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The map label for this gene is yqeN [H]

Identifier: 78043172

GI number: 78043172

Start: 347230

End: 348213

Strand: Direct

Name: yqeN [H]

Synonym: CHY_0405

Alternate gene names: 78043172

Gene position: 347230-348213 (Clockwise)

Preceding gene: 78043916

Following gene: 78042791

Centisome position: 14.46

GC content: 38.92

Gene sequence:

>984_bases
ATGATAGCTTACGAACGGTTTAAAAATGCCTTAACCCGAGGGGTTTTAAAACCCCTTTACCTTTTTTCCGGAGAAGAGCG
GTATTTTAAAGAGCGGCTTTTTGGGGAAATTAAAAAATATTTAGGAAGCAACCACGAGTTTAACTATGAAGAGCTGGATG
GTCATGAAGTTCTCCCTGAAGAAGTGGTAGCCAGGGCAGAAACGGTATCGTTTTTTGGGCAAAGGTTCATTGTTGTGAAA
AACTGTCGCTTTTTTTCCGGAAAACATGACGAGGAACCGCTTTTAAATTACCTGAAAAACCCGGCACCCCGGGCGGTGGT
TATTTTTTCCACAGAACTTCCTGTTGATAAGAAAAAGAAAATCTATCAGGAGTTTTTAAAAAATGGTGAGGAGATTGAAT
TTTCCCGGTTAGATGAAAAAGAAGTCCAGGAACTAATTAAAACCTGGGCGGACCGGGCAGGCTTTAATCTCGAACGGGAA
GCGTTGATAGTTTTAGCTCAGAGTTACGGGCAGAATTTAGTGGAGTTAGAAAAAGAGTTTAAAAAATTGGTTTTATATAA
ACTTTCGGAAAAGATCATTACTTTAAAAGATGTTTTGGAGGTTTCCGGCCAGGATCAAGAAATCTCGGTTTTTTATCTTG
TTGAAGAACTACTCTCCGGGAAAATAAACCGACCCAAGCTAAAAGAAAGGCTTACCAATCAGGAAGAAGCGGTTAAATTT
ACCGGGCTTGTGGCAAAAAACTTAAGGCAAATCTATACCGTAAAAGTTCTTCAGCAAAAAGGTAAAACACTGCAGGAAAT
TGCGAAAATTACCGGCATTCCCGAATGGCTGGTAAAAAAAACCTTAAGAAGTGCGGTGCACTTAAGTCAGGAAAAACTGA
AAAAAGGAATTACTGCCCTGGCGGATCTTGATGTAAAAATAAAATCCGGTGAAAGGGAGTTAACCGGATTATTTGAGAGA
TTTTTTCTATTAATGAAAAAATAA

Upstream 100 bases:

>100_bases
AATGTTAGAAAATATAACGGCATTCCACCCTTTGCGGAAACAAAGGATTATGTCCAAAAGGTGTTAAGGTGGCAGAAGTT
TTATCAAGGAGACGAGAGAA

Downstream 100 bases:

>100_bases
AAACCCGGAGTATCAGCCGGGTATTTTTTAGGATGCTTTATAAACGGAATTGAATTTCCGGGTGAGCCGGGATTTTTTTC
TGGAGGCGGTATTTTTATGA

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPEEVVARAETVSFFGQRFIVVK
NCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKKIYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLERE
ALIVLAQSYGQNLVELEKEFKKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITALADLDVKIKSGERELTGLFER
FFLLMKK

Sequences:

>Translated_327_residues
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPEEVVARAETVSFFGQRFIVVK
NCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKKIYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLERE
ALIVLAQSYGQNLVELEKEFKKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITALADLDVKIKSGERELTGLFER
FFLLMKK
>Mature_327_residues
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPEEVVARAETVSFFGQRFIVVK
NCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKKIYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLERE
ALIVLAQSYGQNLVELEKEFKKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITALADLDVKIKSGERELTGLFER
FFLLMKK

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 38031; Mature: 38031

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPE
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
EVVARAETVSFFGQRFIVVKNCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKK
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHH
IYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLEREALIVLAQSYGQNLVELEKEF
HHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
KKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHH
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITAL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLDVKIKSGERELTGLFERFFLLMKK
HHCCEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPE
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
EVVARAETVSFFGQRFIVVKNCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKK
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHH
IYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLEREALIVLAQSYGQNLVELEKEF
HHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
KKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHH
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITAL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLDVKIKSGERELTGLFERFFLLMKK
HHCCEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]