| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461774
Identifier: 77461774
GI number: 77461774
Start: 6221025
End: 6221765
Strand: Direct
Name: 77461774
Synonym: Pfl01_5553
Alternate gene names: NA
Gene position: 6221025-6221765 (Clockwise)
Preceding gene: 77461773
Following gene: 77461776
Centisome position: 96.62
GC content: 63.83
Gene sequence:
>741_bases ATGCGCAAAGCGCTTGCTCTCTCGCTGCTCGCCATTTTCCTCGGCGGTTGCGCCAGCAACCCTGCCGACCGTGACATCAG CGGCACCTGGATCAATCAGGTCGCCATCGATGCCGCTGCCAAGGGCGGCCCCCTGCGCGAAGCGCTTCAGGCCTACGGCC CGAACCTGGAGTGGGACGTCAACACCAAGGCCGGCCAGGCCCGCTACACCAACGGTTTTGAAAACGTGGAAGGTCGCTTG CTCGGCGAACAGTCCGGCGCCTGGAAAGTCGACTTCTATGGCAGCTCCGCCAGCGAGCTGAAACGTGACGGCGGCCAACT GCAGCAAGTCGCCAATGAAAACGAACCGGAACAGGTCTTCGACCGCGCGCAGATTCCGGTGCCGGAAGGCGCACCAATCG GCGCCAGCTTCGAACGCGCGCTGTATTCCGCCTATCTGGGCGGCAACTGGACGATCACCAGCGGCCAGGGCGAAGGCGCC ACCGTGCAGTTCCAGGCTGACGGCCAAGTCTCCGGCCTGCCGGGTGCCGACCGCTATGCCCTGTGTCTCGCCGGCGACTG CGCGTCGATGAGCAGCGGCAACGACAGCATGTGGTTGCAGCAGAACGGTCAGGGCAACAACTGGATCTTTGTGCGCAAGG GCAAGGAACTGGAAATCCTGCAGGCCGTGAACACGGCACTGGCGGACGAACAACCGCAGTTCACCCCGGGTGAGCGCAAG TGGTTGCTCGAGAAGCAGTGA
Upstream 100 bases:
>100_bases AATGGATGCCATTCTGGTCATCGAGTAATGCGCACGGCGCGGCCTCAGACGCCGCGCCGATTGCTCTGCGGTAAAGAAAA GGTTTTGAAAGGATTCCACC
Downstream 100 bases:
>100_bases TCGGCGCTTGAGACAAAAAAGGCGGGAGCAAACATTTGCTCCCGCCTTTTTGACACTCGAAAGTCAGCAACGCCCCTCTA GAATCGCGGCATACCCCTCA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRKALALSLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRL LGEQSGAWKVDFYGSSASELKRDGGQLQQVANENEPEQVFDRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGA TVQFQADGQVSGLPGADRYALCLAGDCASMSSGNDSMWLQQNGQGNNWIFVRKGKELEILQAVNTALADEQPQFTPGERK WLLEKQ
Sequences:
>Translated_246_residues MRKALALSLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRL LGEQSGAWKVDFYGSSASELKRDGGQLQQVANENEPEQVFDRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGA TVQFQADGQVSGLPGADRYALCLAGDCASMSSGNDSMWLQQNGQGNNWIFVRKGKELEILQAVNTALADEQPQFTPGERK WLLEKQ >Mature_246_residues MRKALALSLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRL LGEQSGAWKVDFYGSSASELKRDGGQLQQVANENEPEQVFDRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGA TVQFQADGQVSGLPGADRYALCLAGDCASMSSGNDSMWLQQNGQGNNWIFVRKGKELEILQAVNTALADEQPQFTPGERK WLLEKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26431; Mature: 26431
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKALALSLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDV CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEC NTKAGQARYTNGFENVEGRLLGEQSGAWKVDFYGSSASELKRDGGQLQQVANENEPEQVF CCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHCCHHHHHHHCCCCHHHHH DRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGATVQFQADGQVSGLPGADRYA HHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEE LCLAGDCASMSSGNDSMWLQQNGQGNNWIFVRKGKELEILQAVNTALADEQPQFTPGERK EEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC WLLEKQ EEECCC >Mature Secondary Structure MRKALALSLLAIFLGGCASNPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDV CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEC NTKAGQARYTNGFENVEGRLLGEQSGAWKVDFYGSSASELKRDGGQLQQVANENEPEQVF CCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHCCHHHHHHHCCCCHHHHH DRAQIPVPEGAPIGASFERALYSAYLGGNWTITSGQGEGATVQFQADGQVSGLPGADRYA HHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCEE LCLAGDCASMSSGNDSMWLQQNGQGNNWIFVRKGKELEILQAVNTALADEQPQFTPGERK EEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC WLLEKQ EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA