| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78043729
Identifier: 78043729
GI number: 78043729
Start: 174978
End: 175301
Strand: Direct
Name: 78043729
Synonym: CHY_0210
Alternate gene names: NA
Gene position: 174978-175301 (Clockwise)
Preceding gene: 78042969
Following gene: 78043933
Centisome position: 7.29
GC content: 37.35
Gene sequence:
>324_bases ATGCCGCGGTATTATGCCGGTTACAATAAAAAAAATAAGAAAAAAAACTTTTGGTCGGCGGTATTTTTGGCGTTTCTTTT ATACATAATGGTGAGCTTTGGTTTTGAGGTTTACAAACTTTACATTATGCACCGGGAAGTTAAAGCTCTATCGGCAGAGG TTTATGAGCTAAAAGCGGATAATGAGAAGCTGTTAGAAGATATTAAGAGGCTAAAAAATAACTCGCACTTTGAAACTCGC GCCAGGGAGATGGGGTTTGTAAAACCTGGAGAAAAAGTAATTGTAATTGAAAAGAAGGGAAATAAAGATGCCAGCAGTGA TTGA
Upstream 100 bases:
>100_bases TTTATAATCGTGCCAAAAGCAAAGGCTACCAGGTAGTGATAGTAATTCCAGGGGATCATCTGGGACTTTTTGATCCCGGG GATGAAGGGGAGGAAGAATA
Downstream 100 bases:
>100_bases TATCGGAACAAATTCGGTACGGGTTTTAGTTGGTTCTTTTAACAATGGTAAATTTTACGAAGAGTACCGGGACTTGAGGA CCACCCGTATTGGCCAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPRYYAGYNKKNKKKNFWSAVFLAFLLYIMVSFGFEVYKLYIMHREVKALSAEVYELKADNEKLLEDIKRLKNNSHFETR AREMGFVKPGEKVIVIEKKGNKDASSD
Sequences:
>Translated_107_residues MPRYYAGYNKKNKKKNFWSAVFLAFLLYIMVSFGFEVYKLYIMHREVKALSAEVYELKADNEKLLEDIKRLKNNSHFETR AREMGFVKPGEKVIVIEKKGNKDASSD >Mature_106_residues PRYYAGYNKKNKKKNFWSAVFLAFLLYIMVSFGFEVYKLYIMHREVKALSAEVYELKADNEKLLEDIKRLKNNSHFETRA REMGFVKPGEKVIVIEKKGNKDASSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12607; Mature: 12476
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYYAGYNKKNKKKNFWSAVFLAFLLYIMVSFGFEVYKLYIMHREVKALSAEVYELKAD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC NEKLLEDIKRLKNNSHFETRAREMGFVKPGEKVIVIEKKGNKDASSD CHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PRYYAGYNKKNKKKNFWSAVFLAFLLYIMVSFGFEVYKLYIMHREVKALSAEVYELKAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC NEKLLEDIKRLKNNSHFETRAREMGFVKPGEKVIVIEKKGNKDASSD CHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA