Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is yqfN [H]

Identifier: 78043325

GI number: 78043325

Start: 400865

End: 401563

Strand: Direct

Name: yqfN [H]

Synonym: CHY_0459

Alternate gene names: 78043325

Gene position: 400865-401563 (Clockwise)

Preceding gene: 78044024

Following gene: 78043187

Centisome position: 16.69

GC content: 39.77

Gene sequence:

>699_bases
ATGGAGTTAACGGAAAGGTTAAAAGCGTTAGCAAAACACGTAATTACCGGTGAACCTGCGGCTGATATTGGTACGGACCA
TGCAAAATTACCAATTTATTTAGTAATCCACAATATCTGTCCAAAAGTAATTGCTACCGATTTAAATGAAATGCCACTGA
ATCACGCTCAGAGTGAAGTTAGAGAATACGGGCTTTTGGAAAAAATTGAGTTAAGACAGGGAGACGGGTTATCTCCTTTA
AAACCGGGGGAAGTTAAAAGTGTGGTAATTGCGGGTATGGGTGGGAATACTATTGCGCGGATTATCGAAGGTCGACCGGA
AATTGCCCGGGAAGTTCGCCTTATCCTGCAACCGATGACGGATAGTTATGCTTTACGCTTAAAACTGGTGTCAAGAGGTT
ACCGGATTATTGCCGAGGAACTGGTGGAAGAAAAAAGCAGACTTTACGAAGTTATTGTTGCTGAGGCCGGTAAAATGGAG
AATTTAGATAAAGTTGAAATTGGCTTAGGACCGGTTTTGCTTAAGAATAGGGATGAACTTACAAGAAAATATTTAACAGG
GCAAAAAGAAAAATACCGGAAAATCCTGATTAATTTACAAAAGGCGCAAGTGAAAGATTTAGAAAAGGTTAGGGAAATTA
GTGAGATTTTAAATTATCTTAAGGAGGTGTTAAAAAGTTGGCCCATCCGCAGGAAATAG

Upstream 100 bases:

>100_bases
GGTTTGGGGTTTTTTGTTTTTACTACCTTTTTTGGGGAAGATGCTGTATAATTATTGAAAATATAATTAAACATATTTAA
AAAGTTACTCAGGAGGAAAA

Downstream 100 bases:

>100_bases
CGGCGGTTATAGAAGAAAAATTTCCACGGAAATTGGCAATGGAGTGGGATAATCCCGGCTGGCAGATTTATTTTGAAAAA
GAAGTACATAAGGTCTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL
KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME
NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK

Sequences:

>Translated_232_residues
MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL
KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME
NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK
>Mature_232_residues
MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEVREYGLLEKIELRQGDGLSPL
KPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMTDSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKME
NLDKVEIGLGPVLLKNRDELTRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK

Specific function: Unknown

COG id: COG2384

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006901 [H]

Pfam domain/function: PF04816 DUF633 [H]

EC number: NA

Molecular weight: Translated: 26333; Mature: 26333

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEV
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH
REYGLLEKIELRQGDGLSPLKPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMT
HHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCC
DSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKMENLDKVEIGLGPVLLKNRDEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCHHHH
TRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELTERLKALAKHVITGEPAADIGTDHAKLPIYLVIHNICPKVIATDLNEMPLNHAQSEV
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHH
REYGLLEKIELRQGDGLSPLKPGEVKSVVIAGMGGNTIARIIEGRPEIAREVRLILQPMT
HHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCC
DSYALRLKLVSRGYRIIAEELVEEKSRLYEVIVAEAGKMENLDKVEIGLGPVLLKNRDEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCHHHH
TRKYLTGQKEKYRKILINLQKAQVKDLEKVREISEILNYLKEVLKSWPIRRK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]