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The map label for this gene is ymdC [H]

Identifier: 77461753

GI number: 77461753

Start: 6200825

End: 6202393

Strand: Direct

Name: ymdC [H]

Synonym: Pfl01_5532

Alternate gene names: 77461753

Gene position: 6200825-6202393 (Clockwise)

Preceding gene: 77461752

Following gene: 77461756

Centisome position: 96.31

GC content: 62.97

Gene sequence:

>1569_bases
GTGAGTTTCAGACAGCCCCTACTCGCTCTGCTGCTACTCGCCTCGTTCCTGGGCGGTTGTGCGTCCCTCGACGTACCGCG
CGAACCAAGCCAGGCCTTGCCGGCCTCCGACTCCGCTTTCGGCCGTTCGATCCTGGCCCAGGCGGCGCCCTACAAGGGCC
AGTCCGGCTTTCGCCTGCTGTCCAACAGCACCGAAGCTTTCACCGCCCGCGCCGAACTGATCCGCAACGCGCAACGCAGC
CTCGACTTGCAGTACTACATCGTCCATGACGGCATCAGTACGCGAATGCTGGTGGAAGAAGTGCTGAAGGCGGCCGATCG
TGGCGTGCGGGTGCGGATCCTGCTGGACGACACCACCAGCGACGGCCTCGATCTGATCATCGCCACGCTGGCGGCGCATC
CGCAGATCCAGATCCGTCTGTTCAATCCGCTGCACCTGGGGCGCAGTACCGGCGTGACCCGGGCGGCCGGGCGGCTGTTC
AATCTGTCGCTGCAACACCGGCGGATGCACAACAAGTTGTGGCTGGCGGACAACAGCGCGGCCATCGTCGGCGGACGCAA
TCTGGGCGATGAGTACTTCGATGCCGAGCCCAACCTGAACTTCACCGATATCGACATGCTCAGTGTCGGGCCGGTCGCCG
AGCAGCTCGGGCACAGTTTCGATCAGTACTGGAACAGCGCCCTGAGCAAGCCGATCGACGAGTTCCTCTCCAGCAAACCC
TCGGCCAAAGACCTGCAGAACACCCGCACGCGCCTGGAAGAATCCCTGGAAGAGACCCGCAAACAGAATCACGCGCTGTA
TCAGCAACTGATGACCTACCGCACCGATCCGCGCATGGACATCTGGCGCAAAGAGCTGATCTGGGCCTGGAACCAGGCGC
TGTGGGATGCACCGAGCAAAGTGCTGGCCAAGGGCGAACCCGATCCGCAATTGCTGCTGACGACCCAACTGGCGCCGGAG
CTGACCGGCGTCAGCAAGGACCTGGTGATGATTTCTGCCTACTTCGTGCCGGGGCAGCCGGGGCTGGTCTACTTGACCGG
CCGCGCCGATGCCGGGGTGGCGGTGAGCCTGCTGACCAACTCGCTGGAAGCCACCGACGTGCCAGCGGTGCACGGTGGTT
ATGCGCCGTATCGCAAGGCGCTGCTGGAACATGGCGTGAAGCTCTACGAACTCCGGCGTCAGCCTGGGGATAACGACGGC
AGCGGCCCGCACCTGTTTTACAGCAAGTCCTATCGCGGCTCGGATTCGAGCCTGCACAGCAAGGCGATGATCTTCGACGG
GAAGAAATCGTTCATCGGCTCATTCAATTTCGACCCGCGCTCGGTGCTGTGGAACACCGAAGTCGGGGTGCTGGTGGACA
GTCCCGAACTGGCAGCCCACGTGCGCGAACTGGCCTTGCAAGGCATGGCTCCTGCCTTGAGCTACGAAGCGAAATTGCAG
GACGGAAAAGTGGTGTGGGTCACCGAGGACAACGGCCAGATGCACACGCTGACCAAGGAGCCCGGCAACTGGTGGCGGCG
CTTCAATGCGTGGTTCAGCACTACGGTGGGACTGGAGCGGATGCTGTAG

Upstream 100 bases:

>100_bases
CGGTGCGGCAGCGATCAGACTGCTGGCCGAGGCCGACTGACTTTTACCGAGCAAAAAGCGTCCATATGCCCAACTCTGCC
GCCAACCGGAACGATCCCAC

Downstream 100 bases:

>100_bases
CAACCCGCTCCAGCCGGCTTATCAAGCGGGCTCCGGCACCTTGCCGAACGCCCCTTGCCGCGACAGCAGTATCACCAGCC
CGAACGCCCCGGCCGCCATC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSFRQPLLALLLLASFLGGCASLDVPREPSQALPASDSAFGRSILAQAAPYKGQSGFRLLSNSTEAFTARAELIRNAQRS
LDLQYYIVHDGISTRMLVEEVLKAADRGVRVRILLDDTTSDGLDLIIATLAAHPQIQIRLFNPLHLGRSTGVTRAAGRLF
NLSLQHRRMHNKLWLADNSAAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSALSKPIDEFLSSKP
SAKDLQNTRTRLEESLEETRKQNHALYQQLMTYRTDPRMDIWRKELIWAWNQALWDAPSKVLAKGEPDPQLLLTTQLAPE
LTGVSKDLVMISAYFVPGQPGLVYLTGRADAGVAVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLYELRRQPGDNDG
SGPHLFYSKSYRGSDSSLHSKAMIFDGKKSFIGSFNFDPRSVLWNTEVGVLVDSPELAAHVRELALQGMAPALSYEAKLQ
DGKVVWVTEDNGQMHTLTKEPGNWWRRFNAWFSTTVGLERML

Sequences:

>Translated_522_residues
MSFRQPLLALLLLASFLGGCASLDVPREPSQALPASDSAFGRSILAQAAPYKGQSGFRLLSNSTEAFTARAELIRNAQRS
LDLQYYIVHDGISTRMLVEEVLKAADRGVRVRILLDDTTSDGLDLIIATLAAHPQIQIRLFNPLHLGRSTGVTRAAGRLF
NLSLQHRRMHNKLWLADNSAAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSALSKPIDEFLSSKP
SAKDLQNTRTRLEESLEETRKQNHALYQQLMTYRTDPRMDIWRKELIWAWNQALWDAPSKVLAKGEPDPQLLLTTQLAPE
LTGVSKDLVMISAYFVPGQPGLVYLTGRADAGVAVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLYELRRQPGDNDG
SGPHLFYSKSYRGSDSSLHSKAMIFDGKKSFIGSFNFDPRSVLWNTEVGVLVDSPELAAHVRELALQGMAPALSYEAKLQ
DGKVVWVTEDNGQMHTLTKEPGNWWRRFNAWFSTTVGLERML
>Mature_521_residues
SFRQPLLALLLLASFLGGCASLDVPREPSQALPASDSAFGRSILAQAAPYKGQSGFRLLSNSTEAFTARAELIRNAQRSL
DLQYYIVHDGISTRMLVEEVLKAADRGVRVRILLDDTTSDGLDLIIATLAAHPQIQIRLFNPLHLGRSTGVTRAAGRLFN
LSLQHRRMHNKLWLADNSAAIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSALSKPIDEFLSSKPS
AKDLQNTRTRLEESLEETRKQNHALYQQLMTYRTDPRMDIWRKELIWAWNQALWDAPSKVLAKGEPDPQLLLTTQLAPEL
TGVSKDLVMISAYFVPGQPGLVYLTGRADAGVAVSLLTNSLEATDVPAVHGGYAPYRKALLEHGVKLYELRRQPGDNDGS
GPHLFYSKSYRGSDSSLHSKAMIFDGKKSFIGSFNFDPRSVLWNTEVGVLVDSPELAAHVRELALQGMAPALSYEAKLQD
GKVVWVTEDNGQMHTLTKEPGNWWRRFNAWFSTTVGLERML

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=493, Percent_Identity=36.105476673428, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58021; Mature: 57889

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRQPLLALLLLASFLGGCASLDVPREPSQALPASDSAFGRSILAQAAPYKGQSGFRLL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE
SNSTEAFTARAELIRNAQRSLDLQYYIVHDGISTRMLVEEVLKAADRGVRVRILLDDTTS
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
DGLDLIIATLAAHPQIQIRLFNPLHLGRSTGVTRAAGRLFNLSLQHRRMHNKLWLADNSA
CCHHHHHHHHHCCCEEEEEEECCHHCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEECCCE
AIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSALSKPIDEFLSSKP
EEEECCCCCHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAKDLQNTRTRLEESLEETRKQNHALYQQLMTYRTDPRMDIWRKELIWAWNQALWDAPSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH
VLAKGEPDPQLLLTTQLAPELTGVSKDLVMISAYFVPGQPGLVYLTGRADAGVAVSLLTN
HHHCCCCCCCEEEEECCCHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEHHHHHC
SLEATDVPAVHGGYAPYRKALLEHGVKLYELRRQPGDNDGSGPHLFYSKSYRGSDSSLHS
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCC
KAMIFDGKKSFIGSFNFDPRSVLWNTEVGVLVDSPELAAHVRELALQGMAPALSYEAKLQ
EEEEECCCHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCHHCHHEEEC
DGKVVWVTEDNGQMHTLTKEPGNWWRRFNAWFSTTVGLERML
CCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFRQPLLALLLLASFLGGCASLDVPREPSQALPASDSAFGRSILAQAAPYKGQSGFRLL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE
SNSTEAFTARAELIRNAQRSLDLQYYIVHDGISTRMLVEEVLKAADRGVRVRILLDDTTS
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
DGLDLIIATLAAHPQIQIRLFNPLHLGRSTGVTRAAGRLFNLSLQHRRMHNKLWLADNSA
CCHHHHHHHHHCCCEEEEEEECCHHCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEECCCE
AIVGGRNLGDEYFDAEPNLNFTDIDMLSVGPVAEQLGHSFDQYWNSALSKPIDEFLSSKP
EEEECCCCCHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SAKDLQNTRTRLEESLEETRKQNHALYQQLMTYRTDPRMDIWRKELIWAWNQALWDAPSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH
VLAKGEPDPQLLLTTQLAPELTGVSKDLVMISAYFVPGQPGLVYLTGRADAGVAVSLLTN
HHHCCCCCCCEEEEECCCHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEHHHHHC
SLEATDVPAVHGGYAPYRKALLEHGVKLYELRRQPGDNDGSGPHLFYSKSYRGSDSSLHS
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCC
KAMIFDGKKSFIGSFNFDPRSVLWNTEVGVLVDSPELAAHVRELALQGMAPALSYEAKLQ
EEEEECCCHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCHHCHHEEEC
DGKVVWVTEDNGQMHTLTKEPGNWWRRFNAWFSTTVGLERML
CCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]