| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is osmC [C]
Identifier: 77461921
GI number: 77461921
Start: 6391591
End: 6392007
Strand: Direct
Name: osmC [C]
Synonym: Pfl01_5701
Alternate gene names: 77461921
Gene position: 6391591-6392007 (Clockwise)
Preceding gene: 77461918
Following gene: 77461925
Centisome position: 99.27
GC content: 50.12
Gene sequence:
>417_bases ATGACGGCTGAAAAAGTTCTCTATGTAGCGAACGTTCGAACCCATGGCACTCGCGACGGGGGTACATCACGTAGCGACGA TGGTGCTTTGGACATTCGGCATTCGCTACCTGGAAGTAAGGTTGGAGGAACCAACCCCGAACAATTGTTCGCTGCTGGTT GGTCCGCTTGTTTTGACGGAGCACTGGGTCTGGCGGCGGGAAAATTAAAGGTCAAATTACCGGATGACGTAACGATTGAT GCTCGAGTCGCGCTCTGTAAAGACGGTGATTCCTACTTCCTGAGTGCTCGACTGGACATTTCACTACCCGGGTTAGATCG CAATGTAGCCCTTAAACTGATAGATGCTGCACATCAAACCTGCCCATACTCAAAGGCTGTGCGCAATAACATTGAAGTGA CTCTTAACCTCGTATGA
Upstream 100 bases:
>100_bases TAAAAATAATTCTGTTTTGATTGATTCCCCATGACGAAAAAAGTCAAAGCATCGGAATGTAATGGTGCCCCTGCGCGGCG CATCCTATGAGGAGGAATGT
Downstream 100 bases:
>100_bases TGCCAGTAGGCTATGGATAGCAGCATCAGAGGCTGGGAAGAGTTCGAACAGTTCGGTTGTTTTTGACCAATAATGTTTGA TACCCCACTCCGACGGATAA
Product: OsmC-like protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTAEKVLYVANVRTHGTRDGGTSRSDDGALDIRHSLPGSKVGGTNPEQLFAAGWSACFDGALGLAAGKLKVKLPDDVTID ARVALCKDGDSYFLSARLDISLPGLDRNVALKLIDAAHQTCPYSKAVRNNIEVTLNLV
Sequences:
>Translated_138_residues MTAEKVLYVANVRTHGTRDGGTSRSDDGALDIRHSLPGSKVGGTNPEQLFAAGWSACFDGALGLAAGKLKVKLPDDVTID ARVALCKDGDSYFLSARLDISLPGLDRNVALKLIDAAHQTCPYSKAVRNNIEVTLNLV >Mature_137_residues TAEKVLYVANVRTHGTRDGGTSRSDDGALDIRHSLPGSKVGGTNPEQLFAAGWSACFDGALGLAAGKLKVKLPDDVTIDA RVALCKDGDSYFLSARLDISLPGLDRNVALKLIDAAHQTCPYSKAVRNNIEVTLNLV
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14624; Mature: 14493
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEKVLYVANVRTHGTRDGGTSRSDDGALDIRHSLPGSKVGGTNPEQLFAAGWSACFDG CCCCEEEEEEECEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC ALGLAAGKLKVKLPDDVTIDARVALCKDGDSYFLSARLDISLPGLDRNVALKLIDAAHQT CCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHEEEHHHHHC CPYSKAVRNNIEVTLNLV CCCHHHHCCCEEEEEEEC >Mature Secondary Structure TAEKVLYVANVRTHGTRDGGTSRSDDGALDIRHSLPGSKVGGTNPEQLFAAGWSACFDG CCCEEEEEEECEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC ALGLAAGKLKVKLPDDVTIDARVALCKDGDSYFLSARLDISLPGLDRNVALKLIDAAHQT CCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHEEEHHHHHC CPYSKAVRNNIEVTLNLV CCCHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226277 [H]