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The map label for this gene is 78043348

Identifier: 78043348

GI number: 78043348

Start: 1792892

End: 1793563

Strand: Direct

Name: 78043348

Synonym: CHY_2008

Alternate gene names: NA

Gene position: 1792892-1793563 (Clockwise)

Preceding gene: 78044628

Following gene: 78044124

Centisome position: 74.66

GC content: 38.24

Gene sequence:

>672_bases
ATGGAGCAAGCCCAATTCACGCAGGAAGTTTTAAAAGCCCTGAGTAATCTAAACAGTCACCTGCAACGGATTGACCAAAG
TCTCTTTGACCTAAATACTAAAGTAACAAACATCGAGCAAAGACTGGATAGAGTTGAACAAAGACTGGAAAATGTTGAAC
AAAGACTGGAAAATGTTGAACAAAGACTGGATAGAGTCGAACAAAGACTGGACAGCGTAGAAAAGAGATTGGACAAAGTT
GAAGAAAGATTGGACAAAGTTGAACAAAGATTGGATAGAGTTGAACAAAGATTGGATAAAGTTGAAGAAAGATTGGACAA
AGTTGAACTAAGGCTTGACCATTTAGAAGGTGAGGTTATTAGTCTTAAAGTTCGGGTAGAAACTCTGGAAAATCGCTTTG
ATTCACTGGAAAAAAGGACAAGCTCTTTAGAAGAAAACCAAAACATCATTGCTAAAAACGTTTTATATCTTACCGAAAAA
ATGCCGGAGCTTTTCCGTGAAGTTGCAGGGATCGCCGCAAAGCAACAGGAAATTCTTGAAAACCAAAGTAAATTTGCAGA
ATTTGCCAGGACCTACTCTCTGAAAACCGACTTTTTGGCCCACCGCTTACAGGAATTAGAAAAAGAATTTTGGGTACTTA
AAACCGGCTACAAACCCGAGGTAAATTTTTAA

Upstream 100 bases:

>100_bases
TCCCGCATTCTTCCCCTCCTTCCTTTTTTTGTATATAAAATATTAGACAAGTTAGTGTTTTATGCTATAATTTAGTTAAT
AAAACTTGAGGGGGATTTTT

Downstream 100 bases:

>100_bases
GGCGGGATTGCTCCCGCCTTAAATTACATCATCGTAATTTTGTTGATTTAAAGCCTGTTCTCTCCTATTTTCAATAAACT
CACTTACCAGCACCAGGGCC

Product: KID repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEQAQFTQEVLKALSNLNSHLQRIDQSLFDLNTKVTNIEQRLDRVEQRLENVEQRLENVEQRLDRVEQRLDSVEKRLDKV
EERLDKVEQRLDRVEQRLDKVEERLDKVELRLDHLEGEVISLKVRVETLENRFDSLEKRTSSLEENQNIIAKNVLYLTEK
MPELFREVAGIAAKQQEILENQSKFAEFARTYSLKTDFLAHRLQELEKEFWVLKTGYKPEVNF

Sequences:

>Translated_223_residues
MEQAQFTQEVLKALSNLNSHLQRIDQSLFDLNTKVTNIEQRLDRVEQRLENVEQRLENVEQRLDRVEQRLDSVEKRLDKV
EERLDKVEQRLDRVEQRLDKVEERLDKVELRLDHLEGEVISLKVRVETLENRFDSLEKRTSSLEENQNIIAKNVLYLTEK
MPELFREVAGIAAKQQEILENQSKFAEFARTYSLKTDFLAHRLQELEKEFWVLKTGYKPEVNF
>Mature_223_residues
MEQAQFTQEVLKALSNLNSHLQRIDQSLFDLNTKVTNIEQRLDRVEQRLENVEQRLENVEQRLDRVEQRLDSVEKRLDKV
EERLDKVEQRLDRVEQRLDKVEERLDKVELRLDHLEGEVISLKVRVETLENRFDSLEKRTSSLEENQNIIAKNVLYLTEK
MPELFREVAGIAAKQQEILENQSKFAEFARTYSLKTDFLAHRLQELEKEFWVLKTGYKPEVNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0134 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002862 [H]

Pfam domain/function: PF01519 DUF16 [H]

EC number: NA

Molecular weight: Translated: 26668; Mature: 26668

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAQFTQEVLKALSNLNSHLQRIDQSLFDLNTKVTNIEQRLDRVEQRLENVEQRLENVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLDRVEQRLDSVEKRLDKVEERLDKVEQRLDRVEQRLDKVEERLDKVELRLDHLEGEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SLKVRVETLENRFDSLEKRTSSLEENQNIIAKNVLYLTEKMPELFREVAGIAAKQQEILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSKFAEFARTYSLKTDFLAHRLQELEKEFWVLKTGYKPEVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEQAQFTQEVLKALSNLNSHLQRIDQSLFDLNTKVTNIEQRLDRVEQRLENVEQRLENVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLDRVEQRLDSVEKRLDKVEERLDKVEQRLDRVEQRLDKVEERLDKVELRLDHLEGEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SLKVRVETLENRFDSLEKRTSSLEENQNIIAKNVLYLTEKMPELFREVAGIAAKQQEILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSKFAEFARTYSLKTDFLAHRLQELEKEFWVLKTGYKPEVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]