| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
Click here to switch to the map view.
The map label for this gene is 77465127
Identifier: 77465127
GI number: 77465127
Start: 159306
End: 160385
Strand: Reverse
Name: 77465127
Synonym: RSP_3114
Alternate gene names: NA
Gene position: 160385-159306 (Counterclockwise)
Preceding gene: 77465128
Following gene: 77465126
Centisome position: 17.01
GC content: 67.31
Gene sequence:
>1080_bases ATGCTGCCGCCCGCCGTTGGGCGCGGTCCTTTCCCAACTCCGGTCGGTCCCGTGCAACGCTATCGCTGCCCCTCCTGTCA TCAGGAAATCTTCTTCCGCAACACGGCCTGCCTGGCCTGCGGCATCCAGCTGCTCTTCGACCCGGACAGGGGCTTCTCGG ACATGGCGGAAACCGGCCATCCCTGCGCCAACCGCGGTCAGATCAACTGCAACTGGTCGGCCGACGAGCCGGGTGCCCTG TGCCTGTCCTGCCAGCATACGACGGTGGTGCCGGACCTGTCGGTTCCCGCCAACATCGACCGGTGGGAGAGGATCGAGAC CGTGAAGCGGCCCCTGATCCTGATGCTGCACCGGCTGGGCCTGCCGCTCTTCGATGAGGCGGGCATGCCCGTCCCCCGGT TCGAACTGAAGGGCGAAACCGGAGACGCCACGGCACCGCGGGTGCTCACCGGCCATGCAGAGGGCACGATCACCCTCAAT ATCGCCGAGGCGGACGATGCCGAGCGCGAGCGCATCCGGGCGGAGATGAACGAGCCCTACCGCACCCTGACGGGGCATCT GCGACACGAGGTGGCCCACCACTACTGGGATGTCCTGACCGAAGCACGGCAGGACCGGCTCGAGACCCTGCGTGCGATCT TCGGCGACGACCGGCAGGATTACGGTGCGGCCCTTCAGGCGCATTATGCCGAAGGCGCCCCGCCCGACTGGGCCGAGAGC TACATCTCGGCCTATGCGACGGCCCATCCCTGGGAAGATTTCGCCGAGACCTGGGCGCATGTCTTCCATCTGCTCGACGG GCTGGAGACGGCGCAGGCCTTCGGGCTGAAGGCACCGCAGGCTATGCCGGAGGGGCTGGAGCGCCTTGTGCGCGAACCGA TGCCGCACCTCGCACAGGCCTGGGTCGAGCTGACGATCGCCCTGAATGCCGTGAACGAGGCCATGGGCCATGAGACCTTC TACCCGTTCGTTCTGGCCCCGCCGGTGGTCGCCAAGCAGGAGGCCATCCGCAGCCTGATCGTCGAGGCAAACTCCGGCGA CGCTGCGGTGGCGCCATCCGGCAACGCCTTGCCACGGTAA
Upstream 100 bases:
>100_bases CCAGAAAGCGCGGCTGATCCAGACTCTGTCCGGCGGCCGGCGTCCCAATGCGAGGGCCGGCCGCCTCTGCGCATCCGGTT CCGACTGCGGCGGGAACCGG
Downstream 100 bases:
>100_bases GGCCGCGACGGAGCGGGAGGACCGGCACGAGGTCTGCCTGACCACCGCTCGCAGGTCCACGAGAGCAGGCTGCCGCTCGT CTTGTCGGACAATGAACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MLPPAVGRGPFPTPVGPVQRYRCPSCHQEIFFRNTACLACGIQLLFDPDRGFSDMAETGHPCANRGQINCNWSADEPGAL CLSCQHTTVVPDLSVPANIDRWERIETVKRPLILMLHRLGLPLFDEAGMPVPRFELKGETGDATAPRVLTGHAEGTITLN IAEADDAERERIRAEMNEPYRTLTGHLRHEVAHHYWDVLTEARQDRLETLRAIFGDDRQDYGAALQAHYAEGAPPDWAES YISAYATAHPWEDFAETWAHVFHLLDGLETAQAFGLKAPQAMPEGLERLVREPMPHLAQAWVELTIALNAVNEAMGHETF YPFVLAPPVVAKQEAIRSLIVEANSGDAAVAPSGNALPR
Sequences:
>Translated_359_residues MLPPAVGRGPFPTPVGPVQRYRCPSCHQEIFFRNTACLACGIQLLFDPDRGFSDMAETGHPCANRGQINCNWSADEPGAL CLSCQHTTVVPDLSVPANIDRWERIETVKRPLILMLHRLGLPLFDEAGMPVPRFELKGETGDATAPRVLTGHAEGTITLN IAEADDAERERIRAEMNEPYRTLTGHLRHEVAHHYWDVLTEARQDRLETLRAIFGDDRQDYGAALQAHYAEGAPPDWAES YISAYATAHPWEDFAETWAHVFHLLDGLETAQAFGLKAPQAMPEGLERLVREPMPHLAQAWVELTIALNAVNEAMGHETF YPFVLAPPVVAKQEAIRSLIVEANSGDAAVAPSGNALPR >Mature_359_residues MLPPAVGRGPFPTPVGPVQRYRCPSCHQEIFFRNTACLACGIQLLFDPDRGFSDMAETGHPCANRGQINCNWSADEPGAL CLSCQHTTVVPDLSVPANIDRWERIETVKRPLILMLHRLGLPLFDEAGMPVPRFELKGETGDATAPRVLTGHAEGTITLN IAEADDAERERIRAEMNEPYRTLTGHLRHEVAHHYWDVLTEARQDRLETLRAIFGDDRQDYGAALQAHYAEGAPPDWAES YISAYATAHPWEDFAETWAHVFHLLDGLETAQAFGLKAPQAMPEGLERLVREPMPHLAQAWVELTIALNAVNEAMGHETF YPFVLAPPVVAKQEAIRSLIVEANSGDAAVAPSGNALPR
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 39673; Mature: 39673
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPAVGRGPFPTPVGPVQRYRCPSCHQEIFFRNTACLACGIQLLFDPDRGFSDMAETGH CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHCCCEEECCCCCHHHHHHCCC PCANRGQINCNWSADEPGALCLSCQHTTVVPDLSVPANIDRWERIETVKRPLILMLHRLG CCCCCCEEEEECCCCCCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPLFDEAGMPVPRFELKGETGDATAPRVLTGHAEGTITLNIAEADDAERERIRAEMNEPY CCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCH RTLTGHLRHEVAHHYWDVLTEARQDRLETLRAIFGDDRQDYGAALQAHYAEGAPPDWAES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH YISAYATAHPWEDFAETWAHVFHLLDGLETAQAFGLKAPQAMPEGLERLVREPMPHLAQA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH WVELTIALNAVNEAMGHETFYPFVLAPPVVAKQEAIRSLIVEANSGDAAVAPSGNALPR HHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure MLPPAVGRGPFPTPVGPVQRYRCPSCHQEIFFRNTACLACGIQLLFDPDRGFSDMAETGH CCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHCCCEEECCCCCHHHHHHCCC PCANRGQINCNWSADEPGALCLSCQHTTVVPDLSVPANIDRWERIETVKRPLILMLHRLG CCCCCCEEEEECCCCCCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPLFDEAGMPVPRFELKGETGDATAPRVLTGHAEGTITLNIAEADDAERERIRAEMNEPY CCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCH RTLTGHLRHEVAHHYWDVLTEARQDRLETLRAIFGDDRQDYGAALQAHYAEGAPPDWAES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH YISAYATAHPWEDFAETWAHVFHLLDGLETAQAFGLKAPQAMPEGLERLVREPMPHLAQA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH WVELTIALNAVNEAMGHETFYPFVLAPPVVAKQEAIRSLIVEANSGDAAVAPSGNALPR HHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]