| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yeiH [C]
Identifier: 78043356
GI number: 78043356
Start: 9471
End: 10502
Strand: Direct
Name: yeiH [C]
Synonym: CHY_0012
Alternate gene names: 78043356
Gene position: 9471-10502 (Clockwise)
Preceding gene: 78044965
Following gene: 78044734
Centisome position: 0.39
GC content: 47.97
Gene sequence:
>1032_bases ATGTCGCAGGAAGCCATAGTATTGATAAATAAAAAAAATAAATCTTTTAATATGGTACGGGGCTTAACATTAACCCTAAC TTTAACCCTACTGGCCCGGCAGTTAAGCAGCCTTCCCCTTTTTTCCGTTATGGGAACCATGGTAATCGCCATCCTTTTAG GCATTTCCTGGCGTGCGGTGCTGGGGGTGCCTCGAATAGCCAACGAAGGTATCGATTTTGCGGCCAAAAAGTTGTTAAGA CTTGGTGTGATTCTAATGGGCATCCGCCTGGATTTCAATATGATAATTGCCTCCGGACCTCGAATTATTTTAATTGATGC CTTGGTCATAGTTTTTACAATTACCCTGTTCTGGTGGCTTGGTAAGCGTTTTTCCCTGAACAAACGCTTGACCGCTCTTC TCGGGGTAGGCACCGCTGTATGCGGGGCAGCGGCCATTGCTGCGGTAGCGCCCCTGGTGCATGCCGATGATAATGAGACA GCTATATCGGTAGGTATTGTTGCTTTGCTTGGTACCCTGGGTGCCTTGGTTTATACCCTGCTCCAACCCTTTTTACCCTT AAGCCCCTATGCGTACGGGGTGCTTACCGGTTCTACCTTGCATGAAGTGGCTCATGTGGTAGCGGCTTCTATGGCGGGAG GAAAGGAAAGTTCCGAAATTGCAATCCTGGTAAAATTAGGTCGGGTAGCACTGCTAATTCCCGTGGCCATGGTTATGGGT TATCTTTTTAACAAAAAACACCGAGGGTCTTCGCAGCAACACTCCAGGCAATTACCCATTCCCTGGTTTGTCTTCGGTTT CTTCGGTTTTAGTTTGGTAAATACCTTTAACCTCCTGACACCTGCGATGGAACAGTTTATCCTGCAGGTAAGCATTTTTC TCCTGACGATGGCTATGGCTGGACTTGGCCTGCACGTGAGGCTACAAACTTTCAGGCGGGTAGGGGGTGGCTCGCTGCTG GTGGGTGTGATCGGATCTCTGGCATTAGCCCTGTTTGGCTGGGGATTGCTGATATTATTTTCAATTACTTAA
Upstream 100 bases:
>100_bases AATTCATTGTTACTTGATATTTCTGCTGGCGCCATTAATATGATATTCTAATGGCTGTAAACTCAATTCCCCGGGGAAAA ATTTTAAGAGGGGGTAGCGT
Downstream 100 bases:
>100_bases GCCTTAAAAAATAATGCAAAAAGGAGGTTCCTTTTTGAACCGAAATCAGCTGGAAATTTTCCGGGTGGTGGCGGAAAAGA AAAGTTTTTCTGAAGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSQEAIVLINKKNKSFNMVRGLTLTLTLTLLARQLSSLPLFSVMGTMVIAILLGISWRAVLGVPRIANEGIDFAAKKLLR LGVILMGIRLDFNMIIASGPRIILIDALVIVFTITLFWWLGKRFSLNKRLTALLGVGTAVCGAAAIAAVAPLVHADDNET AISVGIVALLGTLGALVYTLLQPFLPLSPYAYGVLTGSTLHEVAHVVAASMAGGKESSEIAILVKLGRVALLIPVAMVMG YLFNKKHRGSSQQHSRQLPIPWFVFGFFGFSLVNTFNLLTPAMEQFILQVSIFLLTMAMAGLGLHVRLQTFRRVGGGSLL VGVIGSLALALFGWGLLILFSIT
Sequences:
>Translated_343_residues MSQEAIVLINKKNKSFNMVRGLTLTLTLTLLARQLSSLPLFSVMGTMVIAILLGISWRAVLGVPRIANEGIDFAAKKLLR LGVILMGIRLDFNMIIASGPRIILIDALVIVFTITLFWWLGKRFSLNKRLTALLGVGTAVCGAAAIAAVAPLVHADDNET AISVGIVALLGTLGALVYTLLQPFLPLSPYAYGVLTGSTLHEVAHVVAASMAGGKESSEIAILVKLGRVALLIPVAMVMG YLFNKKHRGSSQQHSRQLPIPWFVFGFFGFSLVNTFNLLTPAMEQFILQVSIFLLTMAMAGLGLHVRLQTFRRVGGGSLL VGVIGSLALALFGWGLLILFSIT >Mature_342_residues SQEAIVLINKKNKSFNMVRGLTLTLTLTLLARQLSSLPLFSVMGTMVIAILLGISWRAVLGVPRIANEGIDFAAKKLLRL GVILMGIRLDFNMIIASGPRIILIDALVIVFTITLFWWLGKRFSLNKRLTALLGVGTAVCGAAAIAAVAPLVHADDNETA ISVGIVALLGTLGALVYTLLQPFLPLSPYAYGVLTGSTLHEVAHVVAASMAGGKESSEIAILVKLGRVALLIPVAMVMGY LFNKKHRGSSQQHSRQLPIPWFVFGFFGFSLVNTFNLLTPAMEQFILQVSIFLLTMAMAGLGLHVRLQTFRRVGGGSLLV GVIGSLALALFGWGLLILFSIT
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=340, Percent_Identity=33.5294117647059, Blast_Score=159, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36808; Mature: 36677
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEAIVLINKKNKSFNMVRGLTLTLTLTLLARQLSSLPLFSVMGTMVIAILLGISWRAV CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH LGVPRIANEGIDFAAKKLLRLGVILMGIRLDFNMIIASGPRIILIDALVIVFTITLFWWL HCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHH GKRFSLNKRLTALLGVGTAVCGAAAIAAVAPLVHADDNETAISVGIVALLGTLGALVYTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LQPFLPLSPYAYGVLTGSTLHEVAHVVAASMAGGKESSEIAILVKLGRVALLIPVAMVMG HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH YLFNKKHRGSSQQHSRQLPIPWFVFGFFGFSLVNTFNLLTPAMEQFILQVSIFLLTMAMA HHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLHVRLQTFRRVGGGSLLVGVIGSLALALFGWGLLILFSIT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQEAIVLINKKNKSFNMVRGLTLTLTLTLLARQLSSLPLFSVMGTMVIAILLGISWRAV CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH LGVPRIANEGIDFAAKKLLRLGVILMGIRLDFNMIIASGPRIILIDALVIVFTITLFWWL HCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHH GKRFSLNKRLTALLGVGTAVCGAAAIAAVAPLVHADDNETAISVGIVALLGTLGALVYTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LQPFLPLSPYAYGVLTGSTLHEVAHVVAASMAGGKESSEIAILVKLGRVALLIPVAMVMG HHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH YLFNKKHRGSSQQHSRQLPIPWFVFGFFGFSLVNTFNLLTPAMEQFILQVSIFLLTMAMA HHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLHVRLQTFRRVGGGSLLVGVIGSLALALFGWGLLILFSIT CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA