GKRAVGAKKEIPSLHFTQLIGLALGFNAEELGLNRHIVNTSVVYAAR

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31288; Mature: 31288

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAFFPGCVLQGASEEAYIATIKVANALGIELVEIPGWTCCGGSHLQDYDGTVALAVNA
CCEEECCHHHCCCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEEC
RNIALAEKMNLPILTVCSTCTLMLREAKHKLDNGKTESINQALQQVGLVYKGTSQVTHFL
CEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEECHHHHHHHH
WVLINDYGLERLKKKVKKPLKGLKVAGYYGCHILRPPHIMNFEDYANPHSLEDLIRTLGA
HHHHHHHCHHHHHHHHHHHHHHCEEEEEECEEEECCCCCCCCHHCCCCCHHHHHHHHHCC
EPVDFDARLKCCGFHALLTSNADAIKATGKINLSAINAGADCTVTPCPLCQMQLDMYQPE
CCCCCCCEEEHEEEEHHHHCCCCCEEECCEEEEEEECCCCCCEECCCCHHHHHHHHCCCC
GKRAVGAKKEIPSLHFTQLIGLALGFNAEELGLNRHIVNTSVVYAAR
CCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MKYAFFPGCVLQGASEEAYIATIKVANALGIELVEIPGWTCCGGSHLQDYDGTVALAVNA
CCEEECCHHHCCCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEEEEEC
RNIALAEKMNLPILTVCSTCTLMLREAKHKLDNGKTESINQALQQVGLVYKGTSQVTHFL
CEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEECHHHHHHHH
WVLINDYGLERLKKKVKKPLKGLKVAGYYGCHILRPPHIMNFEDYANPHSLEDLIRTLGA
HHHHHHHCHHHHHHHHHHHHHHCEEEEEECEEEECCCCCCCCHHCCCCCHHHHHHHHHCC
EPVDFDARLKCCGFHALLTSNADAIKATGKINLSAINAGADCTVTPCPLCQMQLDMYQPE
CCCCCCCEEEHEEEEHHHHCCCCCEEECCEEEEEEECCCCCCEECCCCHHHHHHHHCCCC
GKRAVGAKKEIPSLHFTQLIGLALGFNAEELGLNRHIVNTSVVYAAR
CCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]