Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 77465126

GI number: 77465126

Start: 157517

End: 158827

Strand: Reverse

Name: dadA [H]

Synonym: RSP_3113

Alternate gene names: 77465126

Gene position: 158827-157517 (Counterclockwise)

Preceding gene: 77465127

Following gene: 77465122

Centisome position: 16.84

GC content: 72.31

Gene sequence:

>1311_bases
ATGAGGATCGTGGTTCTGGGCGCGGGCGTCGTCGGTGTCACGTCGGCTTACGAGCTGGCGCGGGCGGGGCACGAGGTGAC
GGTGGTGGATCGCCAGCCCGCGGCGGCGCTCGAGACCTCCTTCGCCAATGCGGGCGAGATCAGCCCGGGCTATGCCTCGC
CCTGGGCCGCGCCCGGCATCCCCGCCAAGGCGCTGCGCTGGATGTTCATGAAGCACGCGCCGCTGGTCATCCGGCCGCGG
CTCGACGCGGCGCAGGTCCGCTTCCTTCTGGCGATCCTGCGCAACTGCACGCCTGCGGCCTATGCGCAGAACAAGGGCCG
CATGGTGCGGCTTGCGGAATATTCGCGCGACTGCCTCACCGATCTTCGCGCCACGACCGGCCTCGCCTTCGACGAGCGCC
AGCAGGGCACGCTTCAGCTCTTCCGTTCGCAGAAGCAGCTCGACGCCGCCGCGCGCGACATCGAGGTGCTGCGCGCAGGC
GGGGTGCCGTTCGAGCTTCTGGATGCCGACGGCTGTCTCGCCGCCGAGCCGGGTCTGCGGGCCGCGCGCGACAGGATCGC
GGGCGGGCTGCGCCTGACGGGCGACGAGACGGGCGACTGTTTCAAGTTCACGCAAGGGCTCGCGGGTCTGGCCGAGGAAG
GCGGCGTGCGCTTCCGCTACGGAACCGGCGTCGAGCGTCTGAGGGTCGAGGGCGGCCGCGTCACGGGCGTCGAGACCACC
AAGGGCACGTTCCTCGCCGATGCCGTCGTCGTGGCGCTCGGCTCCCATTCGCCCGCGCTGGTCGCGCCGCTCGGGCTGCG
GCTGCCCGTCTATCCGGTGAAGGGCTATTCGATCACGGTGCCCATCGTCGATGCCGATCGGGCGCCGGTCTCGACCGTGA
TGGACGAGACCTACAAGATCGCGATCACGCGGCTCGGCACCCGGATCCGTGTGGGCGGCATGGCCGAGGTGGCGGGCTTC
AGCGCCACCCTGCCCCCGGCACGGCGCGAGACGCTTGCCATGTCGGTGAACGACCTCTTCGGCGGCGCGGGCGATCTGTC
GCGCGCGAGCTTCTGGACCGGCCTCCGGCCGATGACGCCGGACGGCACGCCCGTGGTGGGCCGCACGCCGGTGGCGGGCC
TCTGGCTCAACACGGGGCACGGGACGCTCGGCTGGACGATGGCCGCAGGCTCGGCGCGGGTGCTGTCGGATCTCATCGAC
GGGCGCGCGCCCGAGATCGAGAGTGCCGATCTCGGCATCGAGCGCTATGCCGCCCCAGGCCGCCGCGCGCGGCCCGCGGT
CAGGCTCAACCCGGCCCGGCAGGCGGGCTGA

Upstream 100 bases:

>100_bases
GGAGCATCGTGCTCCCCGCCCCGATCTACCGGGCATATTCACCAGAACATTCTCATCGGGATCGCCTAGGTTCTCGCAAG
GTTCCAGCAGGAGGGCGGGC

Downstream 100 bases:

>100_bases
AGGCGGACGGGCGCGCGGGGCCCCTCCCACGGCTCGGGCTTCACGCCCGGGCTTCGGAGCGCGCGCCCGCTTCTCCGGGT
CGGGCGGATGCGGGATCGGC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MRIVVLGAGVVGVTSAYELARAGHEVTVVDRQPAAALETSFANAGEISPGYASPWAAPGIPAKALRWMFMKHAPLVIRPR
LDAAQVRFLLAILRNCTPAAYAQNKGRMVRLAEYSRDCLTDLRATTGLAFDERQQGTLQLFRSQKQLDAAARDIEVLRAG
GVPFELLDADGCLAAEPGLRAARDRIAGGLRLTGDETGDCFKFTQGLAGLAEEGGVRFRYGTGVERLRVEGGRVTGVETT
KGTFLADAVVVALGSHSPALVAPLGLRLPVYPVKGYSITVPIVDADRAPVSTVMDETYKIAITRLGTRIRVGGMAEVAGF
SATLPPARRETLAMSVNDLFGGAGDLSRASFWTGLRPMTPDGTPVVGRTPVAGLWLNTGHGTLGWTMAAGSARVLSDLID
GRAPEIESADLGIERYAAPGRRARPAVRLNPARQAG

Sequences:

>Translated_436_residues
MRIVVLGAGVVGVTSAYELARAGHEVTVVDRQPAAALETSFANAGEISPGYASPWAAPGIPAKALRWMFMKHAPLVIRPR
LDAAQVRFLLAILRNCTPAAYAQNKGRMVRLAEYSRDCLTDLRATTGLAFDERQQGTLQLFRSQKQLDAAARDIEVLRAG
GVPFELLDADGCLAAEPGLRAARDRIAGGLRLTGDETGDCFKFTQGLAGLAEEGGVRFRYGTGVERLRVEGGRVTGVETT
KGTFLADAVVVALGSHSPALVAPLGLRLPVYPVKGYSITVPIVDADRAPVSTVMDETYKIAITRLGTRIRVGGMAEVAGF
SATLPPARRETLAMSVNDLFGGAGDLSRASFWTGLRPMTPDGTPVVGRTPVAGLWLNTGHGTLGWTMAAGSARVLSDLID
GRAPEIESADLGIERYAAPGRRARPAVRLNPARQAG
>Mature_436_residues
MRIVVLGAGVVGVTSAYELARAGHEVTVVDRQPAAALETSFANAGEISPGYASPWAAPGIPAKALRWMFMKHAPLVIRPR
LDAAQVRFLLAILRNCTPAAYAQNKGRMVRLAEYSRDCLTDLRATTGLAFDERQQGTLQLFRSQKQLDAAARDIEVLRAG
GVPFELLDADGCLAAEPGLRAARDRIAGGLRLTGDETGDCFKFTQGLAGLAEEGGVRFRYGTGVERLRVEGGRVTGVETT
KGTFLADAVVVALGSHSPALVAPLGLRLPVYPVKGYSITVPIVDADRAPVSTVMDETYKIAITRLGTRIRVGGMAEVAGF
SATLPPARRETLAMSVNDLFGGAGDLSRASFWTGLRPMTPDGTPVVGRTPVAGLWLNTGHGTLGWTMAAGSARVLSDLID
GRAPEIESADLGIERYAAPGRRARPAVRLNPARQAG

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=425, Percent_Identity=56.9411764705882, Blast_Score=500, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46152; Mature: 46152

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVVLGAGVVGVTSAYELARAGHEVTVVDRQPAAALETSFANAGEISPGYASPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PAKALRWMFMKHAPLVIRPRLDAAQVRFLLAILRNCTPAAYAQNKGRMVRLAEYSRDCLT
CHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHH
DLRATTGLAFDERQQGTLQLFRSQKQLDAAARDIEVLRAGGVPFELLDADGCLAAEPGLR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCHH
AARDRIAGGLRLTGDETGDCFKFTQGLAGLAEEGGVRFRYGTGVERLRVEGGRVTGVETT
HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEEECC
KGTFLADAVVVALGSHSPALVAPLGLRLPVYPVKGYSITVPIVDADRAPVSTVMDETYKI
CCCHHHHHHHEEECCCCCEEEECCCCCCEEEEECCCEEEEEEEECCCCCHHHHHCCHHEE
AITRLGTRIRVGGMAEVAGFSATLPPARRETLAMSVNDLFGGAGDLSRASFWTGLRPMTP
EEEECCCEEEECCCHHHCCCCCCCCCCHHHHEEEEHHHHCCCCCCCCHHHHHCCCCCCCC
DGTPVVGRTPVAGLWLNTGHGTLGWTMAAGSARVLSDLIDGRAPEIESADLGIERYAAPG
CCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
RRARPAVRLNPARQAG
CCCCCCEEECCHHCCC
>Mature Secondary Structure
MRIVVLGAGVVGVTSAYELARAGHEVTVVDRQPAAALETSFANAGEISPGYASPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PAKALRWMFMKHAPLVIRPRLDAAQVRFLLAILRNCTPAAYAQNKGRMVRLAEYSRDCLT
CHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHH
DLRATTGLAFDERQQGTLQLFRSQKQLDAAARDIEVLRAGGVPFELLDADGCLAAEPGLR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCHH
AARDRIAGGLRLTGDETGDCFKFTQGLAGLAEEGGVRFRYGTGVERLRVEGGRVTGVETT
HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEEECC
KGTFLADAVVVALGSHSPALVAPLGLRLPVYPVKGYSITVPIVDADRAPVSTVMDETYKI
CCCHHHHHHHEEECCCCCEEEECCCCCCEEEEECCCEEEEEEEECCCCCHHHHHCCHHEE
AITRLGTRIRVGGMAEVAGFSATLPPARRETLAMSVNDLFGGAGDLSRASFWTGLRPMTP
EEEECCCEEEECCCHHHCCCCCCCCCCHHHHEEEEHHHHCCCCCCCCHHHHHCCCCCCCC
DGTPVVGRTPVAGLWLNTGHGTLGWTMAAGSARVLSDLIDGRAPEIESADLGIERYAAPG
CCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
RRARPAVRLNPARQAG
CCCCCCEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA