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The map label for this gene is ytqA [H]

Identifier: 78043108

GI number: 78043108

Start: 796976

End: 797926

Strand: Direct

Name: ytqA [H]

Synonym: CHY_0903

Alternate gene names: 78043108

Gene position: 796976-797926 (Clockwise)

Preceding gene: 78044480

Following gene: 78043913

Centisome position: 33.19

GC content: 41.85

Gene sequence:

>951_bases
ATGGAAAGGTATTATTCCTATACAAGGTATTTAAAGGAGAAATTTGGCGGCAAAGTATATAAAATTCCCGTGAATCTTCC
CCATACCTGCCCAAACCGCGATGGTACGGTGGGAACCGGTGGCTGTATTTTTTGCGAAGACTCGCCCGGGGGATTTGTTT
GTCTGCCCGATACCCGGGCCATATCTCAGAAAGTAGAGGAGTTAAAAAAGTATTTTCAAGATAAATTTAAAGCGCAAAAA
TTTATCGTTTATTTTCAGGCCTATACCAATACCTATCATCCGCTTGCGGTTTTCCGGGATTATATTTTAGCAGCGGTGGA
TAACACCGATATTGTTGGCCTCTCCGTTTCCACCCGACCCGATGCGGTAAACGATAAATACCTGGAGGTGCTGGCGGAGG
TAAAAAATAAAAAAAATATAGAAGTAGATGTGGAACTTGGTTTGCAGACGGTTAATTATAAAAACTTAATAGCGATAAAC
CGGGGCCATACCTTGGCCGAATTTATCGATGCGGTCTTGCGCATAAAAAAGTTTGGCTTAAATGTTACGACCCACTTAAT
TTTAAACCTGCCCGGGGAAACGTTAGTTGATGTCATTGAAAATGCCAAAATTATGTCAGCATTAAAGATAGATTTTGTAA
AGCTCCATACCCTGTTTATTCCAGAAAAAACGGTTTTAGGGGATATGTACCGGGAGGGGAAAATTGAGATTATACCCTTG
GAGGAATATGTCCAGTGGGTGGTAACCTTTTTGGAGTATTTAAGTCCGGAAGTGGTGGTGCAGCGGTTAATTGGAAAGGG
TCCCGATGAAGGGATTCTCTTTTCCAACTGGGGCGTCAGCTGGTGGAAAATTAAACATTTAATTGAGGAAGAGCTGGAAA
AAAGGGATACCCGACAGGGGGCAAAATGCGATTATTTAAACGGGAAGGCAGTACAAAAGTTTTTAAGCTAA

Upstream 100 bases:

>100_bases
CTTAAAACTTTTAGAATTAAAAGCTTTTTAACCCCCAATATTTCGGGGGTTTTATTTTTTCGGCAAATTTTGTTAAGATA
AAAGAAAAAAGGTGACGAAA

Downstream 100 bases:

>100_bases
GTTAGGGGGGCTTTTGGTGAAATTTATTGATCTTCGCAGTGATACGGTAACAACTCCTACTCCAAAGATGCGTGAGGCCA
TGTTTTCTGCCGAGGTAGGG

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MERYYSYTRYLKEKFGGKVYKIPVNLPHTCPNRDGTVGTGGCIFCEDSPGGFVCLPDTRAISQKVEELKKYFQDKFKAQK
FIVYFQAYTNTYHPLAVFRDYILAAVDNTDIVGLSVSTRPDAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAIN
RGHTLAEFIDAVLRIKKFGLNVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPL
EEYVQWVVTFLEYLSPEVVVQRLIGKGPDEGILFSNWGVSWWKIKHLIEEELEKRDTRQGAKCDYLNGKAVQKFLS

Sequences:

>Translated_316_residues
MERYYSYTRYLKEKFGGKVYKIPVNLPHTCPNRDGTVGTGGCIFCEDSPGGFVCLPDTRAISQKVEELKKYFQDKFKAQK
FIVYFQAYTNTYHPLAVFRDYILAAVDNTDIVGLSVSTRPDAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAIN
RGHTLAEFIDAVLRIKKFGLNVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPL
EEYVQWVVTFLEYLSPEVVVQRLIGKGPDEGILFSNWGVSWWKIKHLIEEELEKRDTRQGAKCDYLNGKAVQKFLS
>Mature_316_residues
MERYYSYTRYLKEKFGGKVYKIPVNLPHTCPNRDGTVGTGGCIFCEDSPGGFVCLPDTRAISQKVEELKKYFQDKFKAQK
FIVYFQAYTNTYHPLAVFRDYILAAVDNTDIVGLSVSTRPDAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAIN
RGHTLAEFIDAVLRIKKFGLNVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPL
EEYVQWVVTFLEYLSPEVVVQRLIGKGPDEGILFSNWGVSWWKIKHLIEEELEKRDTRQGAKCDYLNGKAVQKFLS

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=273, Percent_Identity=33.6996336996337, Blast_Score=167, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36143; Mature: 36143

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERYYSYTRYLKEKFGGKVYKIPVNLPHTCPNRDGTVGTGGCIFCEDSPGGFVCLPDTRA
CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHH
ISQKVEELKKYFQDKFKAQKFIVYFQAYTNTYHPLAVFRDYILAAVDNTDIVGLSVSTRP
HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEEECCCC
DAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAINRGHTLAEFIDAVLRIKKFGL
CCCCHHHHHHHHHHHCCCCCEEEEEECEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCC
NVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPL
CEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCEEEEEH
EEYVQWVVTFLEYLSPEVVVQRLIGKGPDEGILFSNWGVSWWKIKHLIEEELEKRDTRQG
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
AKCDYLNGKAVQKFLS
CCCCCCCCHHHHHHHC
>Mature Secondary Structure
MERYYSYTRYLKEKFGGKVYKIPVNLPHTCPNRDGTVGTGGCIFCEDSPGGFVCLPDTRA
CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHH
ISQKVEELKKYFQDKFKAQKFIVYFQAYTNTYHPLAVFRDYILAAVDNTDIVGLSVSTRP
HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEEECCCC
DAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAINRGHTLAEFIDAVLRIKKFGL
CCCCHHHHHHHHHHHCCCCCEEEEEECEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCC
NVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPL
CEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCEEEEEH
EEYVQWVVTFLEYLSPEVVVQRLIGKGPDEGILFSNWGVSWWKIKHLIEEELEKRDTRQG
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
AKCDYLNGKAVQKFLS
CCCCCCCCHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]