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The map label for this gene is yagS [H]

Identifier: 77465219

GI number: 77465219

Start: 258348

End: 259331

Strand: Direct

Name: yagS [H]

Synonym: RSP_3205

Alternate gene names: 77465219

Gene position: 258348-259331 (Clockwise)

Preceding gene: 77465218

Following gene: 77465220

Centisome position: 27.4

GC content: 69.51

Gene sequence:

>984_bases
ATGAAGGATTTCGCTTATCTTCGCGCCTCCTCCCGCGACGAGGCCACGACCGAGGCGCTGGAGCCCGCGACCCGCTTTCT
GGGCGGCGGCACCAACCTTCTGGATCTGATGAAGCTCGGGATCGAGACGCCCGCCCGGCTGGTGGATGTGAACCGGCTCG
ATCTGGATTTCATCGAAGAGCTGGACGGCGGCCTGCGCATCGGGGCCACGGTGCGCAACAGCGATCTGGCGGCCGATCCG
CGGGTGCGGCGCAGCTACCCCGTCCTGTCCCGCGCCCTCCTGGCCGGGGCGAGCGGTCAGCTCCGCAACATGGCCACCAC
CGCCGGCAACCTTCTTCAGCGCACGCGCTGCCCCTATTTCTACGACACGGACATGGCCTGCAACAAGCGCACCCCCGGTG
CCGGCTGCTCGGCGATCGGCGGCTTTACCCGCTACCACGCGATCCTCGGCGCGTCCGAGGCCTGCATCGCCACCCATCCG
AGCGACATGGCCGTGGCGATGGCCGCACTCGAGGCGGTGGTCGAGATCGAGGCGCCGGGCGGCGCGCGTCGGCATGTGCA
TCTGGCCGATTTCCACCGCCTGCCGGGCGACACGCCCCATATCGAGACCTGTCTCGACCCGGGCGACCTCATCACCGCGG
TGATCCTGCCCGCGCCCGCGGGCGAGCGGCAAGTCTATCGCAAGATCCGGGATCGCGCCTCCTATGCCTTCGCGCTCATC
TCGGTGGCAGCGGTGGTGCGGATGGAAGAGGGCCGGATCGCCACCGCGCGGCTCGCCTTCGGCGGACTGGCCCACAAGCC
ATGGCGCGATCCGGAGGTGGAGGCCTGTCTCGAAGGCGAGACCCCCTCGGACGATCTCTTCGACAGGGCAGCCGACCGGC
TGCTGCAGAGCGCCCGAGGTCAGGGCGAGAACGATTTCAAGATCCCGCTCACGCGGCGCGCCCTGACGGCGGCGCTGCGC
GAAGCCACCGGAGGCATGGCATGA

Upstream 100 bases:

>100_bases
CCGAGCGGATGAGCGGCAACCTCTGCCGCTGTGCCTGCTACCCGAACATTGTCGAAGCGATCGCGAAGGTTGCGGAAGCG
CGCATGGCGGAGGCTGCCGA

Downstream 100 bases:

>100_bases
CCGCTCATCTCGTATTCGACGAGCCCGACAAGCGTAACCGGCTGGATGCCATGGCGCAGGAGGTGGTCGGGCGCCCCATC
GACCGCTCTGAAGGCGCGCT

Product: putative oxidoreductase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKDFAYLRASSRDEATTEALEPATRFLGGGTNLLDLMKLGIETPARLVDVNRLDLDFIEELDGGLRIGATVRNSDLAADP
RVRRSYPVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTDMACNKRTPGAGCSAIGGFTRYHAILGASEACIATHP
SDMAVAMAALEAVVEIEAPGGARRHVHLADFHRLPGDTPHIETCLDPGDLITAVILPAPAGERQVYRKIRDRASYAFALI
SVAAVVRMEEGRIATARLAFGGLAHKPWRDPEVEACLEGETPSDDLFDRAADRLLQSARGQGENDFKIPLTRRALTAALR
EATGGMA

Sequences:

>Translated_327_residues
MKDFAYLRASSRDEATTEALEPATRFLGGGTNLLDLMKLGIETPARLVDVNRLDLDFIEELDGGLRIGATVRNSDLAADP
RVRRSYPVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTDMACNKRTPGAGCSAIGGFTRYHAILGASEACIATHP
SDMAVAMAALEAVVEIEAPGGARRHVHLADFHRLPGDTPHIETCLDPGDLITAVILPAPAGERQVYRKIRDRASYAFALI
SVAAVVRMEEGRIATARLAFGGLAHKPWRDPEVEACLEGETPSDDLFDRAADRLLQSARGQGENDFKIPLTRRALTAALR
EATGGMA
>Mature_327_residues
MKDFAYLRASSRDEATTEALEPATRFLGGGTNLLDLMKLGIETPARLVDVNRLDLDFIEELDGGLRIGATVRNSDLAADP
RVRRSYPVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTDMACNKRTPGAGCSAIGGFTRYHAILGASEACIATHP
SDMAVAMAALEAVVEIEAPGGARRHVHLADFHRLPGDTPHIETCLDPGDLITAVILPAPAGERQVYRKIRDRASYAFALI
SVAAVVRMEEGRIATARLAFGGLAHKPWRDPEVEACLEGETPSDDLFDRAADRLLQSARGQGENDFKIPLTRRALTAALR
EATGGMA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=324, Percent_Identity=59.8765432098765, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 35242; Mature: 35242

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFAYLRASSRDEATTEALEPATRFLGGGTNLLDLMKLGIETPARLVDVNRLDLDFIEE
CCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHEEECCCCCHHHHHH
LDGGLRIGATVRNSDLAADPRVRRSYPVLSRALLAGASGQLRNMATTAGNLLQRTRCPYF
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCE
YDTDMACNKRTPGAGCSAIGGFTRYHAILGASEACIATHPSDMAVAMAALEAVVEIEAPG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEECCC
GARRHVHLADFHRLPGDTPHIETCLDPGDLITAVILPAPAGERQVYRKIRDRASYAFALI
CCCEEEEHHHHHCCCCCCCCHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SVAAVVRMEEGRIATARLAFGGLAHKPWRDPEVEACLEGETPSDDLFDRAADRLLQSARG
HHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
QGENDFKIPLTRRALTAALREATGGMA
CCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKDFAYLRASSRDEATTEALEPATRFLGGGTNLLDLMKLGIETPARLVDVNRLDLDFIEE
CCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHEEECCCCCHHHHHH
LDGGLRIGATVRNSDLAADPRVRRSYPVLSRALLAGASGQLRNMATTAGNLLQRTRCPYF
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCE
YDTDMACNKRTPGAGCSAIGGFTRYHAILGASEACIATHPSDMAVAMAALEAVVEIEAPG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEECCC
GARRHVHLADFHRLPGDTPHIETCLDPGDLITAVILPAPAGERQVYRKIRDRASYAFALI
CCCEEEEHHHHHCCCCCCCCHHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SVAAVVRMEEGRIATARLAFGGLAHKPWRDPEVEACLEGETPSDDLFDRAADRLLQSARG
HHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
QGENDFKIPLTRRALTAALREATGGMA
CCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]