| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
Click here to switch to the map view.
The map label for this gene is dorS [H]
Identifier: 77465058
GI number: 77465058
Start: 78236
End: 80677
Strand: Direct
Name: dorS [H]
Synonym: RSP_3044
Alternate gene names: 77465058
Gene position: 78236-80677 (Clockwise)
Preceding gene: 77465057
Following gene: 77465060
Centisome position: 8.3
GC content: 68.43
Gene sequence:
>2442_bases ATGATAGCCGAGAAGTCGGAGCGGTTCTTCCCCTTTGCGGTCAGTGCGGAACTTGCGCCCGTGGGCGTCTCGGCGGCCGA ACGGAGCGCGCTTGCCGACTATCTGGAGTCGAGCGAGACCCTTCTGACCGAACGCGTTGTCGCCTACGCCAGCACCCGCA GCTACAGCCACCTCGTCTCGACGCTGCCCGAGGCCTGGCGCTCGTCCGTTCAGGGGCTGACGGACTCCGTCATCCTCATG CTCGACCACCAGTCGGCCGAAGCCGCCATCGACTATGACGCAGATATCGGCACCGATCCCAGCACCGCCTATGGCATCGA GGCCGGTCTCCGCCACCGCCTGCGGGGCATCTCGCTCGAGACCTTCATCGGCGCCTTCAAGGGCTATCGCGATGTCTATC TGAATGTCACCGCCGAGGCGCGGGTTCCCGCCGCGATGCGCGAGGGCTGGTTGCGCCTCCTGCGGGGTTTCTTCGACCGG GCCGAGATTGGGATCTGCGCCCATTGGAGCGGCGAGCTGGGCACTCTCGATCACGACCAGCTGCTCTCGGTGAACCGGGC GCTCGTCAACGAGAAGAACAAGTATCTGACCATCTTCGAAAGCATGAACAATCCGGTGCTGCTGGTGGATGACGGCGGGC GCATCGAGAACATGAACTTCGCCGCCGCGCGTCTCTTCCTGCAGGATGCCCTGCCGGGCTCGGTCTATTACGGGCCGGAG GCGAACCTCAGGTTCGCCGATCTCGCGGGTTTCGACCTCGAGGCGGTGAAGCTGCGCGGCGAGGCGGGCGATGTGCTGAC CTGCATCGGCGAGCGCTGGTACTCGATCACGGCGCAGGAGATGCTGGACGTCAGCCGCAAGTTCGTGGGCATCGTGGTCA CCTTCCACGACGTGACCGAAGCGCGGCGGGCGCGCGAACAGGCCGAGGCGCTGGCCCGCGCCAAGACCGACTTCCTCGCC ACGATGAGCCACGAGATCCGCACCCCGATCCACAGCATCGGGGGGGTCACCGAACTTCTCAAGCAGTCCGAGCTTGCCTC CCGCGACCGCGGCTATGTTGATGCGATCGAGCGGTCGACCGAGGTGCTCGCCTCGATCGTGAGCGACGTGCTCGATTACG CGCGGATCGAGTCCGGGCTGGTCGAGCTCGAGCAGGTGGATTTCTCGATCGACCAGATCCTCGACGATGTGGCGCGGATG ATGCAGCCGCTGGTGCGCCGCAAGCCGCAGCTTCGCATCGTGATCGAGCGGACGGACCTGCCGCCGGTCCTGGGAGATGC AGGCAAGCTGCGGCAGATCCTCATCAATCTCACGAGCAACGCGGTGAAGTTCACCCCGGAGGGAACCGTTGTGATCGGGG CCGAGCGCCTCGCCGGCGGCCATCGCTTCCGCTTCACCGTGAGCGATACCGGGCCGGGCATCGCGGCCGAGAAGCTCGAG GAGATCTTCAAACCCTATATCCAGTCCGACAGCTCGATCTCGCGCCGCCACGGCGGCACCGGCCTCGGTCTCGCGATCTG CCGGAGGCTCGCCGGACATCTGGGGGGGCGCCTCGACGTGCGCAGCACGCCCGGCTTCGGCAGCCGCTTCACGCTGGAAG TGGCGCTCGCTCCGGGCGGGAGCGAGCCCCCGGGCGATGCGACGGCCGACGCGCCTCCGCCGGCACGGGCGCTGGATCTG CTGGTGGTCGAGGATGACGAGGTGAATGCGCTGGTGGCGCAGAGCCTGCTCTCGGCTGCCGGCCACGGCGTCCGGGTCGC CGGCACCGGCGAGGCGGCGCTCGTCGCCCTCGGCGAGCACCGCTTCGACCTCGTGCTGACGGACCTCAACCTGCCGGACA TGGACGGGCTGGAGCTGGCCCGCACGATCCGCCGCCACGCCGACAGGCACACGGCGGAGCTGCCGTTGGTGGCGCTCTCC GCGCATGGCCCGGGTGTGGATCCGGCGGCGCTGACCGAGGCGGGGATCGACGCCTTCCTGGGCAAACCCTTCCATTTCGC GCGTCTTGAAGAGATCCTCTCCCGTCTGGTCGGAAGTTCCTCGCCCACGCCGCTGGGCAAGGCCGCGCCGGCCCGGCGCG CCTTGCAGTCGGTGGATCTCTGCGTGCTGCGGGGTCATGCCGAGGCGCTGGGACGTACCTCTGCCGCACGGATCGTCCAG ACCTTCCGGCAGAGCGTGCTCGAGACGGCCCGTGCGCTGGAACTGGCGATGGATGAGGCCGACATGCGGTCCGTGACGTC TCTGGCCCACCGGCTGAAGGGGGCGGCGCGGCATCTGGGCTTCAGGGGTCTCTCCGACAAGGCAGAGCAGGTCGAGACCG CGGCCGCGGCGGACGGCTGCGAGGCCGCTCTGGTGCTCGAGCTGGTCTCCGACTGCCGCGCCGCTCCGGCGCTGGCCGAT CTCGCCTGGGCCGAAGCCAGTGCCGGAGTGGCCGAGAGCTGA
Upstream 100 bases:
>100_bases AGGCGGCGGATCATGGAGATGGACGTGCCGGGCGCGCGGAACGGGCAAGGGGCTCGCGCCCCGGAGCCCCACTTCATGCG CCTTGGAAGGAGTTTGGTCG
Downstream 100 bases:
>100_bases GGCGGTCTCTTCCGGCGTCAGGCCTGGAAGACGTAGCCGATGCCGTGAACGGTCACGATCAGCCGCGGGTCGGAAGGGTC CGCCTCGATCTTGCGGCGGA
Product: DMSO/TMAO-sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MIAEKSERFFPFAVSAELAPVGVSAAERSALADYLESSETLLTERVVAYASTRSYSHLVSTLPEAWRSSVQGLTDSVILM LDHQSAEAAIDYDADIGTDPSTAYGIEAGLRHRLRGISLETFIGAFKGYRDVYLNVTAEARVPAAMREGWLRLLRGFFDR AEIGICAHWSGELGTLDHDQLLSVNRALVNEKNKYLTIFESMNNPVLLVDDGGRIENMNFAAARLFLQDALPGSVYYGPE ANLRFADLAGFDLEAVKLRGEAGDVLTCIGERWYSITAQEMLDVSRKFVGIVVTFHDVTEARRAREQAEALARAKTDFLA TMSHEIRTPIHSIGGVTELLKQSELASRDRGYVDAIERSTEVLASIVSDVLDYARIESGLVELEQVDFSIDQILDDVARM MQPLVRRKPQLRIVIERTDLPPVLGDAGKLRQILINLTSNAVKFTPEGTVVIGAERLAGGHRFRFTVSDTGPGIAAEKLE EIFKPYIQSDSSISRRHGGTGLGLAICRRLAGHLGGRLDVRSTPGFGSRFTLEVALAPGGSEPPGDATADAPPPARALDL LVVEDDEVNALVAQSLLSAAGHGVRVAGTGEAALVALGEHRFDLVLTDLNLPDMDGLELARTIRRHADRHTAELPLVALS AHGPGVDPAALTEAGIDAFLGKPFHFARLEEILSRLVGSSSPTPLGKAAPARRALQSVDLCVLRGHAEALGRTSAARIVQ TFRQSVLETARALELAMDEADMRSVTSLAHRLKGAARHLGFRGLSDKAEQVETAAAADGCEAALVLELVSDCRAAPALAD LAWAEASAGVAES
Sequences:
>Translated_813_residues MIAEKSERFFPFAVSAELAPVGVSAAERSALADYLESSETLLTERVVAYASTRSYSHLVSTLPEAWRSSVQGLTDSVILM LDHQSAEAAIDYDADIGTDPSTAYGIEAGLRHRLRGISLETFIGAFKGYRDVYLNVTAEARVPAAMREGWLRLLRGFFDR AEIGICAHWSGELGTLDHDQLLSVNRALVNEKNKYLTIFESMNNPVLLVDDGGRIENMNFAAARLFLQDALPGSVYYGPE ANLRFADLAGFDLEAVKLRGEAGDVLTCIGERWYSITAQEMLDVSRKFVGIVVTFHDVTEARRAREQAEALARAKTDFLA TMSHEIRTPIHSIGGVTELLKQSELASRDRGYVDAIERSTEVLASIVSDVLDYARIESGLVELEQVDFSIDQILDDVARM MQPLVRRKPQLRIVIERTDLPPVLGDAGKLRQILINLTSNAVKFTPEGTVVIGAERLAGGHRFRFTVSDTGPGIAAEKLE EIFKPYIQSDSSISRRHGGTGLGLAICRRLAGHLGGRLDVRSTPGFGSRFTLEVALAPGGSEPPGDATADAPPPARALDL LVVEDDEVNALVAQSLLSAAGHGVRVAGTGEAALVALGEHRFDLVLTDLNLPDMDGLELARTIRRHADRHTAELPLVALS AHGPGVDPAALTEAGIDAFLGKPFHFARLEEILSRLVGSSSPTPLGKAAPARRALQSVDLCVLRGHAEALGRTSAARIVQ TFRQSVLETARALELAMDEADMRSVTSLAHRLKGAARHLGFRGLSDKAEQVETAAAADGCEAALVLELVSDCRAAPALAD LAWAEASAGVAES >Mature_813_residues MIAEKSERFFPFAVSAELAPVGVSAAERSALADYLESSETLLTERVVAYASTRSYSHLVSTLPEAWRSSVQGLTDSVILM LDHQSAEAAIDYDADIGTDPSTAYGIEAGLRHRLRGISLETFIGAFKGYRDVYLNVTAEARVPAAMREGWLRLLRGFFDR AEIGICAHWSGELGTLDHDQLLSVNRALVNEKNKYLTIFESMNNPVLLVDDGGRIENMNFAAARLFLQDALPGSVYYGPE ANLRFADLAGFDLEAVKLRGEAGDVLTCIGERWYSITAQEMLDVSRKFVGIVVTFHDVTEARRAREQAEALARAKTDFLA TMSHEIRTPIHSIGGVTELLKQSELASRDRGYVDAIERSTEVLASIVSDVLDYARIESGLVELEQVDFSIDQILDDVARM MQPLVRRKPQLRIVIERTDLPPVLGDAGKLRQILINLTSNAVKFTPEGTVVIGAERLAGGHRFRFTVSDTGPGIAAEKLE EIFKPYIQSDSSISRRHGGTGLGLAICRRLAGHLGGRLDVRSTPGFGSRFTLEVALAPGGSEPPGDATADAPPPARALDL LVVEDDEVNALVAQSLLSAAGHGVRVAGTGEAALVALGEHRFDLVLTDLNLPDMDGLELARTIRRHADRHTAELPLVALS AHGPGVDPAALTEAGIDAFLGKPFHFARLEEILSRLVGSSSPTPLGKAAPARRALQSVDLCVLRGHAEALGRTSAARIVQ TFRQSVLETARALELAMDEADMRSVTSLAHRLKGAARHLGFRGLSDKAEQVETAAAADGCEAALVLELVSDCRAAPALAD LAWAEASAGVAES
Specific function: Member of the two-component regulatory system ArcB/ArcA. Sensor-regulator protein for anaerobic repression of the arc modulon. Activates ArcA via a four-step phosphorelay. ArcB can also dephosphorylate ArcA by a reverse phosphorelay involving His- 717 and
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=484, Percent_Identity=34.504132231405, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI1788713, Length=622, Percent_Identity=27.491961414791, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI87081816, Length=480, Percent_Identity=31.4583333333333, Blast_Score=196, Evalue=6e-51, Organism=Escherichia coli, GI1789149, Length=237, Percent_Identity=37.9746835443038, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=38.3620689655172, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=32.034632034632, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1788549, Length=275, Percent_Identity=26.5454545454545, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=25.5411255411255, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1790300, Length=356, Percent_Identity=26.685393258427, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786783, Length=236, Percent_Identity=30.0847457627119, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1787894, Length=231, Percent_Identity=27.7056277056277, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=26.7241379310345, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790551, Length=202, Percent_Identity=31.1881188118812, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=27.9166666666667, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1787375, Length=120, Percent_Identity=37.5, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=35.2459016393443, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=70, Percent_Identity=48.5714285714286, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR014409 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 87537; Mature: 87537
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEKSERFFPFAVSAELAPVGVSAAERSALADYLESSETLLTERVVAYASTRSYSHLVS CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLPEAWRSSVQGLTDSVILMLDHQSAEAAIDYDADIGTDPSTAYGIEAGLRHRLRGISLE HHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHH TFIGAFKGYRDVYLNVTAEARVPAAMREGWLRLLRGFFDRAEIGICAHWSGELGTLDHDQ HHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH LLSVNRALVNEKNKYLTIFESMNNPVLLVDDGGRIENMNFAAARLFLQDALPGSVYYGPE HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCEEECCC ANLRFADLAGFDLEAVKLRGEAGDVLTCIGERWYSITAQEMLDVSRKFVGIVVTFHDVTE CCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHH ARRAREQAEALARAKTDFLATMSHEIRTPIHSIGGVTELLKQSELASRDRGYVDAIERST HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EVLASIVSDVLDYARIESGLVELEQVDFSIDQILDDVARMMQPLVRRKPQLRIVIERTDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC PPVLGDAGKLRQILINLTSNAVKFTPEGTVVIGAERLAGGHRFRFTVSDTGPGIAAEKLE CCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHCCCCEEEEEECCCCCCHHHHHHH EIFKPYIQSDSSISRRHGGTGLGLAICRRLAGHLGGRLDVRSTPGFGSRFTLEVALAPGG HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCC SEPPGDATADAPPPARALDLLVVEDDEVNALVAQSLLSAAGHGVRVAGTGEAALVALGEH CCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCC RFDLVLTDLNLPDMDGLELARTIRRHADRHTAELPLVALSAHGPGVDPAALTEAGIDAFL CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH GKPFHFARLEEILSRLVGSSSPTPLGKAAPARRALQSVDLCVLRGHAEALGRTSAARIVQ CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHCCHHHHHHHH TFRQSVLETARALELAMDEADMRSVTSLAHRLKGAARHLGFRGLSDKAEQVETAAAADGC HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC EAALVLELVSDCRAAPALADLAWAEASAGVAES HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIAEKSERFFPFAVSAELAPVGVSAAERSALADYLESSETLLTERVVAYASTRSYSHLVS CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLPEAWRSSVQGLTDSVILMLDHQSAEAAIDYDADIGTDPSTAYGIEAGLRHRLRGISLE HHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHH TFIGAFKGYRDVYLNVTAEARVPAAMREGWLRLLRGFFDRAEIGICAHWSGELGTLDHDQ HHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH LLSVNRALVNEKNKYLTIFESMNNPVLLVDDGGRIENMNFAAARLFLQDALPGSVYYGPE HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCEEECCC ANLRFADLAGFDLEAVKLRGEAGDVLTCIGERWYSITAQEMLDVSRKFVGIVVTFHDVTE CCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHH ARRAREQAEALARAKTDFLATMSHEIRTPIHSIGGVTELLKQSELASRDRGYVDAIERST HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EVLASIVSDVLDYARIESGLVELEQVDFSIDQILDDVARMMQPLVRRKPQLRIVIERTDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC PPVLGDAGKLRQILINLTSNAVKFTPEGTVVIGAERLAGGHRFRFTVSDTGPGIAAEKLE CCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHCCCCEEEEEECCCCCCHHHHHHH EIFKPYIQSDSSISRRHGGTGLGLAICRRLAGHLGGRLDVRSTPGFGSRFTLEVALAPGG HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCC SEPPGDATADAPPPARALDLLVVEDDEVNALVAQSLLSAAGHGVRVAGTGEAALVALGEH CCCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCC RFDLVLTDLNLPDMDGLELARTIRRHADRHTAELPLVALSAHGPGVDPAALTEAGIDAFL CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH GKPFHFARLEEILSRLVGSSSPTPLGKAAPARRALQSVDLCVLRGHAEALGRTSAARIVQ CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHCCHHHHHHHH TFRQSVLETARALELAMDEADMRSVTSLAHRLKGAARHLGFRGLSDKAEQVETAAAADGC HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC EAALVLELVSDCRAAPALADLAWAEASAGVAES HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]