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The map label for this gene is fdhD [H]

Identifier: 78043212

GI number: 78043212

Start: 710772

End: 711551

Strand: Direct

Name: fdhD [H]

Synonym: CHY_0800

Alternate gene names: 78043212

Gene position: 710772-711551 (Clockwise)

Preceding gene: 78045151

Following gene: 78044014

Centisome position: 29.6

GC content: 44.87

Gene sequence:

>780_bases
ATGGAGATAGTAAATAAAAGAAACATTATTCGTTATTTTGACGGACGCCTGGAAGAAAAAGAAGATTTACTGGTGGATGA
AGCGCCTCTTACCATTTATTTTAACGGGGAAGAACTGGTAACCCTGCTCTGTACCCCGGAATACCAGGATGAATTGGCCG
TAGGTTTTTTAGCGGCGGAAGGATTAATCAATCGCCGGGAAAACTTGGAGAAAATTACCGTTGACCGGGAGCAGGGGCTG
GTGTACGTGGAGTATAAGGGAAATGCCCGGCGGGGGGAACTATTTTTAAAACGGTACATTACTACCGGTTGCGGTAAGGG
AACTACTTTTTACAATGCTTTGGACCCGGTGTCTTTAAAACCGTACCGGGGAAACGTGCGGGTTTCTGCAGAAAGACTTT
TTGCTTTAATGAAAGAAATGCAGCGCCGTTCCGAACTGTACCTTACTACCGGTGGGGTGCACAGTGCGGCGTTGTGCGAT
GCTGAAAAAATTTTATTGTTCCGGGAAGATGTAGGTCGCCACAATGCTGCCGATAAAATTATGGGATATGCCTTTTTAAA
CGGCATTAATTTAGAAGATAAAATCTTTCTTACCTCCGGCCGCATTTCTTCGGAGATAATTTTAAAAGTTGCCAAAATGG
GCATCGGGATGATTGTTTCCCGCTCGGCCCCAACGGAACTGGCTCTTAAGCATGCCGAAGAATTAAATTTAACCGTGGTG
GGTTTTGTCCGGGCGGGCCGCTTAAATATTTATACCGGCAGGGAAAGAATTTTATTATAA

Upstream 100 bases:

>100_bases
TTAGAGGTAATAACCAGTGAAGAATTTAAAAAAGAAGTAGAAAGAATAGGCGGATATAAAACTACGTTAACAGGACAAAT
TGTGGGGAAAGGATAGGATT

Downstream 100 bases:

>100_bases
AAAGAGGAAATTTGGGGTCTTTGGTCGAATTATTATTACAAAAAAATAAGCTGCTCCGAGTATTTTCACCTAAAGCTTTA
GGCCATGGTGAAAATACCAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEIVNKRNIIRYFDGRLEEKEDLLVDEAPLTIYFNGEELVTLLCTPEYQDELAVGFLAAEGLINRRENLEKITVDREQGL
VYVEYKGNARRGELFLKRYITTGCGKGTTFYNALDPVSLKPYRGNVRVSAERLFALMKEMQRRSELYLTTGGVHSAALCD
AEKILLFREDVGRHNAADKIMGYAFLNGINLEDKIFLTSGRISSEIILKVAKMGIGMIVSRSAPTELALKHAEELNLTVV
GFVRAGRLNIYTGRERILL

Sequences:

>Translated_259_residues
MEIVNKRNIIRYFDGRLEEKEDLLVDEAPLTIYFNGEELVTLLCTPEYQDELAVGFLAAEGLINRRENLEKITVDREQGL
VYVEYKGNARRGELFLKRYITTGCGKGTTFYNALDPVSLKPYRGNVRVSAERLFALMKEMQRRSELYLTTGGVHSAALCD
AEKILLFREDVGRHNAADKIMGYAFLNGINLEDKIFLTSGRISSEIILKVAKMGIGMIVSRSAPTELALKHAEELNLTVV
GFVRAGRLNIYTGRERILL
>Mature_259_residues
MEIVNKRNIIRYFDGRLEEKEDLLVDEAPLTIYFNGEELVTLLCTPEYQDELAVGFLAAEGLINRRENLEKITVDREQGL
VYVEYKGNARRGELFLKRYITTGCGKGTTFYNALDPVSLKPYRGNVRVSAERLFALMKEMQRRSELYLTTGGVHSAALCD
AEKILLFREDVGRHNAADKIMGYAFLNGINLEDKIFLTSGRISSEIILKVAKMGIGMIVSRSAPTELALKHAEELNLTVV
GFVRAGRLNIYTGRERILL

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=270, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29259; Mature: 29259

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVNKRNIIRYFDGRLEEKEDLLVDEAPLTIYFNGEELVTLLCTPEYQDELAVGFLAAE
CCCCCCCCEEEECCCCCCCCHHCEEECCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHH
GLINRRENLEKITVDREQGLVYVEYKGNARRGELFLKRYITTGCGKGTTFYNALDPVSLK
HHHHHHCCCCEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCEEC
PYRGNVRVSAERLFALMKEMQRRSELYLTTGGVHSAALCDAEKILLFREDVGRHNAADKI
CCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCHHHEEEEHHHCCCCCCHHHH
MGYAFLNGINLEDKIFLTSGRISSEIILKVAKMGIGMIVSRSAPTELALKHAEELNLTVV
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCEEEE
GFVRAGRLNIYTGRERILL
EEEEECEEEEEECCEEECC
>Mature Secondary Structure
MEIVNKRNIIRYFDGRLEEKEDLLVDEAPLTIYFNGEELVTLLCTPEYQDELAVGFLAAE
CCCCCCCCEEEECCCCCCCCHHCEEECCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHH
GLINRRENLEKITVDREQGLVYVEYKGNARRGELFLKRYITTGCGKGTTFYNALDPVSLK
HHHHHHCCCCEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCEEC
PYRGNVRVSAERLFALMKEMQRRSELYLTTGGVHSAALCDAEKILLFREDVGRHNAADKI
CCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCHHHEEEEHHHCCCCCCHHHH
MGYAFLNGINLEDKIFLTSGRISSEIILKVAKMGIGMIVSRSAPTELALKHAEELNLTVV
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCEEEE
GFVRAGRLNIYTGRERILL
EEEEECEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7860592; 9384377 [H]