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The map label for this gene is rnfC [C]

Identifier: 78044600

GI number: 78044600

Start: 1166820

End: 1167038

Strand: Direct

Name: rnfC [C]

Synonym: CHY_1310

Alternate gene names: 78044600

Gene position: 1166820-1167038 (Clockwise)

Preceding gene: 78044047

Following gene: 78042939

Centisome position: 48.59

GC content: 31.51

Gene sequence:

>219_bases
TTGAAAGTAACTGTTGATTATGAACGGTGTAAAGGTTGTGGATTATGTATTGATGTTTGTCCTAAAAAAATTATTTATTT
AAATCAAGATTTTAACAGTAAAGGTTATTATTATGCAACCATTTCAAATATTGAAGAATGTATTGGCTGTGGAAGATGCT
ATCAGATTTGCCCTGACCTGGTATTTGAAGTGAAAGAGGAGGCGAAGATTAATGGGTAA

Upstream 100 bases:

>100_bases
AGATTGCAAGGTGATAGCCTTTGAGGTTGCTGATGCGATTTTTAGTCAATATCCCCAGAAAGAAAAAATTTTAAATCAAT
ATTAAAAGAGGTGATAAGAA

Downstream 100 bases:

>100_bases
AGTATTATTTAAAGGTGCTGAAGCCATTGCGGAAGCTGCCATTCGAAGTGGATGTAAATTTTTCTTTGGCTATCCAATTA
CGCCTCAGACTGAAGTAGCT

Product: putative keto/oxoacid ferredoxin oxidoreductase subunit delta

Products: NA

Alternate protein names: Ferredoxin; Keto/Oxoacid Ferredoxin Oxidoreductase Subunit Delta; 2-Oxoisovalerate Oxidoreductase Gamma Subunit; 2-Oxoglutarate Synthase Delta Subunit; Ketoisovalerate Oxidoreductase Subunit VorC; 2-Ketoglutarate Ferredoxin Oxidoreductase Subunit Delta; 2-Oxoacid Oxidoreductase Subunit Delta; 3-Methyl-2-Oxobutanoate Dehydrogenase Delta Subunit

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKVTVDYERCKGCGLCIDVCPKKIIYLNQDFNSKGYYYATISNIEECIGCGRCYQICPDLVFEVKEEAKING

Sequences:

>Translated_72_residues
MKVTVDYERCKGCGLCIDVCPKKIIYLNQDFNSKGYYYATISNIEECIGCGRCYQICPDLVFEVKEEAKING
>Mature_72_residues
MKVTVDYERCKGCGLCIDVCPKKIIYLNQDFNSKGYYYATISNIEECIGCGRCYQICPDLVFEVKEEAKING

Specific function: May Be Part Of A Membrane Complex Involved In Electron Transport (By Similarity). [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Inner membrane-associated (By similarity) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8201; Mature: 8201

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
11.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTVDYERCKGCGLCIDVCPKKIIYLNQDFNSKGYYYATISNIEECIGCGRCYQICPDL
CEEECCHHHCCCCCEEHCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHH
VFEVKEEAKING
HHHHHHHCCCCC
>Mature Secondary Structure
MKVTVDYERCKGCGLCIDVCPKKIIYLNQDFNSKGYYYATISNIEECIGCGRCYQICPDL
CEEECCHHHCCCCCEEHCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHH
VFEVKEEAKING
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA