| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cls [H]
Identifier: 77461885
GI number: 77461885
Start: 6345049
End: 6346488
Strand: Direct
Name: cls [H]
Synonym: Pfl01_5665
Alternate gene names: 77461885
Gene position: 6345049-6346488 (Clockwise)
Preceding gene: 77461883
Following gene: 77461891
Centisome position: 98.55
GC content: 61.32
Gene sequence:
>1440_bases ATGGATTATTTCGGACCGCACATTTTCGGTTATCTGATCGCCCTGATACACACCCTCGGCTCGATCGCCGCGATCCATGC CGTATTGACCGTCCGCACCGCCCAAGGCTCGATCGCCTGGGCGCTGTCGCTGATCTTCATTCCCTACCTCACCCTGATTC CTTATCTGGTGTTCGGCCGCAGCACCTTCGATGGCTACATCAAGGCCCGCCGCCAGGCCAACGAACAGATGCGCCAGGCG ATTTCCGAACTCAACTGGCGGCCGTGGGTGGAAGAAGCCCTGACCGCCCGCGCCTCGAATGCTTACGACTCATTGCGAGC GATGCCGAAGCTGGGACGCATGCCGTGCCTGGCCAACAATGAAGTGCGATTGCTGATCAACGGTGCCGCCACCTTCGAGG CGATTTTCCACGCAATCGACCAGGCGCGGGAAGCGGTGCTGATCCAGTTTTTCATCATTCACGACGATCGTCTTGGTCAG CGCCTACGCGACCTGCTGCTGAAAAAAGCGGCCGAAGGCGTGGTGATTCATTTGCTCTACGACCGCATCGGCAGCCACGC CCTGCCCCACAGCTACGTGCAAGCGCTGCGCGATGGCGGTGTCGAGGTCAAGGCGTTCGCCACCCGCAGCGGCTGGCTCA ATCGTTTCCAGGTGAATTTCCGCAACCACCGCAAGATCGTGGTGGTCGACGGGCTGATCGGGTTTGTCGGCGGGCACAAC GTAGGCGACGAATACATGGGTGAAAAGCCACCGCTGGCACCGTGGCGCGACACTCACGTTCAGGTGCGCGGCCCGGTGGT GGCGTGCATGCAGGAGTCATTTGCCGAAGACTGGTTCTGGGCCGCGCGGTCATTGCCGCCGCTGATCCTGCCGGACGCGT ACCCAGAGGACGGCGTGCTTTGCCAATTGCTCGCCAGCGGCCCGGCGGATGCTTACGAAACCTGCTCGCTGTTCTTCGTT GAGGCCATCCACGCCGCCACCGAACGCGTGTGGATCACCAGCCCCTACTTCATTCCTGACGAAGCCGTGTTCGCGGCGTT GCGCCTCGCAGTTTTGCGCGGGGTCGACGTGCGCCTGTTGCTGCCTTCGCGTCCCGACCACCGCATCGTCTACGCAGCCT CCAGCCTGTACGCCTTCGAAGCGGTACGCGCCGGCGTGCGGGTATTCCGCTATGAACCGGGTTTTCTGCATCAGAAGGTG GTGTTGATCGACAGTGAAATCAGCGCCATCGGCAGCGCCAATCTGGACAATCGTTCGTTCCGGCTTAATTTCGAGGTGAT GCTGCTGACCGTCGACAGCGAATTCGCCGCCAGCGTGGAACAGATGCTCAACGACGACTTCGCCCAGGCCTACGAGGTCG CCAAAGAAGAAAGCCGGGAGATCCACCGCCTGCAACAGGTCGGCATGCGGATCGCCCGGCTGATTTCACCGATTCTATAG
Upstream 100 bases:
>100_bases TTCGGTTCATGACCGGCGCTGGCAGCTTGAAAACAAATAGCGACAATCGCCATGGAACATGGTCTGTTAAGCATTGAATC TTCAGGAGCAAGGTTGCCCC
Downstream 100 bases:
>100_bases GTTCAAGGGTTGTAGATGTCGTCCCGGGTCCATGGCAGTTCATGGCTGCCGTCGGCATGGGCCTTCACGGCGAGGATCTG GTGCAGATTGATCCAGCCGC
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MDYFGPHIFGYLIALIHTLGSIAAIHAVLTVRTAQGSIAWALSLIFIPYLTLIPYLVFGRSTFDGYIKARRQANEQMRQA ISELNWRPWVEEALTARASNAYDSLRAMPKLGRMPCLANNEVRLLINGAATFEAIFHAIDQAREAVLIQFFIIHDDRLGQ RLRDLLLKKAAEGVVIHLLYDRIGSHALPHSYVQALRDGGVEVKAFATRSGWLNRFQVNFRNHRKIVVVDGLIGFVGGHN VGDEYMGEKPPLAPWRDTHVQVRGPVVACMQESFAEDWFWAARSLPPLILPDAYPEDGVLCQLLASGPADAYETCSLFFV EAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLLLPSRPDHRIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKV VLIDSEISAIGSANLDNRSFRLNFEVMLLTVDSEFAASVEQMLNDDFAQAYEVAKEESREIHRLQQVGMRIARLISPIL
Sequences:
>Translated_479_residues MDYFGPHIFGYLIALIHTLGSIAAIHAVLTVRTAQGSIAWALSLIFIPYLTLIPYLVFGRSTFDGYIKARRQANEQMRQA ISELNWRPWVEEALTARASNAYDSLRAMPKLGRMPCLANNEVRLLINGAATFEAIFHAIDQAREAVLIQFFIIHDDRLGQ RLRDLLLKKAAEGVVIHLLYDRIGSHALPHSYVQALRDGGVEVKAFATRSGWLNRFQVNFRNHRKIVVVDGLIGFVGGHN VGDEYMGEKPPLAPWRDTHVQVRGPVVACMQESFAEDWFWAARSLPPLILPDAYPEDGVLCQLLASGPADAYETCSLFFV EAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLLLPSRPDHRIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKV VLIDSEISAIGSANLDNRSFRLNFEVMLLTVDSEFAASVEQMLNDDFAQAYEVAKEESREIHRLQQVGMRIARLISPIL >Mature_479_residues MDYFGPHIFGYLIALIHTLGSIAAIHAVLTVRTAQGSIAWALSLIFIPYLTLIPYLVFGRSTFDGYIKARRQANEQMRQA ISELNWRPWVEEALTARASNAYDSLRAMPKLGRMPCLANNEVRLLINGAATFEAIFHAIDQAREAVLIQFFIIHDDRLGQ RLRDLLLKKAAEGVVIHLLYDRIGSHALPHSYVQALRDGGVEVKAFATRSGWLNRFQVNFRNHRKIVVVDGLIGFVGGHN VGDEYMGEKPPLAPWRDTHVQVRGPVVACMQESFAEDWFWAARSLPPLILPDAYPEDGVLCQLLASGPADAYETCSLFFV EAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLLLPSRPDHRIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKV VLIDSEISAIGSANLDNRSFRLNFEVMLLTVDSEFAASVEQMLNDDFAQAYEVAKEESREIHRLQQVGMRIARLISPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=464, Percent_Identity=26.0775862068966, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1787007, Length=343, Percent_Identity=31.7784256559767, Blast_Score=138, Evalue=9e-34, Organism=Escherichia coli, GI87081826, Length=402, Percent_Identity=26.6169154228856, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 53800; Mature: 53800
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00435 PEROXIDASE_1 ; PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYFGPHIFGYLIALIHTLGSIAAIHAVLTVRTAQGSIAWALSLIFIPYLTLIPYLVFGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC STFDGYIKARRQANEQMRQAISELNWRPWVEEALTARASNAYDSLRAMPKLGRMPCLANN CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EVRLLINGAATFEAIFHAIDQAREAVLIQFFIIHDDRLGQRLRDLLLKKAAEGVVIHLLY CEEEEEECHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEHHH DRIGSHALPHSYVQALRDGGVEVKAFATRSGWLNRFQVNFRNHRKIVVVDGLIGFVGGHN HHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECHHHHHCCCC VGDEYMGEKPPLAPWRDTHVQVRGPVVACMQESFAEDWFWAARSLPPLILPDAYPEDGVL CCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHH CQLLASGPADAYETCSLFFVEAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLL HHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE LPSRPDHRIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKVVLIDSEISAIGSANLDNRSF CCCCCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECHHHHHCCCCCCCCEE RLNFEVMLLTVDSEFAASVEQMLNDDFAQAYEVAKEESREIHRLQQVGMRIARLISPIL EEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYFGPHIFGYLIALIHTLGSIAAIHAVLTVRTAQGSIAWALSLIFIPYLTLIPYLVFGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCC STFDGYIKARRQANEQMRQAISELNWRPWVEEALTARASNAYDSLRAMPKLGRMPCLANN CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EVRLLINGAATFEAIFHAIDQAREAVLIQFFIIHDDRLGQRLRDLLLKKAAEGVVIHLLY CEEEEEECHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEHHH DRIGSHALPHSYVQALRDGGVEVKAFATRSGWLNRFQVNFRNHRKIVVVDGLIGFVGGHN HHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECHHHHHCCCC VGDEYMGEKPPLAPWRDTHVQVRGPVVACMQESFAEDWFWAARSLPPLILPDAYPEDGVL CCHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHH CQLLASGPADAYETCSLFFVEAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLL HHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE LPSRPDHRIVYAASSLYAFEAVRAGVRVFRYEPGFLHQKVVLIDSEISAIGSANLDNRSF CCCCCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECHHHHHCCCCCCCCEE RLNFEVMLLTVDSEFAASVEQMLNDDFAQAYEVAKEESREIHRLQQVGMRIARLISPIL EEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA