| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is isp [H]
Identifier: 77461918
GI number: 77461918
Start: 6385775
End: 6386956
Strand: Direct
Name: isp [H]
Synonym: Pfl01_5698
Alternate gene names: 77461918
Gene position: 6385775-6386956 (Clockwise)
Preceding gene: 77461917
Following gene: 77461921
Centisome position: 99.18
GC content: 53.98
Gene sequence:
>1182_bases TTGTCATTGCAAGGATCGCATATGGATAAGTACATCGTTCTACGAAAAACCTTCGGTCACACCAGCTCGATAAAGCGTAC TGCGTCCGCCGCTGTGTCGGACATCACGCTGGGTGTTGAGCACATCCCGCTGCATGCGTTGCCCACTATAAGTAATGATC CAGAAGTAGTGGCTTTAACTCCGCCGATGGCCACAAAACTAATCCAGCCCATGAAAAGCTCGACTGTCCAGCAGTCAAAG GGAGACTCTTGGGGAATAGCTGCCGTCGGCGCCGATCGATCGCCCTTTACCGGAGCCGACGTGACTGTCGCTGTACTGGA TACGGGCATAGACAAATCTCACCCTGCCTTTGCTGGTATGGATATTGTGGAGCACGACTTCACTGGCGAAGGCAACGGTG ACGTGAACGGCCACGGGACTCACTGCGCAGGAACAATCTTTGGTCGTGACGTAAACGGGCAGAGGATAGGCATAGCCCGG GGCGTCAGCCGCGCTGTCATCGGCAAAGTGATTGGACAGAACGATGGCGACTCCCAAATGATATTCGAAGGGCTTCAGTG GGCACTTCAACAACGAGCAAACATCATCTCAATGTCACTCGGCTTTGATTTTCCTGGCGAAGTCCAGAGCAAGGTCAATG ATGGATGGCCCGTGGATCTGGCCACTTCCCAAGCGCTGGAAACATACCGTGGAAACTTAAGGTTGCTCGATGCGCTGATG GGCCTGTTCAAAGCTCAATCTGCTTTCAACTTAGCACCTTTGGTGATTGCTGCAGCAGGTAATGAAAGCCGGCGCATGAT CAATAGCCAGTATAAAATTGCAGCGTCCCTACCGGCTTCTGCGCAGGACGTGATTTCTGTGGCAGCTGTTTCGCCCGCAA TGCAAATACAGTACGAAGTAGCAGATTTCTCCAATAGTTTCCCCCAGTTATCCGCCCCCGGCGTAGACATAGTATCCGCT TGGCCGGGTGGAGCTCTGCGCTCTTCTGACGGTACAAGTATGGCTTGCCCTCACGTTGCGGGGGTCGCTGCTCTATGGTG GCAGCGCGCAGTTGAAAGCAAATCTACGAACCGGGCTTGGGCCGTCGCCGCAAACCTCACCACGCACGCTCGACCCAACT GCTTCACAAGTTCATTTGACGCAAGCGACTTTGGCCACGGACTAGTCACAGCGCCTTTGTAA
Upstream 100 bases:
>100_bases CTATACGGACATTCTGAAGGCGTATGCCGATACCTTGGTGCCGATTGAACCACAGGTTTCGCTGCCTATCCGGGTATAAC AGCAATTCAAAATCCCAGGC
Downstream 100 bases:
>100_bases TCACGCTCGCGCTGCCGGGGCTCAGCCTCTTTTCCCAATCAATTACTAAGGAAAAATCGTGGAAGAGACGTCTGAAACAT CCGCTGAACGCTCGCTGCGA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: ISP-1 [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSLQGSHMDKYIVLRKTFGHTSSIKRTASAAVSDITLGVEHIPLHALPTISNDPEVVALTPPMATKLIQPMKSSTVQQSK GDSWGIAAVGADRSPFTGADVTVAVLDTGIDKSHPAFAGMDIVEHDFTGEGNGDVNGHGTHCAGTIFGRDVNGQRIGIAR GVSRAVIGKVIGQNDGDSQMIFEGLQWALQQRANIISMSLGFDFPGEVQSKVNDGWPVDLATSQALETYRGNLRLLDALM GLFKAQSAFNLAPLVIAAAGNESRRMINSQYKIAASLPASAQDVISVAAVSPAMQIQYEVADFSNSFPQLSAPGVDIVSA WPGGALRSSDGTSMACPHVAGVAALWWQRAVESKSTNRAWAVAANLTTHARPNCFTSSFDASDFGHGLVTAPL
Sequences:
>Translated_393_residues MSLQGSHMDKYIVLRKTFGHTSSIKRTASAAVSDITLGVEHIPLHALPTISNDPEVVALTPPMATKLIQPMKSSTVQQSK GDSWGIAAVGADRSPFTGADVTVAVLDTGIDKSHPAFAGMDIVEHDFTGEGNGDVNGHGTHCAGTIFGRDVNGQRIGIAR GVSRAVIGKVIGQNDGDSQMIFEGLQWALQQRANIISMSLGFDFPGEVQSKVNDGWPVDLATSQALETYRGNLRLLDALM GLFKAQSAFNLAPLVIAAAGNESRRMINSQYKIAASLPASAQDVISVAAVSPAMQIQYEVADFSNSFPQLSAPGVDIVSA WPGGALRSSDGTSMACPHVAGVAALWWQRAVESKSTNRAWAVAANLTTHARPNCFTSSFDASDFGHGLVTAPL >Mature_392_residues SLQGSHMDKYIVLRKTFGHTSSIKRTASAAVSDITLGVEHIPLHALPTISNDPEVVALTPPMATKLIQPMKSSTVQQSKG DSWGIAAVGADRSPFTGADVTVAVLDTGIDKSHPAFAGMDIVEHDFTGEGNGDVNGHGTHCAGTIFGRDVNGQRIGIARG VSRAVIGKVIGQNDGDSQMIFEGLQWALQQRANIISMSLGFDFPGEVQSKVNDGWPVDLATSQALETYRGNLRLLDALMG LFKAQSAFNLAPLVIAAAGNESRRMINSQYKIAASLPASAQDVISVAAVSPAMQIQYEVADFSNSFPQLSAPGVDIVSAW PGGALRSSDGTSMACPHVAGVAALWWQRAVESKSTNRAWAVAANLTTHARPNCFTSSFDASDFGHGLVTAPL
Specific function: Major intracellular protease produced by Bacillus subtilis [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319893, Length=266, Percent_Identity=31.5789473684211, Blast_Score=76, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 41397; Mature: 41266
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQGSHMDKYIVLRKTFGHTSSIKRTASAAVSDITLGVEHIPLHALPTISNDPEVVALT CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEECHHHCCCEEECCCCCCCCEEEEC PPMATKLIQPMKSSTVQQSKGDSWGIAAVGADRSPFTGADVTVAVLDTGIDKSHPAFAGM CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC DIVEHDFTGEGNGDVNGHGTHCAGTIFGRDVNGQRIGIARGVSRAVIGKVIGQNDGDSQM HHEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHH IFEGLQWALQQRANIISMSLGFDFPGEVQSKVNDGWPVDLATSQALETYRGNLRLLDALM HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHH GLFKAQSAFNLAPLVIAAAGNESRRMINSQYKIAASLPASAQDVISVAAVSPAMQIQYEV HHHHHHCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEE ADFSNSFPQLSAPGVDIVSAWPGGALRSSDGTSMACPHVAGVAALWWQRAVESKSTNRAW HHCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE AVAANLTTHARPNCFTSSFDASDFGHGLVTAPL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure SLQGSHMDKYIVLRKTFGHTSSIKRTASAAVSDITLGVEHIPLHALPTISNDPEVVALT CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEECHHHCCCEEECCCCCCCCEEEEC PPMATKLIQPMKSSTVQQSKGDSWGIAAVGADRSPFTGADVTVAVLDTGIDKSHPAFAGM CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC DIVEHDFTGEGNGDVNGHGTHCAGTIFGRDVNGQRIGIARGVSRAVIGKVIGQNDGDSQM HHEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHH IFEGLQWALQQRANIISMSLGFDFPGEVQSKVNDGWPVDLATSQALETYRGNLRLLDALM HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHH GLFKAQSAFNLAPLVIAAAGNESRRMINSQYKIAASLPASAQDVISVAAVSPAMQIQYEV HHHHHHCCCCCCEEEEEECCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEE ADFSNSFPQLSAPGVDIVSAWPGGALRSSDGTSMACPHVAGVAALWWQRAVESKSTNRAW HHCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE AVAANLTTHARPNCFTSSFDASDFGHGLVTAPL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3087947; 9384377 [H]