| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is adcA [H]
Identifier: 78043378
GI number: 78043378
Start: 564730
End: 565611
Strand: Direct
Name: adcA [H]
Synonym: CHY_0652
Alternate gene names: 78043378
Gene position: 564730-565611 (Clockwise)
Preceding gene: 78042705
Following gene: 78045197
Centisome position: 23.52
GC content: 42.29
Gene sequence:
>882_bases GTGAAGCGAGTACTTGCGCTGGTTTTAGTTTTTACTTTATTTGTACTTTCGGGCTGTTCCAATGCCCGGACGGCTTCTAC AACCGATAGCGGTAAGCCTTTGATTGTTACTTCAATTTATCCCTATGGTGAGCTTGCCCGGGAGATTGCCGGGGATAAAG CTGAGGTTACGGTTTTAGCCCCTCCTGGAGCCGATGCCCATGATTTTGAACCAAAACCTTCCGACCTTTTTACCCTGAGG AAGGCCGATTTAATCATCTTAAATGGTGGGGGCTTAGAGCCCTGGGCCGGAAAGATAATCAAGCTTTTAGGAAAAGATAA GGTTATTGAAGCGGAAAAAATTTTGGAAGGCAAAGTAAAAAAAGACGATCCCCATTACTGGCTATCTTTGATATTTGCCC GCAAAATAGCCGAAGCTATTAAGGATAATTTAGTAACGCTGGATCCGGGAAATAAAAGCTACTATGAGGAAAATTACCGC AAACTTGCCGATAAACTTTATGAGCTGCATTTGGCGATGGTGGATCTTACCTCGGACCTAAAAACCCGCAAGATTTTTAC CCTGCACCGGGCCTTTGGTTATTTTGCAGCCGATTACGGTTTACAGGAAATTTCCCTGATGTCCGGAAAGGAAGCGGAAG CAACCGTTGGCGATATTGAAAAGTTTATGAAAGAATTTTCGGCGGAAGGTTGTGAATACGTATTTTTTGACCCGGTTTTT GGTAAAAAGGTTGCGGAAAAAGTTTCTGAAAACTACAGGGTGAAGTTTATGCCCCTTTATACTTTAGAAGGAGTTGATGA AACCCTAAAAGGTAAAAGCTATTTAGAATTAATGCAGGAGAATATTGAAACTTTGCGCCTTGTTTTAGGAGGAGATGATT AA
Upstream 100 bases:
>100_bases TTGAAGAAAATAAATTTAACCTTCCGGGAAAAGTGGGGACGATAACGTATCACCGGATTGAACTTTTTGGAAAGTGTGCA GCCTGCGAGGAGGGGAAAAA
Downstream 100 bases:
>100_bases ATTTGGGGCTAGAAGTTAAAAACCTCTCTGTAAATTACGGCGGTGAGCCGGTATTAGAGGATATAAATTTTTCATTAAAG GAAGGGGATTTTCTTTTGGT
Product: ABC transporter substrate-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKRVLALVLVFTLFVLSGCSNARTASTTDSGKPLIVTSIYPYGELAREIAGDKAEVTVLAPPGADAHDFEPKPSDLFTLR KADLIILNGGGLEPWAGKIIKLLGKDKVIEAEKILEGKVKKDDPHYWLSLIFARKIAEAIKDNLVTLDPGNKSYYEENYR KLADKLYELHLAMVDLTSDLKTRKIFTLHRAFGYFAADYGLQEISLMSGKEAEATVGDIEKFMKEFSAEGCEYVFFDPVF GKKVAEKVSENYRVKFMPLYTLEGVDETLKGKSYLELMQENIETLRLVLGGDD
Sequences:
>Translated_293_residues MKRVLALVLVFTLFVLSGCSNARTASTTDSGKPLIVTSIYPYGELAREIAGDKAEVTVLAPPGADAHDFEPKPSDLFTLR KADLIILNGGGLEPWAGKIIKLLGKDKVIEAEKILEGKVKKDDPHYWLSLIFARKIAEAIKDNLVTLDPGNKSYYEENYR KLADKLYELHLAMVDLTSDLKTRKIFTLHRAFGYFAADYGLQEISLMSGKEAEATVGDIEKFMKEFSAEGCEYVFFDPVF GKKVAEKVSENYRVKFMPLYTLEGVDETLKGKSYLELMQENIETLRLVLGGDD >Mature_293_residues MKRVLALVLVFTLFVLSGCSNARTASTTDSGKPLIVTSIYPYGELAREIAGDKAEVTVLAPPGADAHDFEPKPSDLFTLR KADLIILNGGGLEPWAGKIIKLLGKDKVIEAEKILEGKVKKDDPHYWLSLIFARKIAEAIKDNLVTLDPGNKSYYEENYR KLADKLYELHLAMVDLTSDLKTRKIFTLHRAFGYFAADYGLQEISLMSGKEAEATVGDIEKFMKEFSAEGCEYVFFDPVF GKKVAEKVSENYRVKFMPLYTLEGVDETLKGKSYLELMQENIETLRLVLGGDD
Specific function: Part of the high-affinity ABC transporter complex AdcABC involved in zinc import (Probable) [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=291, Percent_Identity=27.1477663230241, Blast_Score=91, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 32753; Mature: 32753
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLALVLVFTLFVLSGCSNARTASTTDSGKPLIVTSIYPYGELAREIAGDKAEVTVLA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEE PPGADAHDFEPKPSDLFTLRKADLIILNGGGLEPWAGKIIKLLGKDKVIEAEKILEGKVK CCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCC KDDPHYWLSLIFARKIAEAIKDNLVTLDPGNKSYYEENYRKLADKLYELHLAMVDLTSDL CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH KTRKIFTLHRAFGYFAADYGLQEISLMSGKEAEATVGDIEKFMKEFSAEGCEYVFFDPVF HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHH GKKVAEKVSENYRVKFMPLYTLEGVDETLKGKSYLELMQENIETLRLVLGGDD HHHHHHHHCCCCEEEEEEEEEECCCCHHHCCHHHHHHHHHHHHHEEEEECCCC >Mature Secondary Structure MKRVLALVLVFTLFVLSGCSNARTASTTDSGKPLIVTSIYPYGELAREIAGDKAEVTVLA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEE PPGADAHDFEPKPSDLFTLRKADLIILNGGGLEPWAGKIIKLLGKDKVIEAEKILEGKVK CCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCC KDDPHYWLSLIFARKIAEAIKDNLVTLDPGNKSYYEENYRKLADKLYELHLAMVDLTSDL CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH KTRKIFTLHRAFGYFAADYGLQEISLMSGKEAEATVGDIEKFMKEFSAEGCEYVFFDPVF HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHH GKKVAEKVSENYRVKFMPLYTLEGVDETLKGKSYLELMQENIETLRLVLGGDD HHHHHHHHCCCCEEEEEEEEEECCCCHHHCCHHHHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9811636 [H]