Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78043041

Identifier: 78043041

GI number: 78043041

Start: 56176

End: 57432

Strand: Direct

Name: 78043041

Synonym: CHY_0066

Alternate gene names: NA

Gene position: 56176-57432 (Clockwise)

Preceding gene: 78043435

Following gene: 78044497

Centisome position: 2.34

GC content: 39.94

Gene sequence:

>1257_bases
ATGATAATTGAATTAGGATTTGGTAAAGAAAAAAAACAGCTTTCAGTTAAGTCGGAAAATTTGTTAGGGGTTTTGGTACC
CAATCAGGTTGAAGTTGAGCTAACCGGGAAAGAGGAAGTAATCAGAGCATTAAACAACCCTATTGATTCTCCAAAATTAA
GAGAAATTGCCAAACCGGGAGAAAAAATTGCTATAATAACCAGTGATATTACCAGGCCTGTACCCAATAAAATTTTGTTG
CCTCTGGTGCTTGAGGAATTATGGCAAGCGGGAGTAAAAGATGAAGATATTACAATAGTATTTGCCCTTGGGAGTCACCG
TTTTCATACCGAAGAGGAAAAGATAAGTTTGGTTGGCGAAGAAATATACCATAGGATTAAGTGTATAGATAGCGATCAAA
GAGATTGTGTGCGTTTAGGCTATACAAAGTTCGGAACTCCTGTAGATGTCTTTCGACCGGTTGCAGAAGCCGATCGACGG
ATATGCCTGGGAAATATAGAATATCATTATTTTGCCGGTTATAGTGGTGGAGCTAAGGCAATCATGCCCGGTGTCTCAAG
TCGGGAAGCGATCCAGGCTAATCACAGCCGTATGGTGGAAGTAGAAGCTCATGCAGGCAATATTGCCACCAACCCAGTGC
GCCAGGATATTGACGAAGTAGCTAAGTTTGTTTCCTGTGACTTTATTCTCAATGTAATCCTTAACGAACAAAAACAAATT
ATTAAAGCGGTAGCTGGCCATTATCTTTCTGCCCACCGAAAAGGATGTGAATTTTTAGATCAATTATATAAAGTAAAAAT
CAAGGAAAAAGCAGATATCGTTATTGTTTCTGCCGGAGGCTTTCCTAAAGATATCAATTTATACCAAGCGCAAAAGGCTC
TGGATAATGCCAAGCATGCTGTTAAAAAAGGTGGAATAATAATATTGGTAGCAGCCTGTTCCGAGGGATTTGGTGAAAAG
GTTTTTGAAGATTGGATGTTATCGGTATCTAGGCCGGAAGATTTAATTAACCGTATCAAGGAAAGATTTCAGTTAGGGGG
TCATAAAGCTGCTGCAATTGCTATGGTATTACGGGAGGCTGAGATCTTTCTAGTATCGGAATTAAATCCTGATATTGTTC
GCCAAATTTTTCTTACCCCTTTTACCAGTTTGGAGCAAGCCTTAGCCAGAGCATTTGAGAAAAAAGGGCCTTCAGCTAAA
GTGTATGTAATTCCCTATGGGGGAGCGACTTTGCCCTATTTTGATGCAGAATGTTGA

Upstream 100 bases:

>100_bases
TTGACACATTAAACCGCAGAATTTAAATACGTTCTGCGGTTTTTATCCAATTAGCTCATGATTGAAATCTTGGTGAAAAA
GAGAAAGGGGCAATAATAAA

Downstream 100 bases:

>100_bases
TTAGGTGGTATAAAACGTATATACTTATGTTGCGTAGCCAACGTTCCTGTTTTTTCACTTTTTGAGAAGCGAAGAGGAAC
TCTTGTTATATCTTCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MIIELGFGKEKKQLSVKSENLLGVLVPNQVEVELTGKEEVIRALNNPIDSPKLREIAKPGEKIAIITSDITRPVPNKILL
PLVLEELWQAGVKDEDITIVFALGSHRFHTEEEKISLVGEEIYHRIKCIDSDQRDCVRLGYTKFGTPVDVFRPVAEADRR
ICLGNIEYHYFAGYSGGAKAIMPGVSSREAIQANHSRMVEVEAHAGNIATNPVRQDIDEVAKFVSCDFILNVILNEQKQI
IKAVAGHYLSAHRKGCEFLDQLYKVKIKEKADIVIVSAGGFPKDINLYQAQKALDNAKHAVKKGGIIILVAACSEGFGEK
VFEDWMLSVSRPEDLINRIKERFQLGGHKAAAIAMVLREAEIFLVSELNPDIVRQIFLTPFTSLEQALARAFEKKGPSAK
VYVIPYGGATLPYFDAEC

Sequences:

>Translated_418_residues
MIIELGFGKEKKQLSVKSENLLGVLVPNQVEVELTGKEEVIRALNNPIDSPKLREIAKPGEKIAIITSDITRPVPNKILL
PLVLEELWQAGVKDEDITIVFALGSHRFHTEEEKISLVGEEIYHRIKCIDSDQRDCVRLGYTKFGTPVDVFRPVAEADRR
ICLGNIEYHYFAGYSGGAKAIMPGVSSREAIQANHSRMVEVEAHAGNIATNPVRQDIDEVAKFVSCDFILNVILNEQKQI
IKAVAGHYLSAHRKGCEFLDQLYKVKIKEKADIVIVSAGGFPKDINLYQAQKALDNAKHAVKKGGIIILVAACSEGFGEK
VFEDWMLSVSRPEDLINRIKERFQLGGHKAAAIAMVLREAEIFLVSELNPDIVRQIFLTPFTSLEQALARAFEKKGPSAK
VYVIPYGGATLPYFDAEC
>Mature_418_residues
MIIELGFGKEKKQLSVKSENLLGVLVPNQVEVELTGKEEVIRALNNPIDSPKLREIAKPGEKIAIITSDITRPVPNKILL
PLVLEELWQAGVKDEDITIVFALGSHRFHTEEEKISLVGEEIYHRIKCIDSDQRDCVRLGYTKFGTPVDVFRPVAEADRR
ICLGNIEYHYFAGYSGGAKAIMPGVSSREAIQANHSRMVEVEAHAGNIATNPVRQDIDEVAKFVSCDFILNVILNEQKQI
IKAVAGHYLSAHRKGCEFLDQLYKVKIKEKADIVIVSAGGFPKDINLYQAQKALDNAKHAVKKGGIIILVAACSEGFGEK
VFEDWMLSVSRPEDLINRIKERFQLGGHKAAAIAMVLREAEIFLVSELNPDIVRQIFLTPFTSLEQALARAFEKKGPSAK
VYVIPYGGATLPYFDAEC

Specific function: Unknown

COG id: COG3875

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46436; Mature: 46436

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIELGFGKEKKQLSVKSENLLGVLVPNQVEVELTGKEEVIRALNNPIDSPKLREIAKPG
CEEEECCCCCHHHEEECCCCEEEEECCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHCCC
EKIAIITSDITRPVPNKILLPLVLEELWQAGVKDEDITIVFALGSHRFHTEEEKISLVGE
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
EIYHRIKCIDSDQRDCVRLGYTKFGTPVDVFRPVAEADRRICLGNIEYHYFAGYSGGAKA
HHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCCEEEEECCEEEEEECCCCCCHH
IMPGVSSREAIQANHSRMVEVEAHAGNIATNPVRQDIDEVAKFVSCDFILNVILNEQKQI
CCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAVAGHYLSAHRKGCEFLDQLYKVKIKEKADIVIVSAGGFPKDINLYQAQKALDNAKHA
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
VKKGGIIILVAACSEGFGEKVFEDWMLSVSRPEDLINRIKERFQLGGHKAAAIAMVLREA
HHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
EIFLVSELNPDIVRQIFLTPFTSLEQALARAFEKKGPSAKVYVIPYGGATLPYFDAEC
CEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIIELGFGKEKKQLSVKSENLLGVLVPNQVEVELTGKEEVIRALNNPIDSPKLREIAKPG
CEEEECCCCCHHHEEECCCCEEEEECCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHCCC
EKIAIITSDITRPVPNKILLPLVLEELWQAGVKDEDITIVFALGSHRFHTEEEKISLVGE
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
EIYHRIKCIDSDQRDCVRLGYTKFGTPVDVFRPVAEADRRICLGNIEYHYFAGYSGGAKA
HHHHHHHHCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCCEEEEECCEEEEEECCCCCCHH
IMPGVSSREAIQANHSRMVEVEAHAGNIATNPVRQDIDEVAKFVSCDFILNVILNEQKQI
CCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAVAGHYLSAHRKGCEFLDQLYKVKIKEKADIVIVSAGGFPKDINLYQAQKALDNAKHA
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
VKKGGIIILVAACSEGFGEKVFEDWMLSVSRPEDLINRIKERFQLGGHKAAAIAMVLREA
HHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
EIFLVSELNPDIVRQIFLTPFTSLEQALARAFEKKGPSAKVYVIPYGGATLPYFDAEC
CEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA