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The map label for this gene is yubM [H]

Identifier: 77465611

GI number: 77465611

Start: 706548

End: 708368

Strand: Reverse

Name: yubM [H]

Synonym: RSP_3609

Alternate gene names: 77465611

Gene position: 708368-706548 (Counterclockwise)

Preceding gene: 77465612

Following gene: 77465610

Centisome position: 75.12

GC content: 72.49

Gene sequence:

>1821_bases
ATGGCTAAGGACTTCATCTCCCGAGGCGATCTGCGCCTCATCCCGCTCGCCGAGCTCCGGCTCTCGCCGCTCAACAGCCG
TCAGGAGATCGCGGCCGAGGAGGTCGAGGCCATGGCCGAGAGCCTCGCCGTGGCGGGGCTGCTGCAGAACCTGATCGGCC
ATCTGACACCCACGGGCGTCGAGATCGTCGGCGGCGGCACCCGGCTCCGCGCGCTGCAGCGCCTCGCGGCCGAGGGCTGG
AGCCGGCATGAGGATCTCATTCCGATAGATCCGGTGCCGGTGAAGGTGACGGCCGACCTGCAGGAAGCGGTGGCCTGGGC
CGGCACCGAGAACAGCGCGCGCTCGGCGCTGCACCCGGCCGACGAGGTCCGCGCCTATGCCGCGATGCGCGAGCGGGGCG
CGAGCCTGTCGCGGATCGCGCGCAGCTTTGCCCGCTCCGAGGCTCATGTCGAGCGGCGGCTGAAGCTCGCGGACCTGCCG
GCCGAGGCTCTGGCGGCGCTCCGCGCGAACGAGATCTCGCTCGAGATGGCGAAGGCGCTGACGCTGGCGCCGAGCGGCGA
GCGCTGCCTTGAGGTGCTGGGATCGGTGCGGGGGCGCGACGTGCGGCCCGAGCAGGTGCGGCGCGAGCTCACACCCGGCA
CCGTGCCCTCGACCGACCGGCGGGCGGTCTTCGTGGGGCTCGAGGCTTATCTCGCCGCCGGTGGAACCTCTCAGCGCGAT
CTCTTCGCCGACCGGACGCTGCTGGAGGACGAGGCGCTCCTCGACCGGCTCTTCGCCGAGAAGGGCGCGGCCGAGGCCGA
GCGGATCCGCGCGGAAGAGGGCTGGGAATGGGCGACATGGGTGCCGGAGGAATATGTCTCCTGGACCGTCACGCAGAAGC
TGGTGCGTCTCTACGCCCGGCCGGGGAAGCTCTCGGACGGAGAGGAAGCGGAGCTCGCGGCGCTCGAGGAGCGCGAGGCC
GACGACACCCTCGACGAGCCCGGCCGCGCGCGGCTGGCCGAGCTCGAGGCCCGGCGCGAGGGGGGCTTCACCGACGCGCA
GCGCGCCTCGGCCGGGATCTTCGTCTATTGCAGCAGCCGGGACGGGCTCTCGGTCGAGCGGGCCTATCAGCAGCCGCGGG
CGGTTCCGCGCGGCGCGGCCGAGCTGGCACCCGACCTGCCGCAGTCGCTGATCGAGGACCTGCATCGGATCCGGCTCGGG
GCGCTGCAGGCGCGGCTGATGGACCAGTCCGAGCTCATGCTCGACCTTCTCGCCTGGTCCCTCGGCGGCGGCCTCAGGCC
CTGGGCGCGCCCGCTCGCGATCTCACCCACCGACCAGCCCATCGTGCCGGAGAAGGGCGAAGGCACCAGCTACCCGCCGC
GGCTGGCGGCACGGCTCGAGCCGAATGCGAGCCTCGGCCCCGACGGCACCCCGGCCGAGTTCGAGGCCTTCCGGGCGCAG
GGGAAGAAACACCGCAACCAGATCCTGACCGAGGCCCTCGCGCGGACTTTCTGCACCGGCAGCTCCGGCCTCTCGGCCGC
GCTCGCGCGCCAGCTCGGGGTCGAGGTGCGCCGGATCTGGACGCCCACCGCCCAGGGATTTCTCGGCCGCTGCAGCGCGG
GCTATCTCGACCGGCTCTGGAATGAGCTCGTGCCGGCGGCCGAGGCGGAGCCAGCTCATCAGAGCTTCAACAAGCTGAAG
AAGGGGGAGAAGGCGAAGCGCCTCGAGGCGCTCTTCGCCGATCCCGACACCCGCGAGGCCCTTGGCCTCAGCCGCGAGGA
CTGCGCGAAGATCGACGCGTGGGTGCCGGCCGAGCTCGGCTGGCCGGAGGGCGAGGAATGA

Upstream 100 bases:

>100_bases
TCCGCGCAGCTTCCGTTCACTCCGCCCGGCGCCTCGCGCGCGCAGGGCCCTGTCCCGCGCTCCGGCGCGCCGGAGAAGAA
TTGCATGAAGGGCATCCCGC

Downstream 100 bases:

>100_bases
GCGGTCCAGACAAGGCCGCAGCCATGCGGCGGGCGAGGGCGGGCCGATGAGCGCCCCGTTTCGCCACGAGGATCCGGTGC
TCGATTTCGTGCGCACCTTG

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MAKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQNLIGHLTPTGVEIVGGGTRLRALQRLAAEGW
SRHEDLIPIDPVPVKVTADLQEAVAWAGTENSARSALHPADEVRAYAAMRERGASLSRIARSFARSEAHVERRLKLADLP
AEALAALRANEISLEMAKALTLAPSGERCLEVLGSVRGRDVRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRD
LFADRTLLEDEALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYARPGKLSDGEEAELAALEEREA
DDTLDEPGRARLAELEARREGGFTDAQRASAGIFVYCSSRDGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLG
ALQARLMDQSELMLDLLAWSLGGGLRPWARPLAISPTDQPIVPEKGEGTSYPPRLAARLEPNASLGPDGTPAEFEAFRAQ
GKKHRNQILTEALARTFCTGSSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLWNELVPAAEAEPAHQSFNKLK
KGEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELGWPEGEE

Sequences:

>Translated_606_residues
MAKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQNLIGHLTPTGVEIVGGGTRLRALQRLAAEGW
SRHEDLIPIDPVPVKVTADLQEAVAWAGTENSARSALHPADEVRAYAAMRERGASLSRIARSFARSEAHVERRLKLADLP
AEALAALRANEISLEMAKALTLAPSGERCLEVLGSVRGRDVRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRD
LFADRTLLEDEALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYARPGKLSDGEEAELAALEEREA
DDTLDEPGRARLAELEARREGGFTDAQRASAGIFVYCSSRDGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLG
ALQARLMDQSELMLDLLAWSLGGGLRPWARPLAISPTDQPIVPEKGEGTSYPPRLAARLEPNASLGPDGTPAEFEAFRAQ
GKKHRNQILTEALARTFCTGSSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLWNELVPAAEAEPAHQSFNKLK
KGEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELGWPEGEE
>Mature_605_residues
AKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQNLIGHLTPTGVEIVGGGTRLRALQRLAAEGWS
RHEDLIPIDPVPVKVTADLQEAVAWAGTENSARSALHPADEVRAYAAMRERGASLSRIARSFARSEAHVERRLKLADLPA
EALAALRANEISLEMAKALTLAPSGERCLEVLGSVRGRDVRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRDL
FADRTLLEDEALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYARPGKLSDGEEAELAALEEREAD
DTLDEPGRARLAELEARREGGFTDAQRASAGIFVYCSSRDGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLGA
LQARLMDQSELMLDLLAWSLGGGLRPWARPLAISPTDQPIVPEKGEGTSYPPRLAARLEPNASLGPDGTPAEFEAFRAQG
KKHRNQILTEALARTFCTGSSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLWNELVPAAEAEPAHQSFNKLKK
GEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELGWPEGEE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 66224; Mature: 66092

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQNLIGHLTPTGV
CCCCHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
EIVGGGTRLRALQRLAAEGWSRHEDLIPIDPVPVKVTADLQEAVAWAGTENSARSALHPA
EEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCH
DEVRAYAAMRERGASLSRIARSFARSEAHVERRLKLADLPAEALAALRANEISLEMAKAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TLAPSGERCLEVLGSVRGRDVRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRD
HCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHH
LFADRTLLEDEALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYAR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHC
PGKLSDGEEAELAALEEREADDTLDEPGRARLAELEARREGGFTDAQRASAGIFVYCSSR
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCC
DGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLGALQARLMDQSELMLDLLAWS
CCCCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGLRPWARPLAISPTDQPIVPEKGEGTSYPPRLAARLEPNASLGPDGTPAEFEAFRAQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHH
GKKHRNQILTEALARTFCTGSSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCHHHHHHCCCHHHHHHHH
NELVPAAEAEPAHQSFNKLKKGEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELG
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCCCCCC
WPEGEE
CCCCCC
>Mature Secondary Structure 
AKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQNLIGHLTPTGV
CCCHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
EIVGGGTRLRALQRLAAEGWSRHEDLIPIDPVPVKVTADLQEAVAWAGTENSARSALHPA
EEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCH
DEVRAYAAMRERGASLSRIARSFARSEAHVERRLKLADLPAEALAALRANEISLEMAKAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TLAPSGERCLEVLGSVRGRDVRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRD
HCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHH
LFADRTLLEDEALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYAR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHC
PGKLSDGEEAELAALEEREADDTLDEPGRARLAELEARREGGFTDAQRASAGIFVYCSSR
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCC
DGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLGALQARLMDQSELMLDLLAWS
CCCCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGLRPWARPLAISPTDQPIVPEKGEGTSYPPRLAARLEPNASLGPDGTPAEFEAFRAQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHH
GKKHRNQILTEALARTFCTGSSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCHHHHHHCCCHHHHHHHH
NELVPAAEAEPAHQSFNKLKKGEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELG
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCCCCCCC
WPEGEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]