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The map label for this gene is ycfF [C]

Identifier: 78043245

GI number: 78043245

Start: 363973

End: 364314

Strand: Direct

Name: ycfF [C]

Synonym: CHY_0420

Alternate gene names: 78043245

Gene position: 363973-364314 (Clockwise)

Preceding gene: 78044693

Following gene: 78043650

Centisome position: 15.16

GC content: 44.15

Gene sequence:

>342_bases
ATGAGTGACTGTCTCTTCTGCAAGATTGCCCGGAAAGAAATTTCCTCGGCTATTGTTTATGAAGATGAGTTAGTGGTGGC
TTTTCGTGACATCAATCCGGTAGCACCGGTGCATATATTGATTGTTCCTAAGGTACATGTGGAAAATATAGCGGACTTAG
GAGAAGAACACCGGGAGCTTGCTGGACATTTGCTACTAAAAGCCAGGGAAATTGCTGAAAAAGAAGGGATTAGTGAATCT
GGGTATCGTCTGGTCAGCAACTGCAGAAAAGACGGCGGTCAAGAGATTTACCACCTCCATTTCCACTTAATTGGCGGTAG
ACCGTTAGGTAAATTTGCCTAA

Upstream 100 bases:

>100_bases
CTAAAATTTTTCTTGCCAGCAGGAATTTTATAGTGTATTGTAGAATTATCTCCTTTTGTAAGGATTGAATTGTACCTTTC
TCCCGAGGGGAGGTGAAGGT

Downstream 100 bases:

>100_bases
TTAAGGCGGTAAAGGGGGTGGGGAGGAGGGAGGGATAGAAAGTGGCAGAAGTTAGAGTTGGCAAAAATGAAAGTTTAGAT
AGCGCTTTAAGACGTTTTAA

Product: HIT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSDCLFCKIARKEISSAIVYEDELVVAFRDINPVAPVHILIVPKVHVENIADLGEEHRELAGHLLLKAREIAEKEGISES
GYRLVSNCRKDGGQEIYHLHFHLIGGRPLGKFA

Sequences:

>Translated_113_residues
MSDCLFCKIARKEISSAIVYEDELVVAFRDINPVAPVHILIVPKVHVENIADLGEEHRELAGHLLLKAREIAEKEGISES
GYRLVSNCRKDGGQEIYHLHFHLIGGRPLGKFA
>Mature_112_residues
SDCLFCKIARKEISSAIVYEDELVVAFRDINPVAPVHILIVPKVHVENIADLGEEHRELAGHLLLKAREIAEKEGISESG
YRLVSNCRKDGGQEIYHLHFHLIGGRPLGKFA

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=108, Percent_Identity=45.3703703703704, Blast_Score=102, Evalue=5e-23,
Organism=Homo sapiens, GI4885413, Length=108, Percent_Identity=42.5925925925926, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787346, Length=110, Percent_Identity=52.7272727272727, Blast_Score=121, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=41.6666666666667, Blast_Score=101, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6320078, Length=106, Percent_Identity=36.7924528301887, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574010, Length=107, Percent_Identity=41.1214953271028, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24581222, Length=107, Percent_Identity=41.1214953271028, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12642; Mature: 12511

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCLFCKIARKEISSAIVYEDELVVAFRDINPVAPVHILIVPKVHVENIADLGEEHREL
CCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
AGHLLLKAREIAEKEGISESGYRLVSNCRKDGGQEIYHLHFHLIGGRPLGKFA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SDCLFCKIARKEISSAIVYEDELVVAFRDINPVAPVHILIVPKVHVENIADLGEEHREL
CCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
AGHLLLKAREIAEKEGISESGYRLVSNCRKDGGQEIYHLHFHLIGGRPLGKFA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]