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The map label for this gene is ctpA [H]

Identifier: 78042870

GI number: 78042870

Start: 143710

End: 144843

Strand: Direct

Name: ctpA [H]

Synonym: CHY_0170

Alternate gene names: 78042870

Gene position: 143710-144843 (Clockwise)

Preceding gene: 78043269

Following gene: 78044822

Centisome position: 5.98

GC content: 45.59

Gene sequence:

>1134_bases
TTGTCCAGGAAAAAAATTATTGCTTTAGTAGTGGTTGTCTTCTTACTCTGGGGGATATTTTCGTTAGCCGGTTTATTCTG
GAAAAAGAGCGGGGATAAGATAGAGACTTTACTTACGGTAATTGCTTTAATTAAAAGCCAGTATTATCAGCCGGTTTCTA
CCGAAAAACTTATAAACGGTGCAATAAAAGGTATGGTCGAAGGCCTGGACGACCCGTATTCGACTTATCTTGATCCCGAA
CAATTTAAACACTTAAACGAGCAAATTACCGGAACTTTTGGCGGTGTAGGGTTGATTGTGACGATGGAAGAAAATCATAT
TGTGGTGGTAAAGCCCATTCCCGATACTCCCGCCGCCAAGGCCGGTATCAAGGCGGGGGATATCATTGTAAACATTTCCG
GCAGGGATACCAAAGGGATGGACCTGGACACGGCGGTTAGTTTAATGCGAGGTCCGGTGGGAACCCGGGTGGAAGTAGGA
ATATTGCGACCCGGTGAAAAAGAAACCCGGATGTTTACGTTGGTTCGAGAAAATATTACCATTCCCACCGTGGAAAGCAA
AATGTTAGATGACAAGATAGGCTATATTATGTTATCCCAGTTTACCGAAAACTCACCCCAAGCGGTGCGAAAAGCAATCG
GAGATTTAAAGAAAAAAGGGATGAAAGGCTTAATTTTTGATTTACGGGACAATCCCGGGGGAGAGCTTAAGGCTGCGGTT
GAGATTGCTGATATTTTTGTTCCCCGGGGAAAAACTATTGTGTATGTGGATTACCGGAATCAGCCGGATGAAGAGGAAAA
GGCAGAGGTGCCGGAGTTAGGAATTCCGGTGGTGGTTCTTGTAAACGGGGGCAGCGCCAGTGCTTCGGAAATTGTGGCCG
GTGCTCTGAAAGATTGGGGAGTGGCGGTTTTGGTTGGGGAAAAAACTTTCGGGAAGGGTGTGGTGCAATCAATCTTCAGG
TTACCGGGAAATGCCGGTTTAAAGCTAACCGTAGCCCGTTACTTAACTCCCAAGAAGCATGACATCAACAAAAAAGGCAT
CATGCCGGATGTAGTAGTAAAACAGCCGGCGGGAAGCAAGGAAGACCGGCAGCTCTTAAAAGCCAAAGAAATATTGGCGG
AAAAGATTAAATAA

Upstream 100 bases:

>100_bases
CGTGTCTTTTCTTTGTATGTAGCATATCTTGGAGAAAAGTGATAGTATAATATTATTAATGCATTTACAAACTAAAGCAG
CGGCTGTGAGGTGCATGTAA

Downstream 100 bases:

>100_bases
GCGAGGGGCTTTCATGATTTGGGTGAAATTAGCTGGTAATACCCTTTATACCGTGTTTTTAGCTTTAATGGAAAATCCGG
TATTCTGGCTGTTAGTTTTA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal processing protease [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSRKKIIALVVVVFLLWGIFSLAGLFWKKSGDKIETLLTVIALIKSQYYQPVSTEKLINGAIKGMVEGLDDPYSTYLDPE
QFKHLNEQITGTFGGVGLIVTMEENHIVVVKPIPDTPAAKAGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVG
ILRPGEKETRMFTLVRENITIPTVESKMLDDKIGYIMLSQFTENSPQAVRKAIGDLKKKGMKGLIFDLRDNPGGELKAAV
EIADIFVPRGKTIVYVDYRNQPDEEEKAEVPELGIPVVVLVNGGSASASEIVAGALKDWGVAVLVGEKTFGKGVVQSIFR
LPGNAGLKLTVARYLTPKKHDINKKGIMPDVVVKQPAGSKEDRQLLKAKEILAEKIK

Sequences:

>Translated_377_residues
MSRKKIIALVVVVFLLWGIFSLAGLFWKKSGDKIETLLTVIALIKSQYYQPVSTEKLINGAIKGMVEGLDDPYSTYLDPE
QFKHLNEQITGTFGGVGLIVTMEENHIVVVKPIPDTPAAKAGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVG
ILRPGEKETRMFTLVRENITIPTVESKMLDDKIGYIMLSQFTENSPQAVRKAIGDLKKKGMKGLIFDLRDNPGGELKAAV
EIADIFVPRGKTIVYVDYRNQPDEEEKAEVPELGIPVVVLVNGGSASASEIVAGALKDWGVAVLVGEKTFGKGVVQSIFR
LPGNAGLKLTVARYLTPKKHDINKKGIMPDVVVKQPAGSKEDRQLLKAKEILAEKIK
>Mature_376_residues
SRKKIIALVVVVFLLWGIFSLAGLFWKKSGDKIETLLTVIALIKSQYYQPVSTEKLINGAIKGMVEGLDDPYSTYLDPEQ
FKHLNEQITGTFGGVGLIVTMEENHIVVVKPIPDTPAAKAGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVGI
LRPGEKETRMFTLVRENITIPTVESKMLDDKIGYIMLSQFTENSPQAVRKAIGDLKKKGMKGLIFDLRDNPGGELKAAVE
IADIFVPRGKTIVYVDYRNQPDEEEKAEVPELGIPVVVLVNGGSASASEIVAGALKDWGVAVLVGEKTFGKGVVQSIFRL
PGNAGLKLTVARYLTPKKHDINKKGIMPDVVVKQPAGSKEDRQLLKAKEILAEKIK

Specific function: Involved In The Cleavage Of A C-Terminal Peptide Of 11 Residues From The Precursor Form Of Penicillin-Binding Protein 3 (Pbp3). May Be Involved In Protection Of The Bacterium From Thermal And Osmotic Stresses. [C]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Associated With The Periplasmic Protein Side Of The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=318, Percent_Identity=33.0188679245283, Blast_Score=144, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41; PF01471 PG_binding_1 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 41060; Mature: 40928

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKKIIALVVVVFLLWGIFSLAGLFWKKSGDKIETLLTVIALIKSQYYQPVSTEKLING
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AIKGMVEGLDDPYSTYLDPEQFKHLNEQITGTFGGVGLIVTMEENHIVVVKPIPDTPAAK
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCCCHH
AGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVGILRPGEKETRMFTLVRENIT
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEEEECCCCC
IPTVESKMLDDKIGYIMLSQFTENSPQAVRKAIGDLKKKGMKGLIFDLRDNPGGELKAAV
CCCHHHHHHHHHHCEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHE
EIADIFVPRGKTIVYVDYRNQPDEEEKAEVPELGIPVVVLVNGGSASASEIVAGALKDWG
EEEEEEECCCCEEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
VAVLVGEKTFGKGVVQSIFRLPGNAGLKLTVARYLTPKKHDINKKGIMPDVVVKQPAGSK
EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCH
EDRQLLKAKEILAEKIK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRKKIIALVVVVFLLWGIFSLAGLFWKKSGDKIETLLTVIALIKSQYYQPVSTEKLING
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AIKGMVEGLDDPYSTYLDPEQFKHLNEQITGTFGGVGLIVTMEENHIVVVKPIPDTPAAK
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCCCHH
AGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVGILRPGEKETRMFTLVRENIT
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEEEECCCCC
IPTVESKMLDDKIGYIMLSQFTENSPQAVRKAIGDLKKKGMKGLIFDLRDNPGGELKAAV
CCCHHHHHHHHHHCEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHE
EIADIFVPRGKTIVYVDYRNQPDEEEKAEVPELGIPVVVLVNGGSASASEIVAGALKDWG
EEEEEEECCCCEEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
VAVLVGEKTFGKGVVQSIFRLPGNAGLKLTVARYLTPKKHDINKKGIMPDVVVKQPAGSK
EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCH
EDRQLLKAKEILAEKIK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8996100; 9734814; 9384377 [H]