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The map label for this gene is 78042969

Identifier: 78042969

GI number: 78042969

Start: 174745

End: 174978

Strand: Direct

Name: 78042969

Synonym: CHY_0209

Alternate gene names: NA

Gene position: 174745-174978 (Clockwise)

Preceding gene: 78043669

Following gene: 78043729

Centisome position: 7.28

GC content: 42.74

Gene sequence:

>234_bases
ATGCAGATTGAAATTCGAGGGGCAGAAAAATTAAGCTTTCGCGAACGGCAAGTGGTAGTGCTAAAAGAAATGGGTTACAC
CAACGAACAGGTTGCCAAAAAATTAAAAATTAATGTGAGTTCCGTTGCCACCCTTTATAATCGTGCCAAAAGCAAAGGCT
ACCAGGTAGTGATAGTAATTCCAGGGGATCATCTGGGACTTTTTGATCCCGGGGATGAAGGGGAGGAAGAATAA

Upstream 100 bases:

>100_bases
AATTTAGTAAGATTTTGTCCACATTTTGTCCATAACTTGTCCAAAGTTTGTCCACAATTGTTAATAAACTGTGGATAAGT
TGTAAATAAGGTGAAGATAA

Downstream 100 bases:

>100_bases
TGCCGCGGTATTATGCCGGTTACAATAAAAAAAATAAGAAAAAAAACTTTTGGTCGGCGGTATTTTTGGCGTTTCTTTTA
TACATAATGGTGAGCTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma-; ECF Subfamily RNA Polymerase Sigma-24 Factor; Transcriptional Regulator LuxR Family; Regulatory Protein LuxR

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MQIEIRGAEKLSFRERQVVVLKEMGYTNEQVAKKLKINVSSVATLYNRAKSKGYQVVIVIPGDHLGLFDPGDEGEEE

Sequences:

>Translated_77_residues
MQIEIRGAEKLSFRERQVVVLKEMGYTNEQVAKKLKINVSSVATLYNRAKSKGYQVVIVIPGDHLGLFDPGDEGEEE
>Mature_77_residues
MQIEIRGAEKLSFRERQVVVLKEMGYTNEQVAKKLKINVSSVATLYNRAKSKGYQVVIVIPGDHLGLFDPGDEGEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8651; Mature: 8651

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIEIRGAEKLSFRERQVVVLKEMGYTNEQVAKKLKINVSSVATLYNRAKSKGYQVVIVI
CEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEE
PGDHLGLFDPGDEGEEE
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIEIRGAEKLSFRERQVVVLKEMGYTNEQVAKKLKINVSSVATLYNRAKSKGYQVVIVI
CEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEE
PGDHLGLFDPGDEGEEE
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA