| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is vorB [H]
Identifier: 78042939
GI number: 78042939
Start: 1167031
End: 1168113
Strand: Direct
Name: vorB [H]
Synonym: CHY_1311
Alternate gene names: 78042939
Gene position: 1167031-1168113 (Clockwise)
Preceding gene: 78044600
Following gene: 78043485
Centisome position: 48.6
GC content: 39.52
Gene sequence:
>1083_bases ATGGGTAAAGTATTATTTAAAGGTGCTGAAGCCATTGCGGAAGCTGCCATTCGAAGTGGATGTAAATTTTTCTTTGGCTA TCCAATTACGCCTCAGACTGAAGTAGCTGAATATATGGCAAAAAGGTTACCGCAAGTTGGGGGAGTTTACCTTCAAGCGG AAAGTGAAGTTTCAGCTATTAATATGGTATTTGGGGCAGCTGCTACAGGAGCACGGGTTATGACATCTTCATCCAGTCCT GGTGTGAGCTTAAAGCAAGAGGGGATTTCTTATATTGCAGGAGCTGAATTACCTTGTGTTGTTGTAAATATCATGCGTGG TGGACCTGGTTTAGGTTGTATTCAGGCAGCCCAATCAGATTATTTTCAAGCGGTAAAAGGTGGCGGACATGGAGACTATA AAAACATTGTTTTAGCACCGTCAACTGTTCAAGAAGCGGTTGATTTAGTGTCTCTTGCCTTTGATTTAGCAGATAAATAT AGAAATCCAGTAATGATTTTAGGAGATGCGGTTCTTGCACAAATAATGGAGCCGATTGAATTACCTGAAGAGAAAAAGGA ATTGCCTGAAAAACCATGGGCAATTACTGGTTGCAGTAATCGGGAGCAAAATATAATTACCTCATCATACCCGGTACCTG AGGATTTAGAAGCTGTAAATGAAAGGCTCAATGCAAAGTATAAGCAGATTATAAAAGAAGAACAACGCTGGGAAGAAGAT GGGGTAGATGATGCAGAGTTGGTTTTTGTTGCATATGGAACTAGTGCCCGGATAGCAAAAGATGCTGTTGAAACTTTAAG AAATAAAGGAAAGAAAGTTGGTTTGATTAGACCAATAACCTTATGGCCTTTCCCGAAAAAAGCGTTTAAGAATAGAATGG CGGGCAAGAAAATATTAGTAGTTGAGATGAGCAAAGGACAAATGGTCGAAGACGTTGAAATTGCAGTTAAAGGTCAAGGC GAAATTTATTTCTATGGAAGAACAGGTGGCATTGTGCCCTATGTTGAAGAAGTTCTCGAAGTAGCTGAAGCTATTTTAAA CAATGAAAATGTTAAAAAATGGGGGGAAGATGATGAAAACTAA
Upstream 100 bases:
>100_bases TATGCAACCATTTCAAATATTGAAGAATGTATTGGCTGTGGAAGATGCTATCAGATTTGCCCTGACCTGGTATTTGAAGT GAAAGAGGAGGCGAAGATTA
Downstream 100 bases:
>100_bases AGAGTACATTCGTCCAAAAAGTTTAAAGCCTACCCAAACCCACTACTGTCCAGGGTGTACTCATGGGATTATCCATCGGA TTTTAGCTGAAGTCTTAGAT
Product: 2-ketoisovalerate ferredoxin reductase
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSP GVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKY RNPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQG EIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN
Sequences:
>Translated_360_residues MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSP GVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKY RNPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQG EIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN >Mature_359_residues GKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSPG VSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYR NPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEEDG VDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQGE IYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 39261; Mature: 39130
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAI CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCHHCCEEEEECCCHHHH NMVFGAAATGARVMTSSSSPGVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSD HHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH YFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYRNPVMILGDAVLAQIMEPIE HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHC LPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED CCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILV CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEECCCCHHHHHHHCCCCEEEE VEMSKGQMVEDVEIAVKGQGEIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN EECCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC >Mature Secondary Structure GKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAI CCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCHHCCEEEEECCCHHHH NMVFGAAATGARVMTSSSSPGVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSD HHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH YFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYRNPVMILGDAVLAQIMEPIE HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHC LPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED CCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILV CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEECCCCHHHHHHHCCCCEEEE VEMSKGQMVEDVEIAVKGQGEIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN EECCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]