| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is cocE [H]
Identifier: 77465049
GI number: 77465049
Start: 69625
End: 71628
Strand: Direct
Name: cocE [H]
Synonym: RSP_3036
Alternate gene names: 77465049
Gene position: 69625-71628 (Clockwise)
Preceding gene: 77465048
Following gene: 77465055
Centisome position: 7.38
GC content: 67.81
Gene sequence:
>2004_bases ATGCAGAACTATTCCGTCAGCGTCACCAGTGACAGGCCGGCGCCCTTCCAGCAGATCACCATCCCGCTGGCCGATGGCAC GGTGCTGCACGCCCGGCTGTGGCTGCCGCAGACGCCGCTGGCCGACAGGGTGCCGCTGGTCCTCGAATGGATCCCCTATC GCCAGAGCGACGGCACCGCGCTGGCCGACAGCATGATGCATGGCTACTTCGCCGAACAGGGCATCGCCGCCGCCCGCGTC GACATCCGCGGATCGGGCAATTCCGACGGACTTCTGCACGACGAATATCTGAAACAGGAACAGGATGACGCCTGCGAGGT CATCGCCTGGTTCGCTCGGCAGGACTGGTGCAACGGCAATGTCGGGCTGATCGGCATTTCCTGGGGCGGTTTCGCCGGGC TGCAGATCGCGGCGCGCCGGCCGCCGGCGCTGAAATGCATCATTACCGCCTGTTCCACCGACAACCGCTATACCGATGAC GTCCACTACATGGGCGGCGCCCTTCTGTCGGACGGCATGCAATGGGGCAGCGGCCTGTTCGCGCAGCTGGGCCGGCCCGC CGATCCCAAGCATGTGGGCGACCGCTGGCGCGAGATGTGGATGAACCGGCTGGAAGGCATCAAGGAGCCGCCGCTGGCCA CCTGGATGCAGCACACGACCTACGACGACTTCTGGAAGCACGGGTCGGTCTGCGAGGATTACGACGAGATCCAATGCGCG GTCTGGGCAGTCGGCGGCTGGGTCGACGGCTATACCGACCCGATCCTGCGGCTGATGGAGAAGCTCAGCGTCCCGAAGAA GGCGCTGATCGGGCCCTGGACGCATATGTATCCGACCTGGGGCCAGCCCGGCCCGCAGATCGGCTTCCTGCAGGAGGCGA TGCGCTGGTGGCGCCACTGGCTGATGGACGAGGACACCGGCATCATGGACGAGCCGCAGCTGACCCTGTGGCTGGGCAAG GATCCGAAGCCCGACACCCGCGCGCCGGATATCGGCGGCCGCTGGATCGGCCTGCCGGCCTGGCCGCCTGCCGCGCCGGC ACAGACGCTCTTTGCCGACGATCGCCGCCTGGCCTCCGCGCCGGGGCCGGTCGAGCCAGAGATCGTCGTCGACAGTCCGC TGTCGCTCGGCACCCAGGGGGGCGAATGGTGCCCGCTGGATGGCGGCGGCAACGGCCCGGAATTCGCCGGCGATGCGCGG ATGGATGACGGCATGTCGCTCTGCTTCGACACCACTCCGCTGGCCGAGGCCTTCCATCTGGTCGGCATGCCGGTGCTGCG CCTGCGGCTCGCGTTCGAGGGCGACCATGCGCTGATCGTCCTGCGTCTGAACGAGGTCTGGCCGGACGGACTGTCGGGCC GCGTCACCTATGGCATTCGCCGCCTTGCCCGCCCCGAAGGCGTCGCGCCGGGCGAGATGCACGAGGTGGAACTGCCGCTG AAGGGCGTCGCGCATGAATTCAGCCCGGGCCGCCGCATCCGGCTGGCGATCTCGACCAGCTACTGGCCGCTGGTCTGGCC GGAACCGCGGCTGAACGCGATCACCCTCGATCCCGCCTCGCTGCGGTTCGATCTGCCGGGCATGCCGCCCGAGGCCAGCC ATGACCAGCCGGCCTTCGGCCCGGCGATCCACGCCTGCCCAGTGCCCTCGCAGGTGCTGGTCCCGGGCGAGATCAGCCGC AAGGTCCATCAGGATCTGGCCGGCGGCAAGGTCGAGCTGGTCTCGACCTCGCACCGCGCGACATGGGAACTGGGCGGTCT GGTCATGGGCGGCTATGGCGGCCACAGCTATTCCGTCATGCCCGATGACGGCGCATCGGCCCGGGCACGCTTCTTCTCGG TTCAGACCTACGAGCGCGAGGCCCTGGGCTGGAAGATCCGCCTTGAATCGAGCTCGGAAGTCAGCTGGCAGGACGGCCGC ATGGTCCTTGCCTCGCACTACGAGGCCTTCGAGGGCGATGAGAAGGTCTTTGCCCGCAACTGGCTGCATCGGATCGATTA TTGA
Upstream 100 bases:
>100_bases GGTATCCCGGCCCCGACCTCATGGCCGCCGATCCTGACCCCTCTTCCGCGTCGCGGGCCTGAGTTCCCTCCACGCCCGCG CCTCCTGAAAGGACCCCGAT
Downstream 100 bases:
>100_bases CCCGATGGCCGCCGCCGGAACAGGGGCGGCGGCCATGGTTCGTGCCCCGGGATGGCGCGCTCCGACCGATCACGCCCGGC GATCTGCGTCGTGACCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 667; Mature: 667
Protein sequence:
>667_residues MQNYSVSVTSDRPAPFQQITIPLADGTVLHARLWLPQTPLADRVPLVLEWIPYRQSDGTALADSMMHGYFAEQGIAAARV DIRGSGNSDGLLHDEYLKQEQDDACEVIAWFARQDWCNGNVGLIGISWGGFAGLQIAARRPPALKCIITACSTDNRYTDD VHYMGGALLSDGMQWGSGLFAQLGRPADPKHVGDRWREMWMNRLEGIKEPPLATWMQHTTYDDFWKHGSVCEDYDEIQCA VWAVGGWVDGYTDPILRLMEKLSVPKKALIGPWTHMYPTWGQPGPQIGFLQEAMRWWRHWLMDEDTGIMDEPQLTLWLGK DPKPDTRAPDIGGRWIGLPAWPPAAPAQTLFADDRRLASAPGPVEPEIVVDSPLSLGTQGGEWCPLDGGGNGPEFAGDAR MDDGMSLCFDTTPLAEAFHLVGMPVLRLRLAFEGDHALIVLRLNEVWPDGLSGRVTYGIRRLARPEGVAPGEMHEVELPL KGVAHEFSPGRRIRLAISTSYWPLVWPEPRLNAITLDPASLRFDLPGMPPEASHDQPAFGPAIHACPVPSQVLVPGEISR KVHQDLAGGKVELVSTSHRATWELGGLVMGGYGGHSYSVMPDDGASARARFFSVQTYEREALGWKIRLESSSEVSWQDGR MVLASHYEAFEGDEKVFARNWLHRIDY
Sequences:
>Translated_667_residues MQNYSVSVTSDRPAPFQQITIPLADGTVLHARLWLPQTPLADRVPLVLEWIPYRQSDGTALADSMMHGYFAEQGIAAARV DIRGSGNSDGLLHDEYLKQEQDDACEVIAWFARQDWCNGNVGLIGISWGGFAGLQIAARRPPALKCIITACSTDNRYTDD VHYMGGALLSDGMQWGSGLFAQLGRPADPKHVGDRWREMWMNRLEGIKEPPLATWMQHTTYDDFWKHGSVCEDYDEIQCA VWAVGGWVDGYTDPILRLMEKLSVPKKALIGPWTHMYPTWGQPGPQIGFLQEAMRWWRHWLMDEDTGIMDEPQLTLWLGK DPKPDTRAPDIGGRWIGLPAWPPAAPAQTLFADDRRLASAPGPVEPEIVVDSPLSLGTQGGEWCPLDGGGNGPEFAGDAR MDDGMSLCFDTTPLAEAFHLVGMPVLRLRLAFEGDHALIVLRLNEVWPDGLSGRVTYGIRRLARPEGVAPGEMHEVELPL KGVAHEFSPGRRIRLAISTSYWPLVWPEPRLNAITLDPASLRFDLPGMPPEASHDQPAFGPAIHACPVPSQVLVPGEISR KVHQDLAGGKVELVSTSHRATWELGGLVMGGYGGHSYSVMPDDGASARARFFSVQTYEREALGWKIRLESSSEVSWQDGR MVLASHYEAFEGDEKVFARNWLHRIDY >Mature_667_residues MQNYSVSVTSDRPAPFQQITIPLADGTVLHARLWLPQTPLADRVPLVLEWIPYRQSDGTALADSMMHGYFAEQGIAAARV DIRGSGNSDGLLHDEYLKQEQDDACEVIAWFARQDWCNGNVGLIGISWGGFAGLQIAARRPPALKCIITACSTDNRYTDD VHYMGGALLSDGMQWGSGLFAQLGRPADPKHVGDRWREMWMNRLEGIKEPPLATWMQHTTYDDFWKHGSVCEDYDEIQCA VWAVGGWVDGYTDPILRLMEKLSVPKKALIGPWTHMYPTWGQPGPQIGFLQEAMRWWRHWLMDEDTGIMDEPQLTLWLGK DPKPDTRAPDIGGRWIGLPAWPPAAPAQTLFADDRRLASAPGPVEPEIVVDSPLSLGTQGGEWCPLDGGGNGPEFAGDAR MDDGMSLCFDTTPLAEAFHLVGMPVLRLRLAFEGDHALIVLRLNEVWPDGLSGRVTYGIRRLARPEGVAPGEMHEVELPL KGVAHEFSPGRRIRLAISTSYWPLVWPEPRLNAITLDPASLRFDLPGMPPEASHDQPAFGPAIHACPVPSQVLVPGEISR KVHQDLAGGKVELVSTSHRATWELGGLVMGGYGGHSYSVMPDDGASARARFFSVQTYEREALGWKIRLESSSEVSWQDGR MVLASHYEAFEGDEKVFARNWLHRIDY
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 74005; Mature: 74005
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYSVSVTSDRPAPFQQITIPLADGTVLHARLWLPQTPLADRVPLVLEWIPYRQSDGTA CCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCH LADSMMHGYFAEQGIAAARVDIRGSGNSDGLLHDEYLKQEQDDACEVIAWFARQDWCNGN HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCC VGLIGISWGGFAGLQIAARRPPALKCIITACSTDNRYTDDVHYMGGALLSDGMQWGSGLF EEEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHCCHHHCCHHH AQLGRPADPKHVGDRWREMWMNRLEGIKEPPLATWMQHTTYDDFWKHGSVCEDYDEIQCA HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHCEEE VWAVGGWVDGYTDPILRLMEKLSVPKKALIGPWTHMYPTWGQPGPQIGFLQEAMRWWRHW EEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LMDEDTGIMDEPQLTLWLGKDPKPDTRAPDIGGRWIGLPAWPPAAPAQTLFADDRRLASA HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCHHCCC PGPVEPEIVVDSPLSLGTQGGEWCPLDGGGNGPEFAGDARMDDGMSLCFDTTPLAEAFHL CCCCCCCEEECCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH VGMPVLRLRLAFEGDHALIVLRLNEVWPDGLSGRVTYGIRRLARPEGVAPGEMHEVELPL HCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCH KGVAHEFSPGRRIRLAISTSYWPLVWPEPRLNAITLDPASLRFDLPGMPPEASHDQPAFG HHHHHCCCCCCEEEEEEECCCCEEECCCCCCCEEEECHHHEEEECCCCCCCCCCCCCCCC PAIHACPVPSQVLVPGEISRKVHQDLAGGKVELVSTSHRATWELGGLVMGGYGGHSYSVM CCEECCCCCCCEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEC PDDGASARARFFSVQTYEREALGWKIRLESSSEVSWQDGRMVLASHYEAFEGDEKVFARN CCCCCCCCEEEEEEEEEHHHHCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHH WLHRIDY HHHHCCC >Mature Secondary Structure MQNYSVSVTSDRPAPFQQITIPLADGTVLHARLWLPQTPLADRVPLVLEWIPYRQSDGTA CCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCH LADSMMHGYFAEQGIAAARVDIRGSGNSDGLLHDEYLKQEQDDACEVIAWFARQDWCNGN HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCC VGLIGISWGGFAGLQIAARRPPALKCIITACSTDNRYTDDVHYMGGALLSDGMQWGSGLF EEEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHCCHHHCCHHH AQLGRPADPKHVGDRWREMWMNRLEGIKEPPLATWMQHTTYDDFWKHGSVCEDYDEIQCA HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHCEEE VWAVGGWVDGYTDPILRLMEKLSVPKKALIGPWTHMYPTWGQPGPQIGFLQEAMRWWRHW EEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LMDEDTGIMDEPQLTLWLGKDPKPDTRAPDIGGRWIGLPAWPPAAPAQTLFADDRRLASA HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCHHCCC PGPVEPEIVVDSPLSLGTQGGEWCPLDGGGNGPEFAGDARMDDGMSLCFDTTPLAEAFHL CCCCCCCEEECCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH VGMPVLRLRLAFEGDHALIVLRLNEVWPDGLSGRVTYGIRRLARPEGVAPGEMHEVELPL HCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCH KGVAHEFSPGRRIRLAISTSYWPLVWPEPRLNAITLDPASLRFDLPGMPPEASHDQPAFG HHHHHCCCCCCEEEEEEECCCCEEECCCCCCCEEEECHHHEEEECCCCCCCCCCCCCCCC PAIHACPVPSQVLVPGEISRKVHQDLAGGKVELVSTSHRATWELGGLVMGGYGGHSYSVM CCEECCCCCCCEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEC PDDGASARARFFSVQTYEREALGWKIRLESSSEVSWQDGRMVLASHYEAFEGDEKVFARN CCCCCCCCEEEEEEEEEHHHHCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHH WLHRIDY HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]