| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043254
Identifier: 78043254
GI number: 78043254
Start: 391919
End: 392905
Strand: Direct
Name: 78043254
Synonym: CHY_0445
Alternate gene names: NA
Gene position: 391919-392905 (Clockwise)
Preceding gene: 78044221
Following gene: 78045146
Centisome position: 16.32
GC content: 42.05
Gene sequence:
>987_bases ATGGATACTGGGCAAAGGGCGAAACCTGTTTTAAAGATTATTTCGGCAATTTTGTTAGGGTTAATGGCCTGGGTTGTACC GTATCTGCCAATTAAACTTCTGCTGGTGCTTTTAGCAATCCTTTTAATTGGCCTTGGGCTTCCAAGAAGCAGGATATCTT TTATAATTTTAAGCTCAATTGTAGTAGTTTTTAGCTTTTTTACAAATCCGAATTTTATTGGGCAAGCGGCCAACTGGCCT GCATGGCTTAGCGATTTTGGTAGCTGGAAAAGTTATACAAATAGCTTTGATAGTGCCCAGATGAAAAACTTTGACATTGA AAAGTATTTTTCCAAGACCCGGGTTAACCCTGACAAGAGAGTGCGCTTGACGGCCAAGACCGTAGAGATTGATACTGACT GCGGTGTGGAAATTTCACTGGTGGAGGGAGATTACATCGAATACCCGGCAGAGCTTCGGTTAAGCCAGAAAGGTGATATA GCTGTAATTTCTGGCGGGCAAAGAGGGGATGTAACCTATGTAATCCGTTTGGGAAAAGATAATTTGAAAAACTTAAAAAT CTCTGCCGCCGGGGTAAAGTTAAAAGGGGAAGGGAACTTTGAAGAGGTTTTTATTGACTGCGCCGGGGCGTATCTTTCTT CGGACCTTAACGTAAAGAACTTAAACATCAATGCGGCGGGGCTTATGCTGAATGGTAATTTCGCAGGGGATAACCTTGAG GTTGATGGGATGGGAATGGAACTAAGGGGAACGTATCGGTTTAACAATATGAAAATAGATGGCATGGGGGCGGAGGTAAA CATGAAGGTAGCTTTGAAAGAGCTCACGGTGGATTCCTTAGCCATTAACGGCCGGATTGAGATAACTGCAAAACCAAACG ATGAAGCTAAAATTAAACTTAATTCCCTGGCGGGGAATATTACTTTAAAAAATTTAGACGGAGTGGTTCTTGAGCATTCT GGTTTTACAAAAATTAACAGAGAGTGA
Upstream 100 bases:
>100_bases TAACAAATATCTGTGATGCCATAATTACCCTCTTGACAGCTTGCTTTCATACTGTTATATAATTATATAACAGCATGAAA CAATGACGGAGGTTTTGAAA
Downstream 100 bases:
>100_bases TGGTGAAGATGTTAAGAAAGGTTGATAAACACAGCGGTATCCCGGCATATATCCAAATTGGCAATATGATCAAAGCAGAG ATAATTCTGGGCAATCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRSRISFIILSSIVVVFSFFTNPNFIGQAANWP AWLSDFGSWKSYTNSFDSAQMKNFDIEKYFSKTRVNPDKRVRLTAKTVEIDTDCGVEISLVEGDYIEYPAELRLSQKGDI AVISGGQRGDVTYVIRLGKDNLKNLKISAAGVKLKGEGNFEEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLE VDGMGMELRGTYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKLNSLAGNITLKNLDGVVLEHS GFTKINRE
Sequences:
>Translated_328_residues MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRSRISFIILSSIVVVFSFFTNPNFIGQAANWP AWLSDFGSWKSYTNSFDSAQMKNFDIEKYFSKTRVNPDKRVRLTAKTVEIDTDCGVEISLVEGDYIEYPAELRLSQKGDI AVISGGQRGDVTYVIRLGKDNLKNLKISAAGVKLKGEGNFEEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLE VDGMGMELRGTYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKLNSLAGNITLKNLDGVVLEHS GFTKINRE >Mature_328_residues MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRSRISFIILSSIVVVFSFFTNPNFIGQAANWP AWLSDFGSWKSYTNSFDSAQMKNFDIEKYFSKTRVNPDKRVRLTAKTVEIDTDCGVEISLVEGDYIEYPAELRLSQKGDI AVISGGQRGDVTYVIRLGKDNLKNLKISAAGVKLKGEGNFEEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLE VDGMGMELRGTYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKLNSLAGNITLKNLDGVVLEHS GFTKINRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35973; Mature: 35973
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRSRISFIILSSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVVFSFFTNPNFIGQAANWPAWLSDFGSWKSYTNSFDSAQMKNFDIEKYFSKTRVNPDKR HHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCE VRLTAKTVEIDTDCGVEISLVEGDYIEYPAELRLSQKGDIAVISGGQRGDVTYVIRLGKD EEEEEEEEEECCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEECCCCCCEEEEEEECCC NLKNLKISAAGVKLKGEGNFEEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLE CCCEEEEEEEEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCEE VDGMGMELRGTYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKL ECCCCEEEEEEEEECCEEEECCCCEEEEEEEEEEECEEEEEECCEEEEEECCCCCCEEEE NSLAGNITLKNLDGVVLEHSGFTKINRE EEEECEEEEECCCCEEEECCCCEECCCC >Mature Secondary Structure MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRSRISFIILSSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VVVFSFFTNPNFIGQAANWPAWLSDFGSWKSYTNSFDSAQMKNFDIEKYFSKTRVNPDKR HHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCE VRLTAKTVEIDTDCGVEISLVEGDYIEYPAELRLSQKGDIAVISGGQRGDVTYVIRLGKD EEEEEEEEEECCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEECCCCCCEEEEEEECCC NLKNLKISAAGVKLKGEGNFEEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLE CCCEEEEEEEEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCEE VDGMGMELRGTYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKL ECCCCEEEEEEEEECCEEEECCCCEEEEEEEEEEECEEEEEECCEEEEEECCCCCCEEEE NSLAGNITLKNLDGVVLEHSGFTKINRE EEEECEEEEECCCCEEEECCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA