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The map label for this gene is 78042798

Identifier: 78042798

GI number: 78042798

Start: 173044

End: 173982

Strand: Direct

Name: 78042798

Synonym: CHY_0206

Alternate gene names: NA

Gene position: 173044-173982 (Clockwise)

Preceding gene: 78045062

Following gene: 78043519

Centisome position: 7.21

GC content: 46.43

Gene sequence:

>939_bases
ATGCGCCTTGGGAAAAGTCTTTTAGCCTTGACGGTAATGTTTGTTCTCATAATTTACGGTTGCACTCCCGCAAGAAAGCC
TTTAGCCCTCAAAAAATATAGAACCGAACCCACCGTTACAGTTTACTTCAATGAGACCGGGGAAAAAAAGAAGATGAAAT
TGGAAGAATACGTCCTGGGAGTTGTAGCGGCGGAAATGGAACCGGATTGGCCGGTTAATGCTTTAGCGGCGCAGGCAATT
TTAGCTCGAACTTTTGCCCTGGAGAATATTGAAAGTGGAAAGGTGAGAAAGCTTCACGGTACCGATGTTTCCACCGATAT
CGAAGAGAGCCAGGCGTATGACCCGAAAAAAATTACGGAAAATGTAAAGAAAGCGGTGCAAATGACCCGGGGTCAAGTGG
TACTTTACAAGGGGCATTTTATCAAAGCCTGGTTTAATGCCTGCGACGGTGGGATTTCGGCTTCGGCCAGGGAAGGATTA
AGTTATACCAAAACTCCTACTCCCTACGTCAAAGAGTTAGTGAAAGATGGCTGTCTTAAAGTTACCATTCCGGAAAACCG
CCACTGGCGGGTAGAGATACCCTGGGAGGAGATTCGAAAGGTGTTAAAAACAAATTATAAAACCGATCCAGGTCCTAACC
CTGCGGTAAAGGTATTAGCCCGGGGTAAAAGCGGGCGAGTGTTAACTCTGCGGGTTGGAACGGCCACCGTTGGAGCGCCG
GCTTTGAGATTAGCCCTTGGACCGGAAAAAATGCGTTCCACATTGTTAACGAAAATTTTTGTGGAAAACGGTAAGCTAAT
CATGGAGGGAAAAGGCTTTGGCCATGGTGTCGGCCTTTGCCAGTGGGGGGCCAATAAAATGGCCCGGGAAGGTAAGTCAC
CGGAAGAAATCATCAGGTTTTATTTTAAAGATATTGAAATTAAAAAACTCTGGCGGTAG

Upstream 100 bases:

>100_bases
TAATAAAAAAGCCAGGTGCCTAAAGCATCTGGCTTTTTTCTGTGTTTGCATAACCCTTCCTCTTTTTGGACAAAATAACC
AAAAATTGAGGAGGGGTTTT

Downstream 100 bases:

>100_bases
GAAGTTATGCGGGCATAATTCCCTTTATGCCCGCATAATTATTTTGTAAGGTCGAAAGGGGGGGAAGTATGGACGAGGCT
ACTTTGCATAAAGTAGAAAT

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRLGKSLLALTVMFVLIIYGCTPARKPLALKKYRTEPTVTVYFNETGEKKKMKLEEYVLGVVAAEMEPDWPVNALAAQAI
LARTFALENIESGKVRKLHGTDVSTDIEESQAYDPKKITENVKKAVQMTRGQVVLYKGHFIKAWFNACDGGISASAREGL
SYTKTPTPYVKELVKDGCLKVTIPENRHWRVEIPWEEIRKVLKTNYKTDPGPNPAVKVLARGKSGRVLTLRVGTATVGAP
ALRLALGPEKMRSTLLTKIFVENGKLIMEGKGFGHGVGLCQWGANKMAREGKSPEEIIRFYFKDIEIKKLWR

Sequences:

>Translated_312_residues
MRLGKSLLALTVMFVLIIYGCTPARKPLALKKYRTEPTVTVYFNETGEKKKMKLEEYVLGVVAAEMEPDWPVNALAAQAI
LARTFALENIESGKVRKLHGTDVSTDIEESQAYDPKKITENVKKAVQMTRGQVVLYKGHFIKAWFNACDGGISASAREGL
SYTKTPTPYVKELVKDGCLKVTIPENRHWRVEIPWEEIRKVLKTNYKTDPGPNPAVKVLARGKSGRVLTLRVGTATVGAP
ALRLALGPEKMRSTLLTKIFVENGKLIMEGKGFGHGVGLCQWGANKMAREGKSPEEIIRFYFKDIEIKKLWR
>Mature_312_residues
MRLGKSLLALTVMFVLIIYGCTPARKPLALKKYRTEPTVTVYFNETGEKKKMKLEEYVLGVVAAEMEPDWPVNALAAQAI
LARTFALENIESGKVRKLHGTDVSTDIEESQAYDPKKITENVKKAVQMTRGQVVLYKGHFIKAWFNACDGGISASAREGL
SYTKTPTPYVKELVKDGCLKVTIPENRHWRVEIPWEEIRKVLKTNYKTDPGPNPAVKVLARGKSGRVLTLRVGTATVGAP
ALRLALGPEKMRSTLLTKIFVENGKLIMEGKGFGHGVGLCQWGANKMAREGKSPEEIIRFYFKDIEIKKLWR

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 34894; Mature: 34894

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGKSLLALTVMFVLIIYGCTPARKPLALKKYRTEPTVTVYFNETGEKKKMKLEEYVLG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
VVAAEMEPDWPVNALAAQAILARTFALENIESGKVRKLHGTDVSTDIEESQAYDPKKITE
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCHHHHHH
NVKKAVQMTRGQVVLYKGHFIKAWFNACDGGISASAREGLSYTKTPTPYVKELVKDGCLK
HHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEE
VTIPENRHWRVEIPWEEIRKVLKTNYKTDPGPNPAVKVLARGKSGRVLTLRVGTATVGAP
EEECCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCEEEEEECCCCCCCC
ALRLALGPEKMRSTLLTKIFVENGKLIMEGKGFGHGVGLCQWGANKMAREGKSPEEIIRF
HHEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHCCHHHHHCCCCHHHHHHH
YFKDIEIKKLWR
HHHCCHHHHHCC
>Mature Secondary Structure
MRLGKSLLALTVMFVLIIYGCTPARKPLALKKYRTEPTVTVYFNETGEKKKMKLEEYVLG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
VVAAEMEPDWPVNALAAQAILARTFALENIESGKVRKLHGTDVSTDIEESQAYDPKKITE
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCHHHHHH
NVKKAVQMTRGQVVLYKGHFIKAWFNACDGGISASAREGLSYTKTPTPYVKELVKDGCLK
HHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEE
VTIPENRHWRVEIPWEEIRKVLKTNYKTDPGPNPAVKVLARGKSGRVLTLRVGTATVGAP
EEECCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCEEEEEECCCCCCCC
ALRLALGPEKMRSTLLTKIFVENGKLIMEGKGFGHGVGLCQWGANKMAREGKSPEEIIRF
HHEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEHHCCHHHHHCCCCHHHHHHH
YFKDIEIKKLWR
HHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA