| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461756
Identifier: 77461756
GI number: 77461756
Start: 6205473
End: 6205835
Strand: Direct
Name: 77461756
Synonym: Pfl01_5535
Alternate gene names: NA
Gene position: 6205473-6205835 (Clockwise)
Preceding gene: 77461753
Following gene: 77461759
Centisome position: 96.38
GC content: 60.88
Gene sequence:
>363_bases ATGAACATCCAGAACGTCGTCGACATCAGCCTGACCACAACCGAAGCCGAACGCTATCGCCCGGCCCCGGCCAAAGTGCT CAAGGGCGATCCCGAACAAGCGGTGTTCAATCAGTACGACAGCCCTTGCGGGCAGATGGGCGTCGGCGTGTGGGAAGGTG CGGTCGGGCAGTGGACGGTGAACTACACCGAGCACGAATACTGCGAGATCCTGCAAGGCGTTTCGGTGCTGCGTGACGGC GAAGGCAATGCCAAGACCCTGCGCGTCGGTGATCGCTTCGTGATTCCGGCCGGTTTCCGTGGCACCTGGGAAGTGCTGGA AGCCTGCCGCAAGGTCTATGTGATCTTCGAACAGAAGGCCTGA
Upstream 100 bases:
>100_bases TTGACATAAGCTCGCCATACGGCCTTGCGGCGTTCAATTTAATCAACATAGACTTTGGCCCTTTCACGCCATCGCGCCGT CATTACGGGAGAAAACAACA
Downstream 100 bases:
>100_bases GGCCTTTCGCCAGGCAACAAAAAAGGCCCGTATCGTGAAATACGGGCCTTTTTCGTAAGTCGGGAAAAATCAATTACTTG ATTTTGCCTTCCTTGTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MNIQNVVDISLTTTEAERYRPAPAKVLKGDPEQAVFNQYDSPCGQMGVGVWEGAVGQWTVNYTEHEYCEILQGVSVLRDG EGNAKTLRVGDRFVIPAGFRGTWEVLEACRKVYVIFEQKA
Sequences:
>Translated_120_residues MNIQNVVDISLTTTEAERYRPAPAKVLKGDPEQAVFNQYDSPCGQMGVGVWEGAVGQWTVNYTEHEYCEILQGVSVLRDG EGNAKTLRVGDRFVIPAGFRGTWEVLEACRKVYVIFEQKA >Mature_120_residues MNIQNVVDISLTTTEAERYRPAPAKVLKGDPEQAVFNQYDSPCGQMGVGVWEGAVGQWTVNYTEHEYCEILQGVSVLRDG EGNAKTLRVGDRFVIPAGFRGTWEVLEACRKVYVIFEQKA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13398; Mature: 13398
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQNVVDISLTTTEAERYRPAPAKVLKGDPEQAVFNQYDSPCGQMGVGVWEGAVGQWTV CCCCCEEEEEEECCHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEE NYTEHEYCEILQGVSVLRDGEGNAKTLRVGDRFVIPAGFRGTWEVLEACRKVYVIFEQKA CCCCHHHHHHHHHHHHEECCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHEEEEEECCC >Mature Secondary Structure MNIQNVVDISLTTTEAERYRPAPAKVLKGDPEQAVFNQYDSPCGQMGVGVWEGAVGQWTV CCCCCEEEEEEECCHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEE NYTEHEYCEILQGVSVLRDGEGNAKTLRVGDRFVIPAGFRGTWEVLEACRKVYVIFEQKA CCCCHHHHHHHHHHHHEECCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA