| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yefI [C]
Identifier: 77461906
GI number: 77461906
Start: 6371549
End: 6372916
Strand: Direct
Name: yefI [C]
Synonym: Pfl01_5686
Alternate gene names: 77461906
Gene position: 6371549-6372916 (Clockwise)
Preceding gene: 77461905
Following gene: 77461907
Centisome position: 98.96
GC content: 61.7
Gene sequence:
>1368_bases ATGACCCGCCTGCTGGTCGAATGCACCCACGTGTTCAAACACCCGAAGGTCAATTCGGGGATTCAGCGGGTGGTGCGCAA CGTCATCAAACAGCTGCCGCCGAGCGCCGAAGGGGTCGAATGCGTGCCGGTGGTTCTGCTCAAGGGCCAGTTGTACCGAG TGAAGCGTCTGGCGCCGCTGGATTCGCCGCTGTTCAATGCCATCGTCACGTTTGGCGAGCGTCTGGAACGGCTGGCTCAT CGTTTCTGGCAGCTGCATCAACGGCTGGACACCCGTTGCCGCACAAAACTGGCACGACGCGTGTTGTACGTCGGCTATCG CCTGACCTCGTTCGGTGCATTCGGGCTACCGCTGCGGCTGGTCGGGCTAGTCAATCGCTATCAAATGCCCCAACGCTGCG AGCCGCTGCAACACCAGCCGGGCGATCAACTGGTGCTGCTGGATTCGTCCTGGCATTCCGACTTTTTCCTGCATGCCGAG CGCCTCAAACAGGAAGGCATGGGCATCGTTGCGGTGATCTACGACCTGATTCCCTTGTCCCACCCGCAGTTCTATGACAC GCGGCTGGTCGAGGTGTACAGCGAGTGGTTCGACTGGATCGCCCGCAACGCCGACGGCTTCATGGCCATTTCCGCCACCG TGCGTGATCAGCTGCGTGCAGAAATGCAGCGTCGCCTCGGGTCGGCACAAGTCGGCAAACGCTGGTTCGACTACTTTCAC CTCGGTTCGGAGCTGGATCTGCAGAGCGTCGAGGCCGCCGTCGAACCACGTTTGCAACAGCTGTTCGCGACACCGGAGCC GATGTTCCTGATGGTCAGCACCATCGAGCCACGCAAGAACCACGACTATCTGCTGGATGCCTTCGACCATGCCTGGACGA ACGGCTCGAACGCCCGGTTGTGCATCGCCGGGCGCATTGGCTGGAAGTGCGACGCACTGCTGGCCCGGATCCATCATCAT CCCGAACTGAACCGACGCCTGTTCATGTTCAACGACTTGAGCGACACCAGCCTCGAACACGCCTACGCCCATGCCAGCGC GCTGGTGTTTCCCTCGTTCGTCGAAGGTTTCGGCCTGCCGCTGGTGGAAGCCATGCAGCGCGGGCTGCCGGCGATGGGCA GCGATATCCCGGTGTTTCGCGAAATCGGCGGTGAGTTCATGGCGTATTTCGATCTGCAATCGCCACAAAGCCTCGCCGAT CTGGTGCAAACCTTTGAGCGCAGCGGTCGATTCCCCGCCGCTCGCGATGTGAGTGACTGGCAATGGATCGGCTGGCGGGA AGCCAGCGCGCAACTGGCCGAGCGTACCGCGCGCCATGTGCTGGAGGCACCTCAGGTGCCGGCGAGGCAACATGCGCATA GCCCTTAA
Upstream 100 bases:
>100_bases ACGTGATCAACAACCGTCAGGAAGATTTCGTCGGCTGTTCCTGGCTGGGCGCCAGCACCTCGATCACCCGCCACGCGGAC AGCCTCGCGGAGCGTGCGCC
Downstream 100 bases:
>100_bases CGCCCGCATTCTCCAGGCACCGCGCACCGGCATCGGCCATTACGTGGCCGAACTGGTGAATGCCTTGCACGCTGAAACCG ATATCGAGCTGGCGCTGTTC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase; Mannosyltransferase A; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase WbpX; Glycosyl Transferase Group 1 Protein; Mannosyltransferase B; Bifunctional Glycosyltransferase; Mannosyl Transferase; Glycosyltransferase Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTRLLVECTHVFKHPKVNSGIQRVVRNVIKQLPPSAEGVECVPVVLLKGQLYRVKRLAPLDSPLFNAIVTFGERLERLAH RFWQLHQRLDTRCRTKLARRVLYVGYRLTSFGAFGLPLRLVGLVNRYQMPQRCEPLQHQPGDQLVLLDSSWHSDFFLHAE RLKQEGMGIVAVIYDLIPLSHPQFYDTRLVEVYSEWFDWIARNADGFMAISATVRDQLRAEMQRRLGSAQVGKRWFDYFH LGSELDLQSVEAAVEPRLQQLFATPEPMFLMVSTIEPRKNHDYLLDAFDHAWTNGSNARLCIAGRIGWKCDALLARIHHH PELNRRLFMFNDLSDTSLEHAYAHASALVFPSFVEGFGLPLVEAMQRGLPAMGSDIPVFREIGGEFMAYFDLQSPQSLAD LVQTFERSGRFPAARDVSDWQWIGWREASAQLAERTARHVLEAPQVPARQHAHSP
Sequences:
>Translated_455_residues MTRLLVECTHVFKHPKVNSGIQRVVRNVIKQLPPSAEGVECVPVVLLKGQLYRVKRLAPLDSPLFNAIVTFGERLERLAH RFWQLHQRLDTRCRTKLARRVLYVGYRLTSFGAFGLPLRLVGLVNRYQMPQRCEPLQHQPGDQLVLLDSSWHSDFFLHAE RLKQEGMGIVAVIYDLIPLSHPQFYDTRLVEVYSEWFDWIARNADGFMAISATVRDQLRAEMQRRLGSAQVGKRWFDYFH LGSELDLQSVEAAVEPRLQQLFATPEPMFLMVSTIEPRKNHDYLLDAFDHAWTNGSNARLCIAGRIGWKCDALLARIHHH PELNRRLFMFNDLSDTSLEHAYAHASALVFPSFVEGFGLPLVEAMQRGLPAMGSDIPVFREIGGEFMAYFDLQSPQSLAD LVQTFERSGRFPAARDVSDWQWIGWREASAQLAERTARHVLEAPQVPARQHAHSP >Mature_454_residues TRLLVECTHVFKHPKVNSGIQRVVRNVIKQLPPSAEGVECVPVVLLKGQLYRVKRLAPLDSPLFNAIVTFGERLERLAHR FWQLHQRLDTRCRTKLARRVLYVGYRLTSFGAFGLPLRLVGLVNRYQMPQRCEPLQHQPGDQLVLLDSSWHSDFFLHAER LKQEGMGIVAVIYDLIPLSHPQFYDTRLVEVYSEWFDWIARNADGFMAISATVRDQLRAEMQRRLGSAQVGKRWFDYFHL GSELDLQSVEAAVEPRLQQLFATPEPMFLMVSTIEPRKNHDYLLDAFDHAWTNGSNARLCIAGRIGWKCDALLARIHHHP ELNRRLFMFNDLSDTSLEHAYAHASALVFPSFVEGFGLPLVEAMQRGLPAMGSDIPVFREIGGEFMAYFDLQSPQSLADL VQTFERSGRFPAARDVSDWQWIGWREASAQLAERTARHVLEAPQVPARQHAHSP
Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52155; Mature: 52023
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLLVECTHVFKHPKVNSGIQRVVRNVIKQLPPSAEGVECVPVVLLKGQLYRVKRLAPL CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHCCC DSPLFNAIVTFGERLERLAHRFWQLHQRLDTRCRTKLARRVLYVGYRLTSFGAFGLPLRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VGLVNRYQMPQRCEPLQHQPGDQLVLLDSSWHSDFFLHAERLKQEGMGIVAVIYDLIPLS HHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC HPQFYDTRLVEVYSEWFDWIARNADGFMAISATVRDQLRAEMQRRLGSAQVGKRWFDYFH CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LGSELDLQSVEAAVEPRLQQLFATPEPMFLMVSTIEPRKNHDYLLDAFDHAWTNGSNARL CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEE CIAGRIGWKCDALLARIHHHPELNRRLFMFNDLSDTSLEHAYAHASALVFPSFVEGFGLP EEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCH LVEAMQRGLPAMGSDIPVFREIGGEFMAYFDLQSPQSLADLVQTFERSGRFPAARDVSDW HHHHHHCCCCCCCCCCHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC QWIGWREASAQLAERTARHVLEAPQVPARQHAHSP CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC >Mature Secondary Structure TRLLVECTHVFKHPKVNSGIQRVVRNVIKQLPPSAEGVECVPVVLLKGQLYRVKRLAPL CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHCCC DSPLFNAIVTFGERLERLAHRFWQLHQRLDTRCRTKLARRVLYVGYRLTSFGAFGLPLRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VGLVNRYQMPQRCEPLQHQPGDQLVLLDSSWHSDFFLHAERLKQEGMGIVAVIYDLIPLS HHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC HPQFYDTRLVEVYSEWFDWIARNADGFMAISATVRDQLRAEMQRRLGSAQVGKRWFDYFH CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LGSELDLQSVEAAVEPRLQQLFATPEPMFLMVSTIEPRKNHDYLLDAFDHAWTNGSNARL CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEE CIAGRIGWKCDALLARIHHHPELNRRLFMFNDLSDTSLEHAYAHASALVFPSFVEGFGLP EEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCH LVEAMQRGLPAMGSDIPVFREIGGEFMAYFDLQSPQSLADLVQTFERSGRFPAARDVSDW HHHHHHCCCCCCCCCCHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC QWIGWREASAQLAERTARHVLEAPQVPARQHAHSP CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA