| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is arsB [C]
Identifier: 78044124
GI number: 78044124
Start: 1803333
End: 1804610
Strand: Direct
Name: arsB [C]
Synonym: CHY_2019
Alternate gene names: 78044124
Gene position: 1803333-1804610 (Clockwise)
Preceding gene: 78043348
Following gene: 78042995
Centisome position: 75.09
GC content: 42.96
Gene sequence:
>1278_bases ATGGGTCAATCGCTAATTGCCCTTACCATCTTTTTGGGGACCTATGCCTTAATTATTTCCGAAAAGCTTCACCGGGCCAT TGCCGCACTTTTAGGCGGTACTTTATTAATTATTCTTGGAATTGTCTCTCAAGAAAAAGCAATCCACCACATCGACTGGA ATACCCTGGGTCTCTTAATTGGCATGATGATTATTGTCGGCATTACCAAAAAAACAGGAGTCTTTCAGTACCTGGCGGTA AAAGCGGTTAAATGGGCCAAAGGGGAGCCAGTTTATATTTTAATAGCTCTGGCTACCGTTACCGCCTTTTTATCGGCATT TTTAGATAACGTTACAACAGTTTTACTGATTGTTCCGGTAACCTTCAATATAACTGACCGGCTGGGGATAAATCCTATTC CCTTTCTTATTTCCCAGGTGTTAGCCAGTAACATCGGCGGTACCGCCACTTTAATCGGTGACCCGCCCAACATTATGATT GGCAGCCAAACTCACTTGGACTTTTTAGATTTTCTTAAGAATTTAACTCCAGTCGTAGCAATAATCCATATTGCAACTAT GTTTCTTTTTTATTTAATTTATCGTAAAGATTTTAATGTGTCAGCAGAATTAAAAAAGAAGTTACTTGATTTAAATGAAA TTGACGAAATTAAAGATTTTGCCCTCTTAAAGAAAAGCCTTTTTGTCTTAGGCCTCGTCATTCTTGGCTTTATTTTGCAC GGTACACTTGGTTTAGAATCGGCCACCATCGCCTTATTTGGTGCAGCGCTTTTATTAACCATCACCCGGGACGAGCCGGA GGAAGTGCTTTTAACCGTGGAATGGCCTTCCATCTTTTTTTTCCTGGGTTTATTTATCGTGGTAGGAGGCCTTGTGGAAA CGGGAGTTATCGACCGGGTAGCCCGCTGGAGCCTGGAAGCCACCAAAGGTAATTTCACTTTAACCGGGATGTTAATTCTC TGGCTTTCGGCCATAGCTTCGGCATTTGTCGATAACATCCCCTTTGTGGCCACGATGATTCCGTTAATTCAGAAGATGGG TGCTTTAGCCGGCATGACACCACAGGCTTTGGAGCCGCTGTGGTGGGCCTTATCTTTAGGCGCCTGCCTGGGCGGCAACG GTACGATAATTGGCGCTTCAGCTAACGTGATTGTGGCGGGTTTAGCTGAGAAAAACGGCTATCCGATTTCGTTTATGGGT TTTATGAAAATAGCCTTTCCTTTAATGCTGGTTTCGATAGTGATTTCCATGGGCTATCTTCTCCTGTTTTATTTTTAA
Upstream 100 bases:
>100_bases GTTTTTAAATTATCAAACATTTACAAAGGGTTTATTATGTTTTAAGATGAATTTATGGTGACAATTACGGCTTGTGATTC ACTAAAAGGGGGAGAAGGAA
Downstream 100 bases:
>100_bases AACCATTTAAGCCGCGCTTTTGCGCGGCTTTTGTATTAAATTTGATACTTTTCTTTAATAAATGGTAAGATAAAAAATAA AAAGCCCGGAGGTGTCTAAT
Product: arsenic transporter family protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MGQSLIALTIFLGTYALIISEKLHRAIAALLGGTLLIILGIVSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAV KAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFNITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMI GSQTHLDFLDFLKNLTPVVAIIHIATMFLFYLIYRKDFNVSAELKKKLLDLNEIDEIKDFALLKKSLFVLGLVILGFILH GTLGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLIL WLSAIASAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFMG FMKIAFPLMLVSIVISMGYLLLFYF
Sequences:
>Translated_425_residues MGQSLIALTIFLGTYALIISEKLHRAIAALLGGTLLIILGIVSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAV KAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFNITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMI GSQTHLDFLDFLKNLTPVVAIIHIATMFLFYLIYRKDFNVSAELKKKLLDLNEIDEIKDFALLKKSLFVLGLVILGFILH GTLGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLIL WLSAIASAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFMG FMKIAFPLMLVSIVISMGYLLLFYF >Mature_424_residues GQSLIALTIFLGTYALIISEKLHRAIAALLGGTLLIILGIVSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAVK AVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFNITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIG SQTHLDFLDFLKNLTPVVAIIHIATMFLFYLIYRKDFNVSAELKKKLLDLNEIDEIKDFALLKKSLFVLGLVILGFILHG TLGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLILW LSAIASAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFMGF MKIAFPLMLVSIVISMGYLLLFYF
Specific function: Involved In Arsenical Resistance. Thought To Form The Channel Of An Arsenite Pump (By Similarity). [C]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=504, Percent_Identity=36.1111111111111, Blast_Score=237, Evalue=2e-62, Organism=Escherichia coli, GI87082277, Length=305, Percent_Identity=25.9016393442623, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1787039, Length=374, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581759, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574683, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574681, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574685, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574678, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI19920704, Length=501, Percent_Identity=35.3293413173653, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI45550608, Length=487, Percent_Identity=35.1129363449692, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI221472711, Length=499, Percent_Identity=28.2565130260521, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24581764, Length=499, Percent_Identity=28.2565130260521, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI85724998, Length=484, Percent_Identity=30.1652892561983, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI62484377, Length=484, Percent_Identity=30.1652892561983, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24656008, Length=478, Percent_Identity=28.0334728033473, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 46012; Mature: 45881
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQSLIALTIFLGTYALIISEKLHRAIAALLGGTLLIILGIVSQEKAIHHIDWNTLGLLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHH GMMIIVGITKKTGVFQYLAVKAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPV HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEHEEEE TFNITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIGSQTHLDFLDFLKNLTPVVA EEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHH IIHIATMFLFYLIYRKDFNVSAELKKKLLDLNEIDEIKDFALLKKSLFVLGLVILGFILH HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTLGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRV HHCCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ARWSLEATKGNFTLTGMLILWLSAIASAFVDNIPFVATMIPLIQKMGALAGMTPQALEPL HHHHHEECCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH WWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFMGFMKIAFPLMLVSIVISMGYL HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLFYF HHHCC >Mature Secondary Structure GQSLIALTIFLGTYALIISEKLHRAIAALLGGTLLIILGIVSQEKAIHHIDWNTLGLLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHH GMMIIVGITKKTGVFQYLAVKAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPV HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEHEEEE TFNITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIGSQTHLDFLDFLKNLTPVVA EEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHH IIHIATMFLFYLIYRKDFNVSAELKKKLLDLNEIDEIKDFALLKKSLFVLGLVILGFILH HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTLGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRV HHCCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ARWSLEATKGNFTLTGMLILWLSAIASAFVDNIPFVATMIPLIQKMGALAGMTPQALEPL HHHHHEECCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH WWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFMGFMKIAFPLMLVSIVISMGYL HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLFYF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]