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The map label for this gene is yidA [H]

Identifier: 78043283

GI number: 78043283

Start: 234778

End: 235578

Strand: Direct

Name: yidA [H]

Synonym: CHY_0268

Alternate gene names: 78043283

Gene position: 234778-235578 (Clockwise)

Preceding gene: 78044731

Following gene: 78042702

Centisome position: 9.78

GC content: 43.07

Gene sequence:

>801_bases
TTGCGGTACCGATTATTAGCTGTGGACCTGGATGATACTTTTTTAAACAAGGAATTGCAGGTTTCGCCACGGGTACAACA
AGCGGTGATAGAGGCTTTAAAGAAAGGGATTATCGTGACCCTGGCTACCGGACGAATGTACCGTTCGGCCAAAAAATATG
CTTTTTCTTTTTTAGGAGACATTCCTCTGATTACCTATAACGGGGCATTGATTAAATATTCCCGTTCGGAACGGGAAGTA
TACCACCAGCCGGTGCCCGGGGAGCTGGCTCTTACTATTTACCGCAGGGTAAAAGGACATTTTCACCTTAATGTTTACCA
GGACGATGAACTTTTGGTCGAGGAAGACAATCAATATATCAGAGATTACAGCAAGATTGCGGGCGTTCCTTTTCGGGTAG
TAAGCAATATAGAAGAACTTTTAGGGAAAAAAGCTCCTACTAAACTTTTAGCTATTGGGGATCCAGAAGAATTAGACCAG
CTCTGGGAAGAAACTAACGGTGAGTTTCGGGGAGTTCTTCACATTACCAAATCGAAACCCCATTATTTAGAGTTTTTAGC
TGCCGGCGTTAATAAAGGAGAGGCTCTAAAAATCTTAGCTCAACATTTAGGGATTTCATTAACGGAAACGGTAGCGGTTG
GAGATAGCTATAACGACCTGGAAATGTTAGAGGCGGCCGGTTTGGGAGTTGCCATGGGCAACGCTCTACCGGAGGTTAAA
CGCCGGGCTGACTTGGTGGTACCGGCTAATGATGAGGATGGAATTGCTTATTTAATAAATGAAATTATTTTAAAAAATTA
A

Upstream 100 bases:

>100_bases
AACCTTAGAGAAGCAACGGTTGAAGAGATTACAGCGGTTCCCGGAATTACCCGGGAAATAGCAGAAAGATTAAAAGAGCT
TTTGGAAATGGAGTGATTTT

Downstream 100 bases:

>100_bases
AAGAAGGGAGAGGTTTTTATGGACTTAAAAGAAATTAGGGCAACAGCCAGAGAAAAACTCAAAGGATTTTGCCGGGTTTG
CCCGGTGTGTGACGGTCGGG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRYRLLAVDLDDTFLNKELQVSPRVQQAVIEALKKGIIVTLATGRMYRSAKKYAFSFLGDIPLITYNGALIKYSRSEREV
YHQPVPGELALTIYRRVKGHFHLNVYQDDELLVEEDNQYIRDYSKIAGVPFRVVSNIEELLGKKAPTKLLAIGDPEELDQ
LWEETNGEFRGVLHITKSKPHYLEFLAAGVNKGEALKILAQHLGISLTETVAVGDSYNDLEMLEAAGLGVAMGNALPEVK
RRADLVVPANDEDGIAYLINEIILKN

Sequences:

>Translated_266_residues
MRYRLLAVDLDDTFLNKELQVSPRVQQAVIEALKKGIIVTLATGRMYRSAKKYAFSFLGDIPLITYNGALIKYSRSEREV
YHQPVPGELALTIYRRVKGHFHLNVYQDDELLVEEDNQYIRDYSKIAGVPFRVVSNIEELLGKKAPTKLLAIGDPEELDQ
LWEETNGEFRGVLHITKSKPHYLEFLAAGVNKGEALKILAQHLGISLTETVAVGDSYNDLEMLEAAGLGVAMGNALPEVK
RRADLVVPANDEDGIAYLINEIILKN
>Mature_266_residues
MRYRLLAVDLDDTFLNKELQVSPRVQQAVIEALKKGIIVTLATGRMYRSAKKYAFSFLGDIPLITYNGALIKYSRSEREV
YHQPVPGELALTIYRRVKGHFHLNVYQDDELLVEEDNQYIRDYSKIAGVPFRVVSNIEELLGKKAPTKLLAIGDPEELDQ
LWEETNGEFRGVLHITKSKPHYLEFLAAGVNKGEALKILAQHLGISLTETVAVGDSYNDLEMLEAAGLGVAMGNALPEVK
RRADLVVPANDEDGIAYLINEIILKN

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=274, Percent_Identity=34.3065693430657, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI87081741, Length=239, Percent_Identity=29.2887029288703, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786982, Length=277, Percent_Identity=27.0758122743682, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48994981, Length=271, Percent_Identity=27.3062730627306, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787043, Length=275, Percent_Identity=24.7272727272727, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29811; Mature: 29811

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRLLAVDLDDTFLNKELQVSPRVQQAVIEALKKGIIVTLATGRMYRSAKKYAFSFLGD
CCEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCC
IPLITYNGALIKYSRSEREVYHQPVPGELALTIYRRVKGHFHLNVYQDDELLVEEDNQYI
CCEEEECCEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCEEEECCHHHH
RDYSKIAGVPFRVVSNIEELLGKKAPTKLLAIGDPEELDQLWEETNGEFRGVLHITKSKP
HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCC
HYLEFLAAGVNKGEALKILAQHLGISLTETVAVGDSYNDLEMLEAAGLGVAMGNALPEVK
HHHHHHHHCCCCCHHHHHHHHHHCCEEEHEEEECCCCCHHHHHHHCCCCCHHCCCCHHHH
RRADLVVPANDEDGIAYLINEIILKN
HHCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRYRLLAVDLDDTFLNKELQVSPRVQQAVIEALKKGIIVTLATGRMYRSAKKYAFSFLGD
CCEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCC
IPLITYNGALIKYSRSEREVYHQPVPGELALTIYRRVKGHFHLNVYQDDELLVEEDNQYI
CCEEEECCEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCEEEECCHHHH
RDYSKIAGVPFRVVSNIEELLGKKAPTKLLAIGDPEELDQLWEETNGEFRGVLHITKSKP
HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCC
HYLEFLAAGVNKGEALKILAQHLGISLTETVAVGDSYNDLEMLEAAGLGVAMGNALPEVK
HHHHHHHHCCCCCHHHHHHHHHHCCEEEHEEEECCCCCHHHHHHHCCCCCHHCCCCHHHH
RRADLVVPANDEDGIAYLINEIILKN
HHCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]