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The map label for this gene is rbsC [H]

Identifier: 77465741

GI number: 77465741

Start: 861314

End: 862324

Strand: Direct

Name: rbsC [H]

Synonym: RSP_3735

Alternate gene names: 77465741

Gene position: 861314-862324 (Clockwise)

Preceding gene: 77465740

Following gene: 77465742

Centisome position: 91.34

GC content: 68.84

Gene sequence:

>1011_bases
ATGGCCTCGAACACCGAAACCCGCCCCCTGCTGAGCCGCCTTCTCGGGCGCGATGCGGCGGTGGCGCAGCTCATCGTCAT
CACGCTGCTGATCTTCGTCGCGATGACCGCGCTGAACCCCGACAAGTTCCTGCGCTACTACAATTTCGAGTCGCTCACCT
ATATCGCGCCCGAGCTGGGCATCCTCTCGGTCGCCATGATGATCGCGATGCTGACCGGGGGGATCGACCTCTCGATCGTG
GGGGTGGCGAACCTCGCGGCCATCGTGGCGGGGGTCTATTTCCGCATCCCGGCCGTGAGCGAAGCCACAGCCGCGGGCGG
CGCGGGGCTCGTCCTCCATACGGCGGCGGCGGTCCTGATCGCGCTCGTGGTGGGGCTGGCCGCGGGCGGGCTGAACGGCG
TGCTGATCGCACGGCTCCGCATCATCCCGATCCTTGCCACGCTCGGCACCGGGCAGATCTTCGCGGGCCTCGCGCTCGTG
CTGACCGGCGGCCCCGCCATCACGGGCTTTCCCGAGACCTGGGCCTGGATCGGGGCGGGCAAGATCCTCGGGCTCGCCAC
GCCGCTCTGGGTGCTGATCGTGGTCGCGGGGCTGGTGGCGCTGCTGCTCGCCCGCACCACGCTCGGCGTGAACCTGATGC
TCATGGGCACCAACCCGCGCGCCGCGATCTTCGCGGGCATCCGCTCGGGCCGGATGATCCTCTACAGCTACATGCTGACG
GGGATGCTCGCGGCCGTGGCGGGCGTGCTGCTCTCGGGGCGGACCAACTCGGCCAAGGCGGATTTCGGCGCCTCCTACCT
GCTGCAGGCGGTGCTGATCGCGGTGCTGGGCGGCACCAATCCCGCCGGCGGCAAGGGCCGGGTGCTGGGCGTGCTGCTCG
CGCTCGTGGCGCTGATGCTGCTCTCGTCGGGTCTCCAGATCATGCGGGTATCGAACTTCCTGATCGATGCCGTCTGGGGC
GCCTTCCTCGTCATCGTCATCGCCATCAACTACCTGAGGTCGCGGAAATGA

Upstream 100 bases:

>100_bases
CACGACCTGGCAGCGGGTGGTCGTGGGCCTCATCATCGTCGCCGCGACCGCCATCACCGCCTGGCGCGACCGCAAGAAGC
TGGCCTGAGGGGGGAACGCC

Downstream 100 bases:

>100_bases
CCGAGATCCATATACCCCTGCCCCGCGACGCCTTCCCCGACCGGGGCGAGCGGCCCATCGCCAGCGGCGCGGGCTTCACC
GCCACGGCCTTCCGCTATCC

Product: ABC sugar transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MASNTETRPLLSRLLGRDAAVAQLIVITLLIFVAMTALNPDKFLRYYNFESLTYIAPELGILSVAMMIAMLTGGIDLSIV
GVANLAAIVAGVYFRIPAVSEATAAGGAGLVLHTAAAVLIALVVGLAAGGLNGVLIARLRIIPILATLGTGQIFAGLALV
LTGGPAITGFPETWAWIGAGKILGLATPLWVLIVVAGLVALLLARTTLGVNLMLMGTNPRAAIFAGIRSGRMILYSYMLT
GMLAAVAGVLLSGRTNSAKADFGASYLLQAVLIAVLGGTNPAGGKGRVLGVLLALVALMLLSSGLQIMRVSNFLIDAVWG
AFLVIVIAINYLRSRK

Sequences:

>Translated_336_residues
MASNTETRPLLSRLLGRDAAVAQLIVITLLIFVAMTALNPDKFLRYYNFESLTYIAPELGILSVAMMIAMLTGGIDLSIV
GVANLAAIVAGVYFRIPAVSEATAAGGAGLVLHTAAAVLIALVVGLAAGGLNGVLIARLRIIPILATLGTGQIFAGLALV
LTGGPAITGFPETWAWIGAGKILGLATPLWVLIVVAGLVALLLARTTLGVNLMLMGTNPRAAIFAGIRSGRMILYSYMLT
GMLAAVAGVLLSGRTNSAKADFGASYLLQAVLIAVLGGTNPAGGKGRVLGVLLALVALMLLSSGLQIMRVSNFLIDAVWG
AFLVIVIAINYLRSRK
>Mature_335_residues
ASNTETRPLLSRLLGRDAAVAQLIVITLLIFVAMTALNPDKFLRYYNFESLTYIAPELGILSVAMMIAMLTGGIDLSIVG
VANLAAIVAGVYFRIPAVSEATAAGGAGLVLHTAAAVLIALVVGLAAGGLNGVLIARLRIIPILATLGTGQIFAGLALVL
TGGPAITGFPETWAWIGAGKILGLATPLWVLIVVAGLVALLLARTTLGVNLMLMGTNPRAAIFAGIRSGRMILYSYMLTG
MLAAVAGVLLSGRTNSAKADFGASYLLQAVLIAVLGGTNPAGGKGRVLGVLLALVALMLLSSGLQIMRVSNFLIDAVWGA
FLVIVIAINYLRSRK

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787794, Length=319, Percent_Identity=32.9153605015674, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1790191, Length=305, Percent_Identity=31.8032786885246, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790524, Length=331, Percent_Identity=26.8882175226586, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693152, Length=328, Percent_Identity=26.5243902439024, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1788896, Length=318, Percent_Identity=27.6729559748428, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787793, Length=289, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI145693214, Length=241, Percent_Identity=32.7800829875519, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788471, Length=209, Percent_Identity=29.6650717703349, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34632; Mature: 34501

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNTETRPLLSRLLGRDAAVAQLIVITLLIFVAMTALNPDKFLRYYNFESLTYIAPELG
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCHHH
ILSVAMMIAMLTGGIDLSIVGVANLAAIVAGVYFRIPAVSEATAAGGAGLVLHTAAAVLI
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHH
ALVVGLAAGGLNGVLIARLRIIPILATLGTGQIFAGLALVLTGGPAITGFPETWAWIGAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCHHHHHHCCC
KILGLATPLWVLIVVAGLVALLLARTTLGVNLMLMGTNPRAAIFAGIRSGRMILYSYMLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH
GMLAAVAGVLLSGRTNSAKADFGASYLLQAVLIAVLGGTNPAGGKGRVLGVLLALVALML
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LSSGLQIMRVSNFLIDAVWGAFLVIVIAINYLRSRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASNTETRPLLSRLLGRDAAVAQLIVITLLIFVAMTALNPDKFLRYYNFESLTYIAPELG
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCHHH
ILSVAMMIAMLTGGIDLSIVGVANLAAIVAGVYFRIPAVSEATAAGGAGLVLHTAAAVLI
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHH
ALVVGLAAGGLNGVLIARLRIIPILATLGTGQIFAGLALVLTGGPAITGFPETWAWIGAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCHHHHHHCCC
KILGLATPLWVLIVVAGLVALLLARTTLGVNLMLMGTNPRAAIFAGIRSGRMILYSYMLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH
GMLAAVAGVLLSGRTNSAKADFGASYLLQAVLIAVLGGTNPAGGKGRVLGVLLALVALML
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LSSGLQIMRVSNFLIDAVWGAFLVIVIAINYLRSRK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]