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The map label for this gene is trg [H]

Identifier: 77465121

GI number: 77465121

Start: 153123

End: 154811

Strand: Reverse

Name: trg [H]

Synonym: RSP_3108

Alternate gene names: 77465121

Gene position: 154811-153123 (Counterclockwise)

Preceding gene: 77465122

Following gene: 77465120

Centisome position: 16.42

GC content: 69.27

Gene sequence:

>1689_bases
ATGTCCATCAAGTTGAAGCTTGCCGCCGCCTTCCTCTTCGTCTTTCTCCTCTTCACTGCAGCCACCGCTCTGACGCTGAT
GCGGCTGGGCACGATGGATCGCGAGGTCGAGCGCATGGTCCGGGTCGAGCAGCCGGCCGCCCAGCTGGGTGTGCAGCTCG
TTAACCAACAACAGCGCGAATCCCTCGCGCTCCGCGACCACATCATCGCCACCGAGGATGAACAACGTCGCAGTGCCGAG
GAGACGCTTCTCGCCGCCCGGCAGCAGCGCAACGAGATATACGAGCGTCTCAAGCCGCTGTTGACGGACGCGGACGACGC
GGCCCTGCTCAAGCGGCTGGGCGAAGTGATGGCGACCGGGACCGAGCGTATCGACCGTGCGCTCGCCAGCTCGAAGGCCG
GCGACACGAGCGGCGCCGCCCGGATCCTTGCGGATCCCTCCTCGAAGACCAGCCGTGCGGAGCGGACGAAGCTGCTCTCC
GACCTGCAGGACCGGCGCGCCCGGAACATTGCCGAGGCGGCCGCCAAGGCCGATGCGAGCTTCTCGAAGGCGCAGCGCGA
TCTCATCCTGTCGCTGGCGATTGCCGTCGTGCTGGGAGGCGTTGCCGTCACCCTGATCGTGCGCTCCATTTCCCGCGGGC
TCGATCAGGCGCTGGTGCTTGCCGAACGGGTGGCCGAAGGGGATCTCACCCTCACGACCCGAACCCATGCGCGCGACGAG
ATCGGACGGCTTCTCGACGCGAACAACCGCATGGTGATGAAGTTGCGCGAAATGGTGGGCACGATCACCGGCGCGGTGAA
CCGGGTGAGCAGCGGCAGCTCCTCCATGGCCTCCACCTCCGAAGAACTGTCGCAGGGCGCTCAGGAGCAGGCCTCGGCCA
CCGCCGAGGCCTCCGCCTCGGTGGAGCAGATGGCCGCGAACATCCGCCAGACCGCCGACAATGCAGGCAATACCGAAACC
GTGGCCCGCACCTCGGCGGACCGGGCTCAGGCCTCGGGGTCGGCGGTGAACGAGGCGGTCGACGCCATGCAGGCCATTGC
CGAGCGTATCCTGGTCGTGCAGGAAATCGCGCGCCAGACCGATCTTCTGGCGCTGAACGCAGCGGTCGAGGCCGCCCGGG
CGGGCGAGCACGGGCGCGGCTTCGCGGTCGTCGCGGCCGAAGTGCGCAAGCTCGCCGAACGCAGCCGCGGCGCTGCCGAG
GAGATCTCCGCCCTCTCGGCCCGCACCCTGCGTACGGCGAGTGCCGCCGGCGAGATGCTGGGCCAGCTCCTGCCGGACAT
CGAGCGCACCTCGACGCTGGTCAGCGGCATCTCGGTCGCCTCCCGAGAACTGGCGCTCGGAGCGCAGCAGGTGGCGGCGG
CGATCCAGCAGCTCGACAGCGTGACCCAGCAGACGAGTTCTGCCGCGACGGGTCTCGCCGCGGGGGCAGAGGCGCTCTCG
ACGCAGGCGAACGACCTCCGCCGGACGATGGGCCAGTTCCGTCTGGGCTCCGGCAACGGCTCCGTGGCCGAGGCTGCGCC
GTCCCTGCCGGAAGAAGCAGAGGCGCCGGCCCGCAAACCCGTTCGGGCATCCATCGGTTCGACGGGGCGCGCGCGGACGG
TGACGGCAGGCGGCTTCGACTTCGACATGGGCGAGAGCGCGGGCGGTGATCCGGTCGACAGGGAGTTCCGGCGTCATGAT
GCAGCCTGA

Upstream 100 bases:

>100_bases
ATCGGAGATCGCCTCGGCCGCCGCTTGCGGCTGCCCCCGTGAAATCGGGCTCGCCATCTGCGTGGGCCACTCGATGTCTG
TTGAAGGAACTGCGATTGCC

Downstream 100 bases:

>100_bases
CCCAGCGGAGGCTGCGCATCCCCCCATGCCGCAGCGCCCTCTCCCCGGCCCGGGCTGTGACCGGAACCTTAGCCACGTCT
CGCCCCGGGCGCCCGCCTCC

Product: putative methyl accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSIKLKLAAAFLFVFLLFTAATALTLMRLGTMDREVERMVRVEQPAAQLGVQLVNQQQRESLALRDHIIATEDEQRRSAE
ETLLAARQQRNEIYERLKPLLTDADDAALLKRLGEVMATGTERIDRALASSKAGDTSGAARILADPSSKTSRAERTKLLS
DLQDRRARNIAEAAAKADASFSKAQRDLILSLAIAVVLGGVAVTLIVRSISRGLDQALVLAERVAEGDLTLTTRTHARDE
IGRLLDANNRMVMKLREMVGTITGAVNRVSSGSSSMASTSEELSQGAQEQASATAEASASVEQMAANIRQTADNAGNTET
VARTSADRAQASGSAVNEAVDAMQAIAERILVVQEIARQTDLLALNAAVEAARAGEHGRGFAVVAAEVRKLAERSRGAAE
EISALSARTLRTASAAGEMLGQLLPDIERTSTLVSGISVASRELALGAQQVAAAIQQLDSVTQQTSSAATGLAAGAEALS
TQANDLRRTMGQFRLGSGNGSVAEAAPSLPEEAEAPARKPVRASIGSTGRARTVTAGGFDFDMGESAGGDPVDREFRRHD
AA

Sequences:

>Translated_562_residues
MSIKLKLAAAFLFVFLLFTAATALTLMRLGTMDREVERMVRVEQPAAQLGVQLVNQQQRESLALRDHIIATEDEQRRSAE
ETLLAARQQRNEIYERLKPLLTDADDAALLKRLGEVMATGTERIDRALASSKAGDTSGAARILADPSSKTSRAERTKLLS
DLQDRRARNIAEAAAKADASFSKAQRDLILSLAIAVVLGGVAVTLIVRSISRGLDQALVLAERVAEGDLTLTTRTHARDE
IGRLLDANNRMVMKLREMVGTITGAVNRVSSGSSSMASTSEELSQGAQEQASATAEASASVEQMAANIRQTADNAGNTET
VARTSADRAQASGSAVNEAVDAMQAIAERILVVQEIARQTDLLALNAAVEAARAGEHGRGFAVVAAEVRKLAERSRGAAE
EISALSARTLRTASAAGEMLGQLLPDIERTSTLVSGISVASRELALGAQQVAAAIQQLDSVTQQTSSAATGLAAGAEALS
TQANDLRRTMGQFRLGSGNGSVAEAAPSLPEEAEAPARKPVRASIGSTGRARTVTAGGFDFDMGESAGGDPVDREFRRHD
AA
>Mature_561_residues
SIKLKLAAAFLFVFLLFTAATALTLMRLGTMDREVERMVRVEQPAAQLGVQLVNQQQRESLALRDHIIATEDEQRRSAEE
TLLAARQQRNEIYERLKPLLTDADDAALLKRLGEVMATGTERIDRALASSKAGDTSGAARILADPSSKTSRAERTKLLSD
LQDRRARNIAEAAAKADASFSKAQRDLILSLAIAVVLGGVAVTLIVRSISRGLDQALVLAERVAEGDLTLTTRTHARDEI
GRLLDANNRMVMKLREMVGTITGAVNRVSSGSSSMASTSEELSQGAQEQASATAEASASVEQMAANIRQTADNAGNTETV
ARTSADRAQASGSAVNEAVDAMQAIAERILVVQEIARQTDLLALNAAVEAARAGEHGRGFAVVAAEVRKLAERSRGAAEE
ISALSARTLRTASAAGEMLGQLLPDIERTSTLVSGISVASRELALGAQQVAAAIQQLDSVTQQTSSAATGLAAGAEALST
QANDLRRTMGQFRLGSGNGSVAEAAPSLPEEAEAPARKPVRASIGSTGRARTVTAGGFDFDMGESAGGDPVDREFRRHDA
A

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=322, Percent_Identity=36.3354037267081, Blast_Score=166, Evalue=5e-42,
Organism=Escherichia coli, GI1788195, Length=313, Percent_Identity=38.3386581469649, Blast_Score=156, Evalue=3e-39,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=35.0931677018634, Blast_Score=152, Evalue=8e-38,
Organism=Escherichia coli, GI1788194, Length=289, Percent_Identity=36.3321799307958, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1789453, Length=290, Percent_Identity=32.7586206896552, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59218; Mature: 59087

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKLKLAAAFLFVFLLFTAATALTLMRLGTMDREVERMVRVEQPAAQLGVQLVNQQQRE
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLALRDHIIATEDEQRRSAEETLLAARQQRNEIYERLKPLLTDADDAALLKRLGEVMATG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TERIDRALASSKAGDTSGAARILADPSSKTSRAERTKLLSDLQDRRARNIAEAAAKADAS
HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKAQRDLILSLAIAVVLGGVAVTLIVRSISRGLDQALVLAERVAEGDLTLTTRTHARDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH
IGRLLDANNRMVMKLREMVGTITGAVNRVSSGSSSMASTSEELSQGAQEQASATAEASAS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
VEQMAANIRQTADNAGNTETVARTSADRAQASGSAVNEAVDAMQAIAERILVVQEIARQT
HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGRGFAVVAAEVRKLAERSRGAAEEISALSARTLRTASAAGEML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GQLLPDIERTSTLVSGISVASRELALGAQQVAAAIQQLDSVTQQTSSAATGLAAGAEALS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQANDLRRTMGQFRLGSGNGSVAEAAPSLPEEAEAPARKPVRASIGSTGRARTVTAGGFD
HHHHHHHHHHHHCEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCC
FDMGESAGGDPVDREFRRHDAA
CCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SIKLKLAAAFLFVFLLFTAATALTLMRLGTMDREVERMVRVEQPAAQLGVQLVNQQQRE
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLALRDHIIATEDEQRRSAEETLLAARQQRNEIYERLKPLLTDADDAALLKRLGEVMATG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TERIDRALASSKAGDTSGAARILADPSSKTSRAERTKLLSDLQDRRARNIAEAAAKADAS
HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKAQRDLILSLAIAVVLGGVAVTLIVRSISRGLDQALVLAERVAEGDLTLTTRTHARDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH
IGRLLDANNRMVMKLREMVGTITGAVNRVSSGSSSMASTSEELSQGAQEQASATAEASAS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
VEQMAANIRQTADNAGNTETVARTSADRAQASGSAVNEAVDAMQAIAERILVVQEIARQT
HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGRGFAVVAAEVRKLAERSRGAAEEISALSARTLRTASAAGEML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GQLLPDIERTSTLVSGISVASRELALGAQQVAAAIQQLDSVTQQTSSAATGLAAGAEALS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQANDLRRTMGQFRLGSGNGSVAEAAPSLPEEAEAPARKPVRASIGSTGRARTVTAGGFD
HHHHHHHHHHHHCEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCC
FDMGESAGGDPVDREFRRHDAA
CCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]