Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78042967

Identifier: 78042967

GI number: 78042967

Start: 266433

End: 267338

Strand: Direct

Name: 78042967

Synonym: CHY_0303

Alternate gene names: NA

Gene position: 266433-267338 (Clockwise)

Preceding gene: 78043927

Following gene: 78044861

Centisome position: 11.09

GC content: 43.71

Gene sequence:

>906_bases
GTGAAAAGGGTTGTCAGTGTAAGCCTGGGTTCCTCCAAGCGCGACAAAGCAACCGAGGCGGAATTTTTGGGAGAAAAATT
TATTATCGAGCGCCGGGGTACCGATGGGGATTATAATAAAGCATTGCAGGTTTTAAAAGAATTAGATGGTAAAGTAGATG
CTATTGGACTTGGCGGGATAGATGTCTATCTTTATGCCGGAGGACGCCGGTATGCTATAAAAGATGGGCTGCGGCTTTTG
CAGGCGGTTAAAATTACTCCGGCGGTAGATGGAAGCGGCCTCAAAAATACTTTAGAGCGGGAAGTGGTGCGGGAACTTGC
CCGCATGGGAATTATCACCCCTAAAAGCAAGGTGCTGCTGGTTTCCGCCGTGGACCGTTTTGGTATGGCGGAGGCGTTAG
CCGAAACCGGTGCGGAAGTAATTTTTGGCGATTTAATTTTTGCCCTGGGAATTCCCATTCCTATTAAGAAAATAAGCACT
TTAAATTTCTTAGCGGCTATACTACTGCCAATTATTACCAAGCTACCATTTCAGATTCTTTATCCTACGGGCAAGGAACA
AGAAGTTAGAGAAAAGAAAAGTAAGAATGACCGGTATTACCACTGGGCGGATATTATTGCCGGGGATTACCTCTATATAA
AGAAACATTTACCGGAGCGGATCGATGGCAAGATAATTTTAACCAATACTACTACCCGGGAAGATGTGGAGGAGTTAAAA
GCCAAAGGGGCTAAAATGTTAGTGACAACTACTCCGGTTTTAAACGGACGCTCCTTTGGAACCAACGTTATGGAAGGGGT
ACTTTTAACCCTGTTAAACAAAAAATGGGAGGAAGTAACTCCCGAGGATTATTTAAGACTTTTAAAGGAGCTGGGCTTTA
AGCCCAATATAATTGAGTTAAATTAA

Upstream 100 bases:

>100_bases
TTTTTTAGGTATTGTTCTCGGTAAAAGCTTTCGATAGTAATGCACAACTCCTTTTTTGGTGGTAAAATTATATAAAGACC
GAAAAAAAGGAGCGGGTGCA

Downstream 100 bases:

>100_bases
TCATAGATCCTTAAAAGTTTATACATTTCCATGTTTATCCGATTATCAGAGGGTAGGCCGTAGTCAGCACGAAATTTAAC
TACGGCCTTTTCCATTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Dehydrogenase-Like Protein; Dehydrogenase-Like; Dehydrogenase

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKRVVSVSLGSSKRDKATEAEFLGEKFIIERRGTDGDYNKALQVLKELDGKVDAIGLGGIDVYLYAGGRRYAIKDGLRLL
QAVKITPAVDGSGLKNTLEREVVRELARMGIITPKSKVLLVSAVDRFGMAEALAETGAEVIFGDLIFALGIPIPIKKIST
LNFLAAILLPIITKLPFQILYPTGKEQEVREKKSKNDRYYHWADIIAGDYLYIKKHLPERIDGKIILTNTTTREDVEELK
AKGAKMLVTTTPVLNGRSFGTNVMEGVLLTLLNKKWEEVTPEDYLRLLKELGFKPNIIELN

Sequences:

>Translated_301_residues
MKRVVSVSLGSSKRDKATEAEFLGEKFIIERRGTDGDYNKALQVLKELDGKVDAIGLGGIDVYLYAGGRRYAIKDGLRLL
QAVKITPAVDGSGLKNTLEREVVRELARMGIITPKSKVLLVSAVDRFGMAEALAETGAEVIFGDLIFALGIPIPIKKIST
LNFLAAILLPIITKLPFQILYPTGKEQEVREKKSKNDRYYHWADIIAGDYLYIKKHLPERIDGKIILTNTTTREDVEELK
AKGAKMLVTTTPVLNGRSFGTNVMEGVLLTLLNKKWEEVTPEDYLRLLKELGFKPNIIELN
>Mature_301_residues
MKRVVSVSLGSSKRDKATEAEFLGEKFIIERRGTDGDYNKALQVLKELDGKVDAIGLGGIDVYLYAGGRRYAIKDGLRLL
QAVKITPAVDGSGLKNTLEREVVRELARMGIITPKSKVLLVSAVDRFGMAEALAETGAEVIFGDLIFALGIPIPIKKIST
LNFLAAILLPIITKLPFQILYPTGKEQEVREKKSKNDRYYHWADIIAGDYLYIKKHLPERIDGKIILTNTTTREDVEELK
AKGAKMLVTTTPVLNGRSFGTNVMEGVLLTLLNKKWEEVTPEDYLRLLKELGFKPNIIELN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33517; Mature: 33517

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVVSVSLGSSKRDKATEAEFLGEKFIIERRGTDGDYNKALQVLKELDGKVDAIGLGGI
CCEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCE
DVYLYAGGRRYAIKDGLRLLQAVKITPAVDGSGLKNTLEREVVRELARMGIITPKSKVLL
EEEEEECCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
VSAVDRFGMAEALAETGAEVIFGDLIFALGIPIPIKKISTLNFLAAILLPIITKLPFQIL
EEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
YPTGKEQEVREKKSKNDRYYHWADIIAGDYLYIKKHLPERIDGKIILTNTTTREDVEELK
CCCCCHHHHHHHHCCCCCEEEEHHHHHCCHHEEHHHCCHHHCCEEEEECCCCHHHHHHHH
AKGAKMLVTTTPVLNGRSFGTNVMEGVLLTLLNKKWEEVTPEDYLRLLKELGFKPNIIEL
HCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
N
C
>Mature Secondary Structure
MKRVVSVSLGSSKRDKATEAEFLGEKFIIERRGTDGDYNKALQVLKELDGKVDAIGLGGI
CCEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCE
DVYLYAGGRRYAIKDGLRLLQAVKITPAVDGSGLKNTLEREVVRELARMGIITPKSKVLL
EEEEEECCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
VSAVDRFGMAEALAETGAEVIFGDLIFALGIPIPIKKISTLNFLAAILLPIITKLPFQIL
EEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
YPTGKEQEVREKKSKNDRYYHWADIIAGDYLYIKKHLPERIDGKIILTNTTTREDVEELK
CCCCCHHHHHHHHCCCCCEEEEHHHHHCCHHEEHHHCCHHHCCEEEEECCCCHHHHHHHH
AKGAKMLVTTTPVLNGRSFGTNVMEGVLLTLLNKKWEEVTPEDYLRLLKELGFKPNIIEL
HCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA