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The map label for this gene is dap [H]

Identifier: 77465254

GI number: 77465254

Start: 303343

End: 304893

Strand: Direct

Name: dap [H]

Synonym: RSP_3246

Alternate gene names: 77465254

Gene position: 303343-304893 (Clockwise)

Preceding gene: 77465253

Following gene: 77465266

Centisome position: 32.17

GC content: 71.76

Gene sequence:

>1551_bases
ATGACACTCGATCTCGACGCGCTCGACCGCGCCCTCGATGCGCTGCCGAACCTCTTCCGCGGACCCGGCGGCGTGGCCGG
GGTGGTCAAGGACGGGCAGGTGGTGGCCAGCCGCGCCTGGGGCTACGCGGACCTGACCCGCCGCCGCCCGATGGAGACAG
GCACGCGCCTGCCGATCTGCTCGATCTCGAAGCAGTTCACCTGCGGCGCGCTGCTCGACACGCTGGGCGACACCGCCGCT
TACGATGCGCGGGTGGCCGAGTTCCTGCCGCAGTTCGAGGGGCCGCTGCCGACGCTCCGCCAGCTCTGCGACAACCAGTC
GGGCCTGCGCGACTACTGGGCGCTGACCGTACTGCAGGGGGCCGAGGCCGCCCAGACCTTCCGGCGCGAGGATGCGCTGC
CGCTGATCGCGCGGATGAAGACCGGGCATTTCCCGCCCGGCACCGCCTATTCCTACTGCAACTGCAACTTCCGCATCGTT
TCGGAGATCCTCGAGAGCGAGACGGGCCGCGCGCTGCGCGATCTCTATGCCGAGCGGATCTTCGGGCCGGCGGGGATGCG
GACGGCCGAGCTCACCTCGGACACGCGCCACCCGGCCGATGAGGTGGTGGGCTACGAGGGCAGCGATGCAGTGGGCTTCT
TCCCGGCCGACAACGGGATCTTCTGGATCGGCGATGCCGGCATCTCGGCCTCGCTTCAGGACATGCTGGCCTACGAGAGC
TGGATCGATGCCACGCGCAACGATGAAAACTCGATCTACCGCCGCATTTCGGTGCCGCCCGCCTATGTCTGCGGCACGCC
CGCAAGCTACGGCTTCGGCCTCTCGCATGAGACGGTGGCGGGGGTGAAGGTCACGGGCCACGGCGGCGCGCTGCGGGGCT
TCCGGGCGCAGCGGTTCCATGCGGCCGATGAGCGGCTCTCGGTCGTGGTGATCTTCAACCACGAGGCCAGCGCCCATGCG
GCGGCAAGCTCGCTGCTGGCGGCGGCTCTGGGCCACGAAGCGCCGAAGGGCGCGCGCCCGGAGGGCTGGGCCGGCCAATG
GCTCGATCCCGAGAGCGGGCTTCTGCTGCGCGTCGGGGAGGATGCCGAGGGGCTGACGCTGCGCTTCGCGACCGGCCCGG
ACCGGCTGACCGCGGGCGAGGATGGCGTGCCGCGGGGGGCGGGCGTGAGCCTTGCGCGCGAGGGCGCGATGCTCGTCATG
AACCGGACCTCCGACAATCTGACCGTGCGGGCCGAGCCGCTGCCCGTCGTCGCCGTGGCGGATGCGGGCGAGATCGCCGG
GCGCTACCATGCGCGCGAGCTCGAGGCCGATCTCGTGATCGAGGCGCGCGACGGCGGCGCCTATGCGGGCTTCGAGGGGC
TTCTTGGTGCAGGGCCGATGGAGCGGCTGCATCCGGTCGGGCCCGATGTCTGGATCGTCACGACGCGGCGGTCGATGGAT
GCGCCCGCGCCGGGCGACTGGACCCTGCAGGTCCGGCGCGAGGGCGGGGCCGTGACCGGCCTCCGCCTCGGCTGCTGGCT
CGCGCGGCGCATCGACTACGCCCGGGTCTGA

Upstream 100 bases:

>100_bases
ATCGCCTCGCGCCGCCCGCGGGGCGCGTGCGACATCCGGCCATTGCAGCGAGGGCGCGGCTGGGCCACTCTCCGGCCGAG
AAACGACCAGCAGGACCAAG

Downstream 100 bases:

>100_bases
GCCAAAAAAGGGGCCGGCGCACCGCGCCGACCCCCTTGGTCCGCCAGAGGCGGAGCCTCAGTTCTTCACCGTATCCTCGA
GGAAGAAGCGGCCCAGCGGG

Product: D-aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MTLDLDALDRALDALPNLFRGPGGVAGVVKDGQVVASRAWGYADLTRRRPMETGTRLPICSISKQFTCGALLDTLGDTAA
YDARVAEFLPQFEGPLPTLRQLCDNQSGLRDYWALTVLQGAEAAQTFRREDALPLIARMKTGHFPPGTAYSYCNCNFRIV
SEILESETGRALRDLYAERIFGPAGMRTAELTSDTRHPADEVVGYEGSDAVGFFPADNGIFWIGDAGISASLQDMLAYES
WIDATRNDENSIYRRISVPPAYVCGTPASYGFGLSHETVAGVKVTGHGGALRGFRAQRFHAADERLSVVVIFNHEASAHA
AASSLLAAALGHEAPKGARPEGWAGQWLDPESGLLLRVGEDAEGLTLRFATGPDRLTAGEDGVPRGAGVSLAREGAMLVM
NRTSDNLTVRAEPLPVVAVADAGEIAGRYHARELEADLVIEARDGGAYAGFEGLLGAGPMERLHPVGPDVWIVTTRRSMD
APAPGDWTLQVRREGGAVTGLRLGCWLARRIDYARV

Sequences:

>Translated_516_residues
MTLDLDALDRALDALPNLFRGPGGVAGVVKDGQVVASRAWGYADLTRRRPMETGTRLPICSISKQFTCGALLDTLGDTAA
YDARVAEFLPQFEGPLPTLRQLCDNQSGLRDYWALTVLQGAEAAQTFRREDALPLIARMKTGHFPPGTAYSYCNCNFRIV
SEILESETGRALRDLYAERIFGPAGMRTAELTSDTRHPADEVVGYEGSDAVGFFPADNGIFWIGDAGISASLQDMLAYES
WIDATRNDENSIYRRISVPPAYVCGTPASYGFGLSHETVAGVKVTGHGGALRGFRAQRFHAADERLSVVVIFNHEASAHA
AASSLLAAALGHEAPKGARPEGWAGQWLDPESGLLLRVGEDAEGLTLRFATGPDRLTAGEDGVPRGAGVSLAREGAMLVM
NRTSDNLTVRAEPLPVVAVADAGEIAGRYHARELEADLVIEARDGGAYAGFEGLLGAGPMERLHPVGPDVWIVTTRRSMD
APAPGDWTLQVRREGGAVTGLRLGCWLARRIDYARV
>Mature_515_residues
TLDLDALDRALDALPNLFRGPGGVAGVVKDGQVVASRAWGYADLTRRRPMETGTRLPICSISKQFTCGALLDTLGDTAAY
DARVAEFLPQFEGPLPTLRQLCDNQSGLRDYWALTVLQGAEAAQTFRREDALPLIARMKTGHFPPGTAYSYCNCNFRIVS
EILESETGRALRDLYAERIFGPAGMRTAELTSDTRHPADEVVGYEGSDAVGFFPADNGIFWIGDAGISASLQDMLAYESW
IDATRNDENSIYRRISVPPAYVCGTPASYGFGLSHETVAGVKVTGHGGALRGFRAQRFHAADERLSVVVIFNHEASAHAA
ASSLLAAALGHEAPKGARPEGWAGQWLDPESGLLLRVGEDAEGLTLRFATGPDRLTAGEDGVPRGAGVSLAREGAMLVMN
RTSDNLTVRAEPLPVVAVADAGEIAGRYHARELEADLVIEARDGGAYAGFEGLLGAGPMERLHPVGPDVWIVTTRRSMDA
PAPGDWTLQVRREGGAVTGLRLGCWLARRIDYARV

Specific function: Hydrolyzes N-terminal residues in D-amino acid- containing peptides [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR009090
- InterPro:   IPR012856
- InterPro:   IPR012857 [H]

Pfam domain/function: PF00144 Beta-lactamase; PF07930 DAP_B; PF07932 DAP_C [H]

EC number: =3.4.11.19 [H]

Molecular weight: Translated: 55380; Mature: 55249

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDLDALDRALDALPNLFRGPGGVAGVVKDGQVVASRAWGYADLTRRRPMETGTRLPIC
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCCEE
SISKQFTCGALLDTLGDTAAYDARVAEFLPQFEGPLPTLRQLCDNQSGLRDYWALTVLQG
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCC
AEAAQTFRREDALPLIARMKTGHFPPGTAYSYCNCNFRIVSEILESETGRALRDLYAERI
CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
FGPAGMRTAELTSDTRHPADEVVGYEGSDAVGFFPADNGIFWIGDAGISASLQDMLAYES
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHH
WIDATRNDENSIYRRISVPPAYVCGTPASYGFGLSHETVAGVKVTGHGGALRGFRAQRFH
HHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH
AADERLSVVVIFNHEASAHAAASSLLAAALGHEAPKGARPEGWAGQWLDPESGLLLRVGE
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
DAEGLTLRFATGPDRLTAGEDGVPRGAGVSLAREGAMLVMNRTSDNLTVRAEPLPVVAVA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEEEECCCCEEEEE
DAGEIAGRYHARELEADLVIEARDGGAYAGFEGLLGAGPMERLHPVGPDVWIVTTRRSMD
CCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCHHHHCCCCCCEEEEEECCCCC
APAPGDWTLQVRREGGAVTGLRLGCWLARRIDYARV
CCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLDLDALDRALDALPNLFRGPGGVAGVVKDGQVVASRAWGYADLTRRRPMETGTRLPIC
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHCCCCCCCCCCCEE
SISKQFTCGALLDTLGDTAAYDARVAEFLPQFEGPLPTLRQLCDNQSGLRDYWALTVLQG
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCC
AEAAQTFRREDALPLIARMKTGHFPPGTAYSYCNCNFRIVSEILESETGRALRDLYAERI
CHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
FGPAGMRTAELTSDTRHPADEVVGYEGSDAVGFFPADNGIFWIGDAGISASLQDMLAYES
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHH
WIDATRNDENSIYRRISVPPAYVCGTPASYGFGLSHETVAGVKVTGHGGALRGFRAQRFH
HHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH
AADERLSVVVIFNHEASAHAAASSLLAAALGHEAPKGARPEGWAGQWLDPESGLLLRVGE
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
DAEGLTLRFATGPDRLTAGEDGVPRGAGVSLAREGAMLVMNRTSDNLTVRAEPLPVVAVA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCEEEEECCCCEEEEE
DAGEIAGRYHARELEADLVIEARDGGAYAGFEGLLGAGPMERLHPVGPDVWIVTTRRSMD
CCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHCCCCCHHHHCCCCCCEEEEEECCCCC
APAPGDWTLQVRREGGAVTGLRLGCWLARRIDYARV
CCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA