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The map label for this gene is yagT [H]

Identifier: 77465218

GI number: 77465218

Start: 257830

End: 258351

Strand: Direct

Name: yagT [H]

Synonym: RSP_3204

Alternate gene names: 77465218

Gene position: 257830-258351 (Clockwise)

Preceding gene: 77465217

Following gene: 77465219

Centisome position: 27.34

GC content: 67.62

Gene sequence:

>522_bases
ATGAAGACCACGCTCACGATCAACGGCGAGCACCGCGAGATCGAGGCCGAGGCGCGCGTCACCCTGCTCGACGCGTTGCG
TCACGACGTCGGGCTGACGGGCACGAAGAAGGGCTGCGACCACGGCCAGTGCGGCGCCTGCACGGTGATCGTGGACGGTC
GGCGCATAAATTCCTGCCTCACGCTCCTCTGCACCCAGGAGGGGGCGGAGGTCACGACCATCGAGGGTCTGGGCGAGCCC
GGGCGGCTCTCGGCGCTGCAGGAGGCTTTCCTTGCGCAGGACGGGTTCCAGTGCGGCTACTGCACCCCGGGCCAGATCTG
CTCTGCCACCGCCATGATCGAGGAGGCCGCGAAGGGCTGGCCCAGCTGGGTGTCCGAAGACCTAGAGGGCGAGGCCGTGC
TCAGCCGCGAGGAGATATCCGAGCGGATGAGCGGCAACCTCTGCCGCTGTGCCTGCTACCCGAACATTGTCGAAGCGATC
GCGAAGGTTGCGGAAGCGCGCATGGCGGAGGCTGCCGAATGA

Upstream 100 bases:

>100_bases
CGGCAGGAGAGCGCCGCGCAGAGGCGGCCGTCCCGTCGCAGACGGAACCTCGGGCAGCCTCGTCTGTTGCTCCGGCTGAA
CAGCCAGCCGGAGGGCAAGC

Downstream 100 bases:

>100_bases
AGGATTTCGCTTATCTTCGCGCCTCCTCCCGCGACGAGGCCACGACCGAGGCGCTGGAGCCCGCGACCCGCTTTCTGGGC
GGCGGCACCAACCTTCTGGA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKTTLTINGEHREIEAEARVTLLDALRHDVGLTGTKKGCDHGQCGACTVIVDGRRINSCLTLLCTQEGAEVTTIEGLGEP
GRLSALQEAFLAQDGFQCGYCTPGQICSATAMIEEAAKGWPSWVSEDLEGEAVLSREEISERMSGNLCRCACYPNIVEAI
AKVAEARMAEAAE

Sequences:

>Translated_173_residues
MKTTLTINGEHREIEAEARVTLLDALRHDVGLTGTKKGCDHGQCGACTVIVDGRRINSCLTLLCTQEGAEVTTIEGLGEP
GRLSALQEAFLAQDGFQCGYCTPGQICSATAMIEEAAKGWPSWVSEDLEGEAVLSREEISERMSGNLCRCACYPNIVEAI
AKVAEARMAEAAE
>Mature_173_residues
MKTTLTINGEHREIEAEARVTLLDALRHDVGLTGTKKGCDHGQCGACTVIVDGRRINSCLTLLCTQEGAEVTTIEGLGEP
GRLSALQEAFLAQDGFQCGYCTPGQICSATAMIEEAAKGWPSWVSEDLEGEAVLSREEISERMSGNLCRCACYPNIVEAI
AKVAEARMAEAAE

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=175, Percent_Identity=34.2857142857143, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=56.7073170731707, Blast_Score=202, Evalue=1e-53,
Organism=Escherichia coli, GI1789232, Length=155, Percent_Identity=40.6451612903226, Blast_Score=106, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17540638, Length=169, Percent_Identity=35.5029585798817, Blast_Score=93, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17539860, Length=167, Percent_Identity=30.5389221556886, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32566215, Length=167, Percent_Identity=29.940119760479, Blast_Score=83, Evalue=8e-17,
Organism=Drosophila melanogaster, GI17737937, Length=167, Percent_Identity=38.9221556886228, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24647193, Length=178, Percent_Identity=34.2696629213483, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24647199, Length=182, Percent_Identity=32.4175824175824, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24647201, Length=181, Percent_Identity=32.0441988950276, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647197, Length=180, Percent_Identity=32.7777777777778, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647195, Length=180, Percent_Identity=32.7777777777778, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 18495; Mature: 18495

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLTINGEHREIEAEARVTLLDALRHDVGLTGTKKGCDHGQCGACTVIVDGRRINSCL
CCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH
TLLCTQEGAEVTTIEGLGEPGRLSALQEAFLAQDGFQCGYCTPGQICSATAMIEEAAKGW
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSWVSEDLEGEAVLSREEISERMSGNLCRCACYPNIVEAIAKVAEARMAEAAE
HHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTLTINGEHREIEAEARVTLLDALRHDVGLTGTKKGCDHGQCGACTVIVDGRRINSCL
CCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH
TLLCTQEGAEVTTIEGLGEPGRLSALQEAFLAQDGFQCGYCTPGQICSATAMIEEAAKGW
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSWVSEDLEGEAVLSREEISERMSGNLCRCACYPNIVEAIAKVAEARMAEAAE
HHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]