| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is fur [H]
Identifier: 78042705
GI number: 78042705
Start: 564311
End: 564733
Strand: Direct
Name: fur [H]
Synonym: CHY_0651
Alternate gene names: 78042705
Gene position: 564311-564733 (Clockwise)
Preceding gene: 78045154
Following gene: 78043378
Centisome position: 23.5
GC content: 47.75
Gene sequence:
>423_bases ATGAATGTAAGAGAAGCATATAAAATTTTACGGGATAAGGGCATAAAGATTACACCGCAGCGGCAGGCGCTTTTAGAGCT TTTTGCCGATGAAAAAAGCTATACCGCCCGGGAGATTGCCGAAAAATTGCGCCGGCATTACCCTGGTTTTAGTTTCGATA CCGTTTACCGTAACTTAAAGCTTTACTGCCGGTGCGGGATTTTAACCGAGACCATGGCGCCGGACGGGATAGCCCGCTTT TCCTTAAATACCGGACAGCACCGCCATTATTTCACCTGCCTTGCCTGCGGGGAGAAAGTGGCCCTGGAATCGTGTCCTAT TGAAGAAAATAAATTTAACCTTCCGGGAAAAGTGGGGACGATAACGTATCACCGGATTGAACTTTTTGGAAAGTGTGCAG CCTGCGAGGAGGGGAAAAAGTGA
Upstream 100 bases:
>100_bases GCATTAAAGGCGAAGGTATTTAAAATCCCCTTGACTCGGTAAATTTACAGGTATAGATTAATTTTTAGATAGGAATAATT ACGATGTAGGTGGGAATACG
Downstream 100 bases:
>100_bases AGCGAGTACTTGCGCTGGTTTTAGTTTTTACTTTATTTGTACTTTCGGGCTGTTCCAATGCCCGGACGGCTTCTACAACC GATAGCGGTAAGCCTTTGAT
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNVREAYKILRDKGIKITPQRQALLELFADEKSYTAREIAEKLRRHYPGFSFDTVYRNLKLYCRCGILTETMAPDGIARF SLNTGQHRHYFTCLACGEKVALESCPIEENKFNLPGKVGTITYHRIELFGKCAACEEGKK
Sequences:
>Translated_140_residues MNVREAYKILRDKGIKITPQRQALLELFADEKSYTAREIAEKLRRHYPGFSFDTVYRNLKLYCRCGILTETMAPDGIARF SLNTGQHRHYFTCLACGEKVALESCPIEENKFNLPGKVGTITYHRIELFGKCAACEEGKK >Mature_140_residues MNVREAYKILRDKGIKITPQRQALLELFADEKSYTAREIAEKLRRHYPGFSFDTVYRNLKLYCRCGILTETMAPDGIARF SLNTGQHRHYFTCLACGEKVALESCPIEENKFNLPGKVGTITYHRIELFGKCAACEEGKK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16056; Mature: 16056
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVREAYKILRDKGIKITPQRQALLELFADEKSYTAREIAEKLRRHYPGFSFDTVYRNLK CCHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH LYCRCGILTETMAPDGIARFSLNTGQHRHYFTCLACGEKVALESCPIEENKFNLPGKVGT HEEECCCHHCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEE ITYHRIELFGKCAACEEGKK EEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNVREAYKILRDKGIKITPQRQALLELFADEKSYTAREIAEKLRRHYPGFSFDTVYRNLK CCHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH LYCRCGILTETMAPDGIARFSLNTGQHRHYFTCLACGEKVALESCPIEENKFNLPGKVGT HEEECCCHHCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEE ITYHRIELFGKCAACEEGKK EEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8764488 [H]