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The map label for this gene is yqfO [H]

Identifier: 78043187

GI number: 78043187

Start: 401542

End: 402648

Strand: Direct

Name: yqfO [H]

Synonym: CHY_0460

Alternate gene names: 78043187

Gene position: 401542-402648 (Clockwise)

Preceding gene: 78043325

Following gene: 78043174

Centisome position: 16.72

GC content: 42.1

Gene sequence:

>1107_bases
TTGGCCCATCCGCAGGAAATAGCGGCGGTTATAGAAGAAAAATTTCCACGGAAATTGGCAATGGAGTGGGATAATCCCGG
CTGGCAGATTTATTTTGAAAAAGAAGTACATAAGGTCTTACTGGCTTTGGATATCACCGCAGCTACCGTTGATTTTGCAT
TAAACGAAAAGGTTGATTTAATAATTACTCACCATCCCCTCTTTTTTAAACCGCTTAAGTCCCTGACTTTTGAGCGAAAG
GAAACTCTGCCCCTGTTAAAACTTCTGGAAAAGCAAATTTCGGTGTATGCCATTCACACCAATTTAGATGTGGCTTTCGG
GGGAATAAACGATTATTTAGCAGAGCTTTTAGAACTTCAGGAAGTTAAGCCCCTGGGGGAGGAAATTTTTGAGAAACTTT
ATAAACTTTCCGTTTTTGTTCCGGAATCCCACTGGGAGACGGTTAGAGAAGCGATGGGAGCTGCAGGAGCGGGTTTTATC
GGCAATTATTCTCACTGTACTTTTAACACCCGGGGTATTGGGACTTTTTTACCCCTTGAAGGTACAAATCCGTATATCGG
TGCGGTGGGAAAGCTGGAAAGGGTAGAAGAAGTTAAGATCGAAACAATTGTTCCGGAAAGACTTTTAGCAAAAGTGGTAA
AGGCTATGTTAAAAGTCCATCCCTATGAAGAGGTGGCGTACGATATCTATCCCTTGGAGAACAAAAATTATCTGGGAGGA
ATGGGAAGAATCGGGTTAACCGGTAAAAAAAGCTTTAAAGAGTTTTTAGCTTTAGTGGCGGAGAAATTAGGGATAGAAAA
TTTAAGATACGGGGGTGATTTAAATTCGGTTCCGAAAAAAGTGGCGGTGGTAACGGGAGCCGGCGGTAGCTATTGGCCAA
AAGCTAAGTTTGCGGGGGCGGATATTTTTCTAAGCGGGGATATAAAATACCACGAAGCGGTTTCAATGATAGAAGCCGGT
TTAAATTTTATCGATGCCGGGCACTGGGAAACGGAAAGAATATTTACTGAACTTTTGCTTCCCCTTTTAAGAAAAATTGA
AGGCTTAAGTATTGTTGTGGAGATGGGGGAGCCGGTATTTAAATTTTTTAAAAGCAGCAGGGGGTAA

Upstream 100 bases:

>100_bases
GGAAAATCCTGATTAATTTACAAAAGGCGCAAGTGAAAGATTTAGAAAAGGTTAGGGAAATTAGTGAGATTTTAAATTAT
CTTAAGGAGGTGTTAAAAAG

Downstream 100 bases:

>100_bases
TATTTTGCAGTATATTAGGGAATTATATATGTTTATGCTTTTAGAAGAAGAAGAGCGGAAATTAGCAAATGATGAGCGGA
TATTGGTTAATCGGGAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MAHPQEIAAVIEEKFPRKLAMEWDNPGWQIYFEKEVHKVLLALDITAATVDFALNEKVDLIITHHPLFFKPLKSLTFERK
ETLPLLKLLEKQISVYAIHTNLDVAFGGINDYLAELLELQEVKPLGEEIFEKLYKLSVFVPESHWETVREAMGAAGAGFI
GNYSHCTFNTRGIGTFLPLEGTNPYIGAVGKLERVEEVKIETIVPERLLAKVVKAMLKVHPYEEVAYDIYPLENKNYLGG
MGRIGLTGKKSFKEFLALVAEKLGIENLRYGGDLNSVPKKVAVVTGAGGSYWPKAKFAGADIFLSGDIKYHEAVSMIEAG
LNFIDAGHWETERIFTELLLPLLRKIEGLSIVVEMGEPVFKFFKSSRG

Sequences:

>Translated_368_residues
MAHPQEIAAVIEEKFPRKLAMEWDNPGWQIYFEKEVHKVLLALDITAATVDFALNEKVDLIITHHPLFFKPLKSLTFERK
ETLPLLKLLEKQISVYAIHTNLDVAFGGINDYLAELLELQEVKPLGEEIFEKLYKLSVFVPESHWETVREAMGAAGAGFI
GNYSHCTFNTRGIGTFLPLEGTNPYIGAVGKLERVEEVKIETIVPERLLAKVVKAMLKVHPYEEVAYDIYPLENKNYLGG
MGRIGLTGKKSFKEFLALVAEKLGIENLRYGGDLNSVPKKVAVVTGAGGSYWPKAKFAGADIFLSGDIKYHEAVSMIEAG
LNFIDAGHWETERIFTELLLPLLRKIEGLSIVVEMGEPVFKFFKSSRG
>Mature_367_residues
AHPQEIAAVIEEKFPRKLAMEWDNPGWQIYFEKEVHKVLLALDITAATVDFALNEKVDLIITHHPLFFKPLKSLTFERKE
TLPLLKLLEKQISVYAIHTNLDVAFGGINDYLAELLELQEVKPLGEEIFEKLYKLSVFVPESHWETVREAMGAAGAGFIG
NYSHCTFNTRGIGTFLPLEGTNPYIGAVGKLERVEEVKIETIVPERLLAKVVKAMLKVHPYEEVAYDIYPLENKNYLGGM
GRIGLTGKKSFKEFLALVAEKLGIENLRYGGDLNSVPKKVAVVTGAGGSYWPKAKFAGADIFLSGDIKYHEAVSMIEAGL
NFIDAGHWETERIFTELLLPLLRKIEGLSIVVEMGEPVFKFFKSSRG

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921430, Length=130, Percent_Identity=36.1538461538462, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41243; Mature: 41112

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPQEIAAVIEEKFPRKLAMEWDNPGWQIYFEKEVHKVLLALDITAATVDFALNEKVDL
CCCHHHHHHHHHHHCCHHEECEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHEECCCEEE
IITHHPLFFKPLKSLTFERKETLPLLKLLEKQISVYAIHTNLDVAFGGINDYLAELLELQ
EEECCCHHHHHHHHHHHCHHHCCHHHHHHHHCCEEEEEEECCEEEECCHHHHHHHHHHHH
EVKPLGEEIFEKLYKLSVFVPESHWETVREAMGAAGAGFIGNYSHCTFNTRGIGTFLPLE
HCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECC
GTNPYIGAVGKLERVEEVKIETIVPERLLAKVVKAMLKVHPYEEVAYDIYPLENKNYLGG
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCC
MGRIGLTGKKSFKEFLALVAEKLGIENLRYGGDLNSVPKKVAVVTGAGGSYWPKAKFAGA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
DIFLSGDIKYHEAVSMIEAGLNFIDAGHWETERIFTELLLPLLRKIEGLSIVVEMGEPVF
EEEEECCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
KFFKSSRG
HHHHCCCC
>Mature Secondary Structure 
AHPQEIAAVIEEKFPRKLAMEWDNPGWQIYFEKEVHKVLLALDITAATVDFALNEKVDL
CCHHHHHHHHHHHCCHHEECEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHEECCCEEE
IITHHPLFFKPLKSLTFERKETLPLLKLLEKQISVYAIHTNLDVAFGGINDYLAELLELQ
EEECCCHHHHHHHHHHHCHHHCCHHHHHHHHCCEEEEEEECCEEEECCHHHHHHHHHHHH
EVKPLGEEIFEKLYKLSVFVPESHWETVREAMGAAGAGFIGNYSHCTFNTRGIGTFLPLE
HCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECC
GTNPYIGAVGKLERVEEVKIETIVPERLLAKVVKAMLKVHPYEEVAYDIYPLENKNYLGG
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCC
MGRIGLTGKKSFKEFLALVAEKLGIENLRYGGDLNSVPKKVAVVTGAGGSYWPKAKFAGA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
DIFLSGDIKYHEAVSMIEAGLNFIDAGHWETERIFTELLLPLLRKIEGLSIVVEMGEPVF
EEEEECCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
KFFKSSRG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]