| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465610
Identifier: 77465610
GI number: 77465610
Start: 704775
End: 706394
Strand: Reverse
Name: 77465610
Synonym: RSP_3608
Alternate gene names: NA
Gene position: 706394-704775 (Counterclockwise)
Preceding gene: 77465611
Following gene: 77465602
Centisome position: 74.91
GC content: 69.38
Gene sequence:
>1620_bases ATGCACGGCAGGCGCGCCGCAATCTACGCCCGCTACTCGACGGAGCTCCAGGACGGACGATCGATTGACGATCAGGTGGC GCTCTGCCGCGAGCATGCCGCGCGGAGCGGGCTGACCGTCGTCGCGACCTATGACGACCGTGCGAAGACCTCGGCGAGCA TCTTCGGTCGCGACGGGCTCGCGCGCATGATGGAGCAGGCGCGGGCCCGCCAGTTCGACGTCGTGATCGTGGAGGCGCTC GACCGGCTGAGCCGCGATCAGGAGGATCTGGCGCACATCCACAAGCGGCTGAGCTTCGCCCGGATCGACATCCTGACAGT GCATGAGGGCGTGGCGGATTCGGTGTCGGTGGGCCTGCGGGGGCTCATGGGGACGATGTTCCTCGAGGCGCTGAAAGCCA AGACGCGCCGGGGTCTCGCCGGCGTGATCCGCGACGGTCGCCACGCCGGCGGGCAGACCTACGGCTATCGCGGCGTCCCG GGCGAGCCGGGAAAGCGCGAGATCGTGGCGCACGAGGCCGAGATCATCCGGGAGATCTTCGCGGCCTATGTGGAGGGGAA GAGCCCGCGGACCATTGCGGGCGAGCTGAACGCGCGGGGGATCGCCGCCCCGCGCGGGCCGAAGTGGAATGCCTCGACGC TGAACGGCAACCCGCAGCGTGGCTACGGCATCCTGCGCAACCCGATGTATGACGGCCGTTTGGTCTGGAACCGCGTCACC ATGGTGCGGGATCCGGACACCGGGCGGCGCGTGAACCGCGAGAATCCGCTGGATGCCCGGCAGGAGGTCGAGGCCGAGCA TCTGCGCATCGTGCCCCGGCCGCTCTTCGAGGCCGCTGTCCGGCGCCACGCGCAGCAGGCGGAGGCGGTGCGGACGGGCA AGATCACCAAGGCACCGCCCCGGCCTTTCTCAGGCCTGATCCGCTGCGCCTGCTGCGGAGGCGGCATGAGCATCCACGAC CGTTGCGGCGAGGCCATCCGGATCCGGTGCAGCACGGCGAACGAGAGCGGAAGCTGCGAGAACAAGGCGCGCTATCGGCT CGAGAAGATCGAGGAGGCGATCTTCCTTCGCCTTCGGGCGCAACTCGACCGCCCGGACTATCTGAAGGAGTTCGTCCGGG TGTATGCCGAGGAGCGCCGGCGCCTGACGGAGACGGCGCGCCGCGACCGGGCACGGCTGGAACGGGCCGCGGCGGACAGC CGGGCCCGCTACATGCGGCTGGTGGACATGATGGCGCGCGGACTGATCGAGGGCGAGGAAGCCGACGCCCAGGTGCTGCA GGCCAAGCAGGCCGCAGAGATCGCGCGGAGCGAGCTCGAGATCGCATCGAGCGAGGATAATGTGGTGGAGCTGCACCCGC AGGCGACGGCCGCCTATACCCGCGCCATCGCCGATCTTTCGGCCGCGCTGCAGCGGGGCGACGGCACGTTCGACGCGACC TCGGTCGAGGCCCTGCGCCGGATCATCACCGAGATCACCGTCCATCCCAAGGATGAGGCCGGCGACGTCCTGGTCGAGGT CCGTGGCAACATGGAGCGGCTGCTCGGGATCGGCCAACAGATTGTGGGGGGTCCGATGGTGGCGAGGGGGGGACTTGAAC CCCCGACCCCACGATTATGA
Upstream 100 bases:
>100_bases CCCCGTTTCGCCACGAGGATCCGGTGCTCGATTTCGTGCGCACCTTGGCCCGCAGCTACGCCGCGCGGCATCATGCAGAG GGACAGGAGAGAGAATCAGG
Downstream 100 bases:
>100_bases GTCGTGTGCTCTAACCAGCTGAGCTACCTCGCCGTCGGTGGACGCTGCACTATGGGATGTGCCGGGAAGCGTCAAGCGCA AAAACCGGGTCGCGGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Resolvase Domain Protein; Resolvase Domain-Containing Protein; Site-Specific Recombinase; Resolvase Domain; DNA Recombinase; Site-Specific DNA Recombinase; Resolvase; Cassette Chromosome Recombinase B; DNA Integration/Recombination Protein; Resolvase Family Site-Specific Recombinase; Site-Specific Recombinase Resolvase Family; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinases; Resolvase N Terminal Domain Family; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Resolvase Family Protein; Resolvase N-TerminalRecombinase; Transposase; Recombinase Family; TnpX Site-Specific Recombinase; Recombinase Family Protein; Site-Specific Recombinases DNA Invertase Pin-Like Protein; Conjugative Transposon Recombinase; Resolvase Domain Protein PinR Type; Integrase; LOW QUALITY PROTEIN Resolvase Domain Protein; Cassette Chromosome Recombinase C; DNA Integration/Recombination/Invertion Protein; Site-Specific RecombinaIVCA; Site-Specific Recombinase/Resolvase; Site-Specific Recombinase And Resolvase Superfamily Protein
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MHGRRAAIYARYSTELQDGRSIDDQVALCREHAARSGLTVVATYDDRAKTSASIFGRDGLARMMEQARARQFDVVIVEAL DRLSRDQEDLAHIHKRLSFARIDILTVHEGVADSVSVGLRGLMGTMFLEALKAKTRRGLAGVIRDGRHAGGQTYGYRGVP GEPGKREIVAHEAEIIREIFAAYVEGKSPRTIAGELNARGIAAPRGPKWNASTLNGNPQRGYGILRNPMYDGRLVWNRVT MVRDPDTGRRVNRENPLDARQEVEAEHLRIVPRPLFEAAVRRHAQQAEAVRTGKITKAPPRPFSGLIRCACCGGGMSIHD RCGEAIRIRCSTANESGSCENKARYRLEKIEEAIFLRLRAQLDRPDYLKEFVRVYAEERRRLTETARRDRARLERAAADS RARYMRLVDMMARGLIEGEEADAQVLQAKQAAEIARSELEIASSEDNVVELHPQATAAYTRAIADLSAALQRGDGTFDAT SVEALRRIITEITVHPKDEAGDVLVEVRGNMERLLGIGQQIVGGPMVARGGLEPPTPRL
Sequences:
>Translated_539_residues MHGRRAAIYARYSTELQDGRSIDDQVALCREHAARSGLTVVATYDDRAKTSASIFGRDGLARMMEQARARQFDVVIVEAL DRLSRDQEDLAHIHKRLSFARIDILTVHEGVADSVSVGLRGLMGTMFLEALKAKTRRGLAGVIRDGRHAGGQTYGYRGVP GEPGKREIVAHEAEIIREIFAAYVEGKSPRTIAGELNARGIAAPRGPKWNASTLNGNPQRGYGILRNPMYDGRLVWNRVT MVRDPDTGRRVNRENPLDARQEVEAEHLRIVPRPLFEAAVRRHAQQAEAVRTGKITKAPPRPFSGLIRCACCGGGMSIHD RCGEAIRIRCSTANESGSCENKARYRLEKIEEAIFLRLRAQLDRPDYLKEFVRVYAEERRRLTETARRDRARLERAAADS RARYMRLVDMMARGLIEGEEADAQVLQAKQAAEIARSELEIASSEDNVVELHPQATAAYTRAIADLSAALQRGDGTFDAT SVEALRRIITEITVHPKDEAGDVLVEVRGNMERLLGIGQQIVGGPMVARGGLEPPTPRL >Mature_539_residues MHGRRAAIYARYSTELQDGRSIDDQVALCREHAARSGLTVVATYDDRAKTSASIFGRDGLARMMEQARARQFDVVIVEAL DRLSRDQEDLAHIHKRLSFARIDILTVHEGVADSVSVGLRGLMGTMFLEALKAKTRRGLAGVIRDGRHAGGQTYGYRGVP GEPGKREIVAHEAEIIREIFAAYVEGKSPRTIAGELNARGIAAPRGPKWNASTLNGNPQRGYGILRNPMYDGRLVWNRVT MVRDPDTGRRVNRENPLDARQEVEAEHLRIVPRPLFEAAVRRHAQQAEAVRTGKITKAPPRPFSGLIRCACCGGGMSIHD RCGEAIRIRCSTANESGSCENKARYRLEKIEEAIFLRLRAQLDRPDYLKEFVRVYAEERRRLTETARRDRARLERAAADS RARYMRLVDMMARGLIEGEEADAQVLQAKQAAEIARSELEIASSEDNVVELHPQATAAYTRAIADLSAALQRGDGTFDAT SVEALRRIITEITVHPKDEAGDVLVEVRGNMERLLGIGQQIVGGPMVARGGLEPPTPRL
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59790; Mature: 59790
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGRRAAIYARYSTELQDGRSIDDQVALCREHAARSGLTVVATYDDRAKTSASIFGRDGL CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHH ARMMEQARARQFDVVIVEALDRLSRDQEDLAHIHKRLSFARIDILTVHEGVADSVSVGLR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH GLMGTMFLEALKAKTRRGLAGVIRDGRHAGGQTYGYRGVPGEPGKREIVAHEAEIIREIF HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AAYVEGKSPRTIAGELNARGIAAPRGPKWNASTLNGNPQRGYGILRNPMYDGRLVWNRVT HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEE MVRDPDTGRRVNRENPLDARQEVEAEHLRIVPRPLFEAAVRRHAQQAEAVRTGKITKAPP EEECCCCCCCCCCCCCCCHHHHHCHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPFSGLIRCACCGGGMSIHDRCGEAIRIRCSTANESGSCENKARYRLEKIEEAIFLRLRA CCHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH QLDRPDYLKEFVRVYAEERRRLTETARRDRARLERAAADSRARYMRLVDMMARGLIEGEE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADAQVLQAKQAAEIARSELEIASSEDNVVELHPQATAAYTRAIADLSAALQRGDGTFDAT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHH SVEALRRIITEITVHPKDEAGDVLVEVRGNMERLLGIGQQIVGGPMVARGGLEPPTPRL HHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECCCCCCCCCCC >Mature Secondary Structure MHGRRAAIYARYSTELQDGRSIDDQVALCREHAARSGLTVVATYDDRAKTSASIFGRDGL CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHH ARMMEQARARQFDVVIVEALDRLSRDQEDLAHIHKRLSFARIDILTVHEGVADSVSVGLR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH GLMGTMFLEALKAKTRRGLAGVIRDGRHAGGQTYGYRGVPGEPGKREIVAHEAEIIREIF HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AAYVEGKSPRTIAGELNARGIAAPRGPKWNASTLNGNPQRGYGILRNPMYDGRLVWNRVT HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEE MVRDPDTGRRVNRENPLDARQEVEAEHLRIVPRPLFEAAVRRHAQQAEAVRTGKITKAPP EEECCCCCCCCCCCCCCCHHHHHCHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPFSGLIRCACCGGGMSIHDRCGEAIRIRCSTANESGSCENKARYRLEKIEEAIFLRLRA CCHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH QLDRPDYLKEFVRVYAEERRRLTETARRDRARLERAAADSRARYMRLVDMMARGLIEGEE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADAQVLQAKQAAEIARSELEIASSEDNVVELHPQATAAYTRAIADLSAALQRGDGTFDAT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHH SVEALRRIITEITVHPKDEAGDVLVEVRGNMERLLGIGQQIVGGPMVARGGLEPPTPRL HHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA