| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465085
Identifier: 77465085
GI number: 77465085
Start: 111259
End: 112293
Strand: Reverse
Name: 77465085
Synonym: RSP_3070
Alternate gene names: NA
Gene position: 112293-111259 (Counterclockwise)
Preceding gene: 77465086
Following gene: 77465083
Centisome position: 11.91
GC content: 71.88
Gene sequence:
>1035_bases ATGTCCGAGACCGCCCCCCTGCCTGCTCCGCGCCGGATCCTGATGCTCGGCGCCACCGGCACCATCGGGCAGGCGACGGC GAGGGCGCTGCTCGCGCGCGGCCATGAGGTCGTCTGCTTTCTCCGCCCCTGCGGCACCCGTCGGCAGGCGCGCCTGCCGG ACGGCGCGGTCCTGCGCTACGGCGACGTGACCGACCCGCAGTCGCTCACCCGCGACGGCTTCTGCGGCGAGCGGTTCGAT GCGCTCGTCTCCTGCCTCGCCTCGCGGACGGGCGTGCCGCGCGACGCCTGGGCCATCGACCATGCGGCCCATTCCCACGC GCTTGCCGCCGCCCGCGCGGCGGGGGTGACGCAGGTCGTGCTCCTCTCGGCGATCTGCGTGCAGAGGCCGCTTCTCGCCT TCCAGCAGGCGAAGCTCGCCTCCGAGGAAGAGCTCATGCGCTCGGGCCTCGCCTGGTCGATCGTGCGGCCGACCGCCTTC TTCAAGTCGCTCTCGGGACAGGTGAAGCGGGTGCAGGAGGGCCGGCCCTTCCTCGTCTTCGGCGACGGCACCCTCACCGC CTGCAAGCCGATCAGCGACGACGACCTCGGGCGTTACATGGCGCTCTGCCTCGAGGATCCCGCGCTCAGGAACCGGATCC TGCCCATCGGCGGGCCGGGGCCGGCGCTGACCCCGCGGGCGCAGGCCGAGATGCTGTTCCGGCTCATGGGCCGCCCGCCG AAGATCCGTCAGGTGCCGGTGGCGCTGCTCGATGCGATCATCGCGGTTCTCTCCCTCGGAGGCCGATTGCTGCCCTCGCT CCGCGACAAGGCCGAGCTCGCCCGGATCGGGCGCTATTACGCGACCGAGTCGATGCTGGTCCTCGATCCCGCCACGGGGC GCTACGATGCGGAGGCCACGCCCTCCTTCGGCACCGAGACGCTGGAGGACTTCTACCGGCAGCTCCTCGCGGGCGAAGCG ACGGTCGATCTGGGCGAGCATGCGGTGTTCCGCGAGCGGGCCGTCACGGCAGAAGGATCGCCCGGAAATCGTTGA
Upstream 100 bases:
>100_bases CTGATCCGCCCCCTGCAGCAGCACGCGACCCTAAGTCTCCTTCCCGGCCGGCCCGCGCCTGCTAGGGTCGAGCGGCCCGC CTGCCCCGAGGAGTTCCGCC
Downstream 100 bases:
>100_bases CATTGGTGCCGGTCGGGCCGGTCACCACCTGCGCACCGGCGGCGGCGAAGAAGCTGTGGGCATCGTGTCCGGCCAGCGCC TCGGCCGGGTCGCGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NmrA-Like Family; NAD-Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Glucose/Sorbosone Dehydrogenase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3 8-Divinyl Protochlorophyllide A 8-Vinyl Reductase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSETAPLPAPRRILMLGATGTIGQATARALLARGHEVVCFLRPCGTRRQARLPDGAVLRYGDVTDPQSLTRDGFCGERFD ALVSCLASRTGVPRDAWAIDHAAHSHALAAARAAGVTQVVLLSAICVQRPLLAFQQAKLASEEELMRSGLAWSIVRPTAF FKSLSGQVKRVQEGRPFLVFGDGTLTACKPISDDDLGRYMALCLEDPALRNRILPIGGPGPALTPRAQAEMLFRLMGRPP KIRQVPVALLDAIIAVLSLGGRLLPSLRDKAELARIGRYYATESMLVLDPATGRYDAEATPSFGTETLEDFYRQLLAGEA TVDLGEHAVFRERAVTAEGSPGNR
Sequences:
>Translated_344_residues MSETAPLPAPRRILMLGATGTIGQATARALLARGHEVVCFLRPCGTRRQARLPDGAVLRYGDVTDPQSLTRDGFCGERFD ALVSCLASRTGVPRDAWAIDHAAHSHALAAARAAGVTQVVLLSAICVQRPLLAFQQAKLASEEELMRSGLAWSIVRPTAF FKSLSGQVKRVQEGRPFLVFGDGTLTACKPISDDDLGRYMALCLEDPALRNRILPIGGPGPALTPRAQAEMLFRLMGRPP KIRQVPVALLDAIIAVLSLGGRLLPSLRDKAELARIGRYYATESMLVLDPATGRYDAEATPSFGTETLEDFYRQLLAGEA TVDLGEHAVFRERAVTAEGSPGNR >Mature_343_residues SETAPLPAPRRILMLGATGTIGQATARALLARGHEVVCFLRPCGTRRQARLPDGAVLRYGDVTDPQSLTRDGFCGERFDA LVSCLASRTGVPRDAWAIDHAAHSHALAAARAAGVTQVVLLSAICVQRPLLAFQQAKLASEEELMRSGLAWSIVRPTAFF KSLSGQVKRVQEGRPFLVFGDGTLTACKPISDDDLGRYMALCLEDPALRNRILPIGGPGPALTPRAQAEMLFRLMGRPPK IRQVPVALLDAIIAVLSLGGRLLPSLRDKAELARIGRYYATESMLVLDPATGRYDAEATPSFGTETLEDFYRQLLAGEAT VDLGEHAVFRERAVTAEGSPGNR
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37066; Mature: 36935
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAPLPAPRRILMLGATGTIGQATARALLARGHEVVCFLRPCGTRRQARLPDGAVLRY CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE GDVTDPQSLTRDGFCGERFDALVSCLASRTGVPRDAWAIDHAAHSHALAAARAAGVTQVV CCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLSAICVQRPLLAFQQAKLASEEELMRSGLAWSIVRPTAFFKSLSGQVKRVQEGRPFLVF HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEE GDGTLTACKPISDDDLGRYMALCLEDPALRNRILPIGGPGPALTPRAQAEMLFRLMGRPP CCCCEEEECCCCCCHHHHHHHHHHCCHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCCCC KIRQVPVALLDAIIAVLSLGGRLLPSLRDKAELARIGRYYATESMLVLDPATGRYDAEAT CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC PSFGTETLEDFYRQLLAGEATVDLGEHAVFRERAVTAEGSPGNR CCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SETAPLPAPRRILMLGATGTIGQATARALLARGHEVVCFLRPCGTRRQARLPDGAVLRY CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE GDVTDPQSLTRDGFCGERFDALVSCLASRTGVPRDAWAIDHAAHSHALAAARAAGVTQVV CCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLSAICVQRPLLAFQQAKLASEEELMRSGLAWSIVRPTAFFKSLSGQVKRVQEGRPFLVF HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEE GDGTLTACKPISDDDLGRYMALCLEDPALRNRILPIGGPGPALTPRAQAEMLFRLMGRPP CCCCEEEECCCCCCHHHHHHHHHHCCHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCCCC KIRQVPVALLDAIIAVLSLGGRLLPSLRDKAELARIGRYYATESMLVLDPATGRYDAEAT CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC PSFGTETLEDFYRQLLAGEATVDLGEHAVFRERAVTAEGSPGNR CCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA