| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465074
Identifier: 77465074
GI number: 77465074
Start: 99471
End: 100472
Strand: Reverse
Name: 77465074
Synonym: RSP_3059
Alternate gene names: NA
Gene position: 100472-99471 (Counterclockwise)
Preceding gene: 77465083
Following gene: 77465073
Centisome position: 10.65
GC content: 68.86
Gene sequence:
>1002_bases ATGACGAAGCGCCTCGCTTCCGGTTGCCTCGCCGTATCCTTCGCAGCCCTCGCGGCTCCCGCCTGGGCGGCCGAAGACTG CGGCCGGATCAGCATCGCCGAGATGAACTGGGCCTCGGCCGGCGTCGCGGCCCAGGTCGACAAGATCATCCTCGAGGAAG GGTTCGGCTGCACGGTCGAGCTGGTGGCCGGCGACACGATGCCCACCTTCACCTCGATGAACGAAAAGGGCGAGCCCGAC ATGGCGCCCGAACTCTGGGTCAATGCCGTGCGCACCCCGCTCGAGGCGGCGGTCGAGGAGGGGCGCATGGTCGTCGCGGC GCAGATCCTGAAGGACGGCGGCGTCGAGGGCTGGTGGATCCCGCGTTACCTCGCCGAGGCCCACCCCGAGATCGACAGTG TCGAGAAGGCGCTGGAGCATCCCGATCTCTTCCCCGCCCCCGAGGATGCTTCGCGCGGCGCCGTCCACAACTGCCCCTCG GGCTGGAACTGCCAGGTCTCGACCGAGAACCTGTTCCGGGCGCTCGGCGCCGAAGACCACGGCTTCGATCTCGTGGACAC GGGCTCGGCCGCGGGGCTCGACGGCTCGATCGCCAATGCCTACGAGCGCGAGGCGGGCTGGCTCGGCTATTACTGGGCGC CGACGGCGATCCTCGGCAAATACGACATGGTGCGCCTGCCCTTCTCGGTGCCGCACGACAAGGCCGCCTGGGATGCCTGC ACCGCGGTGCCGGACTGCGCCGATCCCGAGGTGAACTCCTATCCGGTGTCCGAGGTCTTCACCGCCGTCACGCCCTCCTT CGCCGAGAAGGCCGGTGTGGCCATGGACTATGTGAAGGCCCGCAGCTGGAGCAACGAGACGGTGGGCCAGATTCTCGCCT GGATGGACGAGAGCCAGGCCACCAACGAGGATGCGGCCTACCATTTCCTCGAGACCTATCCCGACCTCTGGCGCGCCTGG CTTCCGGCCGACGTGGCCGACCGGGTCGCCGCGGCGCTCTGA
Upstream 100 bases:
>100_bases TTCCGGTGCATCGAGCGGGCTCAGACAATCCACAGGATTTCCGGTGTCCGCGGCACGCCGGCGATCGTCTCATGCGTGCC GCAATGACAGGAGAACGTCC
Downstream 100 bases:
>100_bases CCGCCCGACCCGAAGCCGGGCAGTCCCTGCCCGGCTTCGTTCATTGACCTTACCCGAGAGGAACAGGATGGCCTCCGCCT GCTGGAGCTTGCCCGAAGCC
Product: ABC proline/glycine betaine transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTKRLASGCLAVSFAALAAPAWAAEDCGRISIAEMNWASAGVAAQVDKIILEEGFGCTVELVAGDTMPTFTSMNEKGEPD MAPELWVNAVRTPLEAAVEEGRMVVAAQILKDGGVEGWWIPRYLAEAHPEIDSVEKALEHPDLFPAPEDASRGAVHNCPS GWNCQVSTENLFRALGAEDHGFDLVDTGSAAGLDGSIANAYEREAGWLGYYWAPTAILGKYDMVRLPFSVPHDKAAWDAC TAVPDCADPEVNSYPVSEVFTAVTPSFAEKAGVAMDYVKARSWSNETVGQILAWMDESQATNEDAAYHFLETYPDLWRAW LPADVADRVAAAL
Sequences:
>Translated_333_residues MTKRLASGCLAVSFAALAAPAWAAEDCGRISIAEMNWASAGVAAQVDKIILEEGFGCTVELVAGDTMPTFTSMNEKGEPD MAPELWVNAVRTPLEAAVEEGRMVVAAQILKDGGVEGWWIPRYLAEAHPEIDSVEKALEHPDLFPAPEDASRGAVHNCPS GWNCQVSTENLFRALGAEDHGFDLVDTGSAAGLDGSIANAYEREAGWLGYYWAPTAILGKYDMVRLPFSVPHDKAAWDAC TAVPDCADPEVNSYPVSEVFTAVTPSFAEKAGVAMDYVKARSWSNETVGQILAWMDESQATNEDAAYHFLETYPDLWRAW LPADVADRVAAAL >Mature_332_residues TKRLASGCLAVSFAALAAPAWAAEDCGRISIAEMNWASAGVAAQVDKIILEEGFGCTVELVAGDTMPTFTSMNEKGEPDM APELWVNAVRTPLEAAVEEGRMVVAAQILKDGGVEGWWIPRYLAEAHPEIDSVEKALEHPDLFPAPEDASRGAVHNCPSG WNCQVSTENLFRALGAEDHGFDLVDTGSAAGLDGSIANAYEREAGWLGYYWAPTAILGKYDMVRLPFSVPHDKAAWDACT AVPDCADPEVNSYPVSEVFTAVTPSFAEKAGVAMDYVKARSWSNETVGQILAWMDESQATNEDAAYHFLETYPDLWRAWL PADVADRVAAAL
Specific function: Unknown
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35906; Mature: 35775
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLASGCLAVSFAALAAPAWAAEDCGRISIAEMNWASAGVAAQVDKIILEEGFGCTVE CCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE LVAGDTMPTFTSMNEKGEPDMAPELWVNAVRTPLEAAVEEGRMVVAAQILKDGGVEGWWI EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEH PRYLAEAHPEIDSVEKALEHPDLFPAPEDASRGAVHNCPSGWNCQVSTENLFRALGAEDH HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCC GFDLVDTGSAAGLDGSIANAYEREAGWLGYYWAPTAILGKYDMVRLPFSVPHDKAAWDAC CCCEEECCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCEEECCCCCCCCHHHHHHH TAVPDCADPEVNSYPVSEVFTAVTPSFAEKAGVAMDYVKARSWSNETVGQILAWMDESQA HCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCC TNEDAAYHFLETYPDLWRAWLPADVADRVAAAL CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TKRLASGCLAVSFAALAAPAWAAEDCGRISIAEMNWASAGVAAQVDKIILEEGFGCTVE CCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE LVAGDTMPTFTSMNEKGEPDMAPELWVNAVRTPLEAAVEEGRMVVAAQILKDGGVEGWWI EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCEEH PRYLAEAHPEIDSVEKALEHPDLFPAPEDASRGAVHNCPSGWNCQVSTENLFRALGAEDH HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCC GFDLVDTGSAAGLDGSIANAYEREAGWLGYYWAPTAILGKYDMVRLPFSVPHDKAAWDAC CCCEEECCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCEEECCCCCCCCHHHHHHH TAVPDCADPEVNSYPVSEVFTAVTPSFAEKAGVAMDYVKARSWSNETVGQILAWMDESQA HCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCC TNEDAAYHFLETYPDLWRAWLPADVADRVAAAL CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA