Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78042812

Identifier: 78042812

GI number: 78042812

Start: 2296549

End: 2296683

Strand: Direct

Name: 78042812

Synonym: CHY_2579

Alternate gene names: NA

Gene position: 2296549-2296683 (Clockwise)

Preceding gene: 78042769

Following gene: 78044034

Centisome position: 95.63

GC content: 37.78

Gene sequence:

>135_bases
TTGCACCTTTTATCACCTAAGTACATTATATCTTATCCGCTAAATTTTTGCTTTAAAAAAGTTTTTCCAGAAAATAAAAC
GCCCAGGAGCGTCGTAATGCCGGCTAAATTTAAAGCGGGCCAAAGCCCGCTTTAA

Upstream 100 bases:

>100_bases
TGCCGAGAGCAAAGACAGCCGCCCGGGTAAAATTTTGATTTGCAAGAAAATACAGTGGAACTATCAAGAAAAAAAATAAT
AAGCCGTAAGCTACCTTTCT

Downstream 100 bases:

>100_bases
ATCTTTTTTAACCTCCCTGAAAATGGATGCTCACAGAACCGTCCCTAAAACCACCATTTTTATTTCGTTTAAGAGGAGGT
CTAATTTTTCTTCGCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MHLLSPKYIISYPLNFCFKKVFPENKTPRSVVMPAKFKAGQSPL

Sequences:

>Translated_44_residues
MHLLSPKYIISYPLNFCFKKVFPENKTPRSVVMPAKFKAGQSPL
>Mature_44_residues
MHLLSPKYIISYPLNFCFKKVFPENKTPRSVVMPAKFKAGQSPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5054; Mature: 5054

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLLSPKYIISYPLNFCFKKVFPENKTPRSVVMPAKFKAGQSPL
CCCCCCCEEEECCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MHLLSPKYIISYPLNFCFKKVFPENKTPRSVVMPAKFKAGQSPL
CCCCCCCEEEECCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA