Click here to switch to the map view.

The map label for this gene is dorX [C]

Identifier: 77465055

GI number: 77465055

Start: 76617

End: 77390

Strand: Direct

Name: dorX [C]

Synonym: RSP_3042

Alternate gene names: 77465055

Gene position: 76617-77390 (Clockwise)

Preceding gene: 77465049

Following gene: 77465056

Centisome position: 8.12

GC content: 64.73

Gene sequence:

>774_bases
ATGTCATCGCCAGCCATGCCAGAGGTTTCCGCAGCCGCGCTGGTCGGCGCCGTGATCGATGCGATCGGCACGGAAGGATT
CTGCCCCGCCCTGACAGCCTGGCTTCAGACCGTCGCGCCCTATTCCTTCACCGTGGTCTTCGGCTATCGCGGAGAGGCGA
AACCCATTGATCTCTATGACGATTTCCCCAGCCATCGCCGCAAGGTCTTCGTGACGGACTATCTCGAAGGGCCTTATCTG
CTCGACCCCTTCTGTCAGGGGGCGATCCGTCCCGTGGAGCCGGGTTTCCACCGGCTCAGGAGCCTCGCGCCGGACCGGTT
CTATCAGGGAGAATATTTCCGGAGCTATTACATGCGGACGGAGATCGCCGAAGAAATAGGCTGCTTTGCCGAAATGCCGG
GCGATTGCCATGTGGTCTTCTCGCTGATGCGCGAGGAGAAGCCGTTCTCCGCGCCGGAATTCCGCAAGCTCACCGGGGTG
GCGCCGATCGTGACGGCGCTGATGCGGCGGCACTGGGCGGATCTCTCCCGGGAATTCGCGACGCGGTCCACGCCCCGTCC
GGCGCTGACAGGCGACGGGCTGGACCGGCTGACCCCGCGCGAGCGCGAGATCACCGGCTGGATCCTCAAGGGCTACTCCG
CCGAGGCGACCGGCCAGGAACTGGGCATCGCCTCCGGCACGGTCCGGATCCACCGTCGCAACATCTACGCGAAACTGGGC
ATATCCTCGCAGCGCGAGCTCTTCGCGCGCTTTCTGGCGGGGATCTCACCGTAG

Upstream 100 bases:

>100_bases
GACTCTGCATGCGGTGCCCGACCATCTATTGCATGTATCTGGGTAAAGCGTAGAAAAACGGCCAAAGGCTGTATATATCA
CAAAGGGCATAGATCGCGTC

Downstream 100 bases:

>100_bases
CGATCTTCCGGAGCGGCCGATCCGGCGAACCACGCGATGGGCGGGAAGCGGTCTGATGCATGATGGGGGCTGCGCCGCGG
TCGGGCGCGCTGCCTCACCT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYRGEAKPIDLYDDFPSHRRKVFVTDYLEGPYL
LDPFCQGAIRPVEPGFHRLRSLAPDRFYQGEYFRSYYMRTEIAEEIGCFAEMPGDCHVVFSLMREEKPFSAPEFRKLTGV
APIVTALMRRHWADLSREFATRSTPRPALTGDGLDRLTPREREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLG
ISSQRELFARFLAGISP

Sequences:

>Translated_257_residues
MSSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYRGEAKPIDLYDDFPSHRRKVFVTDYLEGPYL
LDPFCQGAIRPVEPGFHRLRSLAPDRFYQGEYFRSYYMRTEIAEEIGCFAEMPGDCHVVFSLMREEKPFSAPEFRKLTGV
APIVTALMRRHWADLSREFATRSTPRPALTGDGLDRLTPREREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLG
ISSQRELFARFLAGISP
>Mature_256_residues
SSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYRGEAKPIDLYDDFPSHRRKVFVTDYLEGPYLL
DPFCQGAIRPVEPGFHRLRSLAPDRFYQGEYFRSYYMRTEIAEEIGCFAEMPGDCHVVFSLMREEKPFSAPEFRKLTGVA
PIVTALMRRHWADLSREFATRSTPRPALTGDGLDRLTPREREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLGI
SSQRELFARFLAGISP

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28753; Mature: 28622

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYRGEAKPIDLYD
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHC
DFPSHRRKVFVTDYLEGPYLLDPFCQGAIRPVEPGFHRLRSLAPDRFYQGEYFRSYYMRT
CCCCCCCEEEEEECCCCCEEECHHHCCCCCCCCHHHHHHHHCCCCHHHCHHHHHHHHHHH
EIAEEIGCFAEMPGDCHVVFSLMREEKPFSAPEFRKLTGVAPIVTALMRRHWADLSREFA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
TRSTPRPALTGDGLDRLTPREREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLG
HCCCCCCCCCCCCCHHCCCCCHHHHHHEEECCCCCCCCHHCCCCCCEEEEEECCEEEECC
ISSQRELFARFLAGISP
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYRGEAKPIDLYD
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHC
DFPSHRRKVFVTDYLEGPYLLDPFCQGAIRPVEPGFHRLRSLAPDRFYQGEYFRSYYMRT
CCCCCCCEEEEEECCCCCEEECHHHCCCCCCCCHHHHHHHHCCCCHHHCHHHHHHHHHHH
EIAEEIGCFAEMPGDCHVVFSLMREEKPFSAPEFRKLTGVAPIVTALMRRHWADLSREFA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
TRSTPRPALTGDGLDRLTPREREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLG
HCCCCCCCCCCCCCHHCCCCCHHHHHHEEECCCCCCCCHHCCCCCCEEEEEECCEEEECC
ISSQRELFARFLAGISP
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7789814 [H]