| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
Click here to switch to the map view.
The map label for this gene is yaiN [C]
Identifier: 77465120
GI number: 77465120
Start: 152398
End: 152670
Strand: Reverse
Name: yaiN [C]
Synonym: RSP_3107
Alternate gene names: 77465120
Gene position: 152670-152398 (Counterclockwise)
Preceding gene: 77465121
Following gene: 77465119
Centisome position: 16.19
GC content: 70.33
Gene sequence:
>273_bases GTGGCGCATCTGACGAAAGACAAATCGAAGACCCTCGCGCGGGTGCGGCGACTGAAGGGCCAGATCGAGGCGGTGGAGCG GGCCATCGAGGCCGAGGCGGATTGTGCCGCCCTTCTGCAGCTCGTGGCGGCCGTGCGCGGCGCGGCCGGCGGGCTCACGG CGGACCTGCTGGAGGAGCATCTCGAGCATCATGTGGCGGGCGTCGAGGATGCCGCGGCCCGCAGGCGCGGCGCCGAGGAG ATGATCGCCGCCTTCCGCACCTACATGAAGTGA
Upstream 100 bases:
>100_bases GCCGATCCTCCGGCCGCGACCGGTTGACAGCTGTCAACGGGCATTGACGCTTCGCGCAGCGCGGGATACCCATACCCCCT ATAGGTATAAGGGGGCTTGA
Downstream 100 bases:
>100_bases GGCCACCATGTCCGATCATGCCCCCCGTTCGCACGACCAGGTTCATGGTCACGACCATGACCATGTCTTCCTCGGCGCCC GCCATGCGCGCAACGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAHLTKDKSKTLARVRRLKGQIEAVERAIEAEADCAALLQLVAAVRGAAGGLTADLLEEHLEHHVAGVEDAAARRRGAEE MIAAFRTYMK
Sequences:
>Translated_90_residues MAHLTKDKSKTLARVRRLKGQIEAVERAIEAEADCAALLQLVAAVRGAAGGLTADLLEEHLEHHVAGVEDAAARRRGAEE MIAAFRTYMK >Mature_89_residues AHLTKDKSKTLARVRRLKGQIEAVERAIEAEADCAALLQLVAAVRGAAGGLTADLLEEHLEHHVAGVEDAAARRRGAEEM IAAFRTYMK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=42.3913043478261, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=32.2222222222222, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9749; Mature: 9618
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLTKDKSKTLARVRRLKGQIEAVERAIEAEADCAALLQLVAAVRGAAGGLTADLLEEH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LEHHVAGVEDAAARRRGAEEMIAAFRTYMK HHHHHCCHHHHHHHHCCHHHHHHHHHHHHC >Mature Secondary Structure AHLTKDKSKTLARVRRLKGQIEAVERAIEAEADCAALLQLVAAVRGAAGGLTADLLEEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LEHHVAGVEDAAARRRGAEEMIAAFRTYMK HHHHHCCHHHHHHHHCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA