| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465165
Identifier: 77465165
GI number: 77465165
Start: 200091
End: 201083
Strand: Reverse
Name: 77465165
Synonym: RSP_3151
Alternate gene names: NA
Gene position: 201083-200091 (Counterclockwise)
Preceding gene: 77465166
Following gene: 77465164
Centisome position: 21.32
GC content: 66.26
Gene sequence:
>993_bases ATGACCATGGATCTGCGCACCGGACTGGCCGCCCTCGCGCTCGCGGCGGGGCTTGCCCTGCCGGCCGCCCCGGCCCTCGC CGAAATGTCCGAGATCACCATCGCGCGCCAGCCGAGCATCGGGCACCTGCCGCTGATGATCATGCAGGAGCGGCGGCTGA TCGAGACGATGGCCGAGGCCGAGGGGCTGGGCGAGGTGAAGGTGAATTACGCCACCTTCGCCGGCGGCTCGAACATGAAC GACGCGCTTCTGTCGAACACGATCCAGTTCGCCGCGGGCGGCGTGCCGCCGCTGATCCTGCTCTGGTCGAAGACGGCCGG AACCTCGAACGAGGTGAAGGGCGTGGCGGCGATGAACTCGATGCCGCTCCTGATGAACGTCAACCGCGAGGACATCCGCT CGATCGAGGATTTCAAGCCGGGCGACAAGATCGCCCTGCCCTCGGTCAAGGTGTCGGTGCAGGCGATGGTGCTGCAGATG GCGGCGGCGAAGATCTGGGGCGACGAGAATTACGGCAAGCTCGACCCGCTGACCGTCTCGATGTCCCATCCCGACGGGCT CGCGGCGCTCCTCGCCAGGCAGGAGGTGACGGCCCATTTCACCGCGTCGCCCGCGCAGGACATGGCGCTGCGCGAGCCGG GCGTCCATACGGTGCTGAACTCGTTCGACGTGATGGGCGGGCCCGTGACCTTCAACGTCGTCTGGACGACCAAGGCCTTC CATGACGACAATCCGAAGCTCTTCGACATCTTCCGCCGCGCGCTGGCTCAGGCGGTCGAGGTGGTGAACGAGGATCCGGC CGAGGCGGTGCAGGTCTACCTCCGTCAGGCGGGCAATGCGACGGACCCCGAGCTTCTGGCCTCGATCCTCGCGGATCCTC AGGTCGACTATACCGTCGAGCCTTCGGGCATCGACAAGTATCTCGACTTCATGCGCCGGATCGGGACGGTGAAGGACAAC GGCCAGCCGTGGGAGGCGATGTTCTTCGAATAG
Upstream 100 bases:
>100_bases CCTACGTCGAGTTCCTGAGCGAGTCCGGCCTCATCAAGACCTCGGCCGAGGACTGGAGCGAGATCTTCTTCGACACGATG TCGGGCAAGGAGGGAAGCTG
Downstream 100 bases:
>100_bases GCTCGCCCTGCCCGTCAAACCTGACGCGGCACCCGCCCGAAAGAGATCGCCCACCCGAAGAACACGGCCTTCCAGCCCCT TCCTGCGGTCAGGAGCGCTC
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTMDLRTGLAALALAAGLALPAAPALAEMSEITIARQPSIGHLPLMIMQERRLIETMAEAEGLGEVKVNYATFAGGSNMN DALLSNTIQFAAGGVPPLILLWSKTAGTSNEVKGVAAMNSMPLLMNVNREDIRSIEDFKPGDKIALPSVKVSVQAMVLQM AAAKIWGDENYGKLDPLTVSMSHPDGLAALLARQEVTAHFTASPAQDMALREPGVHTVLNSFDVMGGPVTFNVVWTTKAF HDDNPKLFDIFRRALAQAVEVVNEDPAEAVQVYLRQAGNATDPELLASILADPQVDYTVEPSGIDKYLDFMRRIGTVKDN GQPWEAMFFE
Sequences:
>Translated_330_residues MTMDLRTGLAALALAAGLALPAAPALAEMSEITIARQPSIGHLPLMIMQERRLIETMAEAEGLGEVKVNYATFAGGSNMN DALLSNTIQFAAGGVPPLILLWSKTAGTSNEVKGVAAMNSMPLLMNVNREDIRSIEDFKPGDKIALPSVKVSVQAMVLQM AAAKIWGDENYGKLDPLTVSMSHPDGLAALLARQEVTAHFTASPAQDMALREPGVHTVLNSFDVMGGPVTFNVVWTTKAF HDDNPKLFDIFRRALAQAVEVVNEDPAEAVQVYLRQAGNATDPELLASILADPQVDYTVEPSGIDKYLDFMRRIGTVKDN GQPWEAMFFE >Mature_329_residues TMDLRTGLAALALAAGLALPAAPALAEMSEITIARQPSIGHLPLMIMQERRLIETMAEAEGLGEVKVNYATFAGGSNMND ALLSNTIQFAAGGVPPLILLWSKTAGTSNEVKGVAAMNSMPLLMNVNREDIRSIEDFKPGDKIALPSVKVSVQAMVLQMA AAKIWGDENYGKLDPLTVSMSHPDGLAALLARQEVTAHFTASPAQDMALREPGVHTVLNSFDVMGGPVTFNVVWTTKAFH DDNPKLFDIFRRALAQAVEVVNEDPAEAVQVYLRQAGNATDPELLASILADPQVDYTVEPSGIDKYLDFMRRIGTVKDNG QPWEAMFFE
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35623; Mature: 35492
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDLRTGLAALALAAGLALPAAPALAEMSEITIARQPSIGHLPLMIMQERRLIETMAEA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH EGLGEVKVNYATFAGGSNMNDALLSNTIQFAAGGVPPLILLWSKTAGTSNEVKGVAAMNS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCC MPLLMNVNREDIRSIEDFKPGDKIALPSVKVSVQAMVLQMAAAKIWGDENYGKLDPLTVS CCEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE MSHPDGLAALLARQEVTAHFTASPAQDMALREPGVHTVLNSFDVMGGPVTFNVVWTTKAF ECCCCHHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEEE HDDNPKLFDIFRRALAQAVEVVNEDPAEAVQVYLRQAGNATDPELLASILADPQVDYTVE ECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEC PSGIDKYLDFMRRIGTVKDNGQPWEAMFFE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TMDLRTGLAALALAAGLALPAAPALAEMSEITIARQPSIGHLPLMIMQERRLIETMAEA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH EGLGEVKVNYATFAGGSNMNDALLSNTIQFAAGGVPPLILLWSKTAGTSNEVKGVAAMNS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCC MPLLMNVNREDIRSIEDFKPGDKIALPSVKVSVQAMVLQMAAAKIWGDENYGKLDPLTVS CCEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE MSHPDGLAALLARQEVTAHFTASPAQDMALREPGVHTVLNSFDVMGGPVTFNVVWTTKAF ECCCCHHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEEEE HDDNPKLFDIFRRALAQAVEVVNEDPAEAVQVYLRQAGNATDPELLASILADPQVDYTVE ECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEC PSGIDKYLDFMRRIGTVKDNGQPWEAMFFE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA